RNA–Protein interactions for RNA: ENST00000338700.9

TRIM2-201, Transcript of tripartite motif containing 2, humanhuman

TSL 1 (best) BASIC

Gene TRIM2, Length 6,735 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM2-201ENST00000338700 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP6.36□□□□□ -1.39
TRIM2-201ENST00000338700 PSMG4Q5JS54 123 aa6.36□□□□□ -1.39
TRIM2-201ENST00000338700 MRPL52Q86TS9 123 aaKnown RBP6.36□□□□□ -1.39
TRIM2-201ENST00000338700 RNF222A6NCQ9 220 aa6.36□□□□□ -1.39
TRIM2-201ENST00000338700 CRPP02741 224 aa6.36□□□□□ -1.39
TRIM2-201ENST00000338700 C15orf32Q32M92 178 aa6.36□□□□□ -1.39
TRIM2-201ENST00000338700 CYSLTR1Q9Y271 337 aa6.36□□□□□ -1.39
TRIM2-201ENST00000338700 LY6G6EA0A0G2JKS1 128 aa6.36□□□□□ -1.39
TRIM2-201ENST00000338700 CD33P20138 364 aa6.36□□□□□ -1.39
TRIM2-201ENST00000338700 C3orf36Q3SXR2 165 aa6.36□□□□□ -1.39
TRIM2-201ENST00000338700 TMEM155Q4W5P6 130 aa6.36□□□□□ -1.39
TRIM2-201ENST00000338700 DTX1Q86Y01 620 aa6.36□□□□□ -1.39
TRIM2-201ENST00000338700 COX11Q9Y6N1 276 aa6.36□□□□□ -1.39
TRIM2-201ENST00000338700 U3KQA8 63 aa6.36□□□□□ -1.39
TRIM2-201ENST00000338700 HIGD1CA8MV81 97 aa6.35□□□□□ -1.39
TRIM2-201ENST00000338700 BUB1B-PAK6H3BSN5 160 aa6.35□□□□□ -1.39
TRIM2-201ENST00000338700 CD55P08174 381 aa6.35□□□□□ -1.39
TRIM2-201ENST00000338700 SELLP14151 372 aa6.35□□□□□ -1.39
TRIM2-201ENST00000338700 NR2C2APQ86WQ0 139 aa6.35□□□□□ -1.39
TRIM2-201ENST00000338700 PNRC2Q9NPJ4 139 aaKnown RBP6.35□□□□□ -1.39
TRIM2-201ENST00000338700 ARID1AO14497 2285 aa6.35□□□□□ -1.39
TRIM2-201ENST00000338700 IGKV1-27A0A075B6S5 117 aa6.35□□□□□ -1.39
TRIM2-201ENST00000338700 A0A087WWC5 75 aa6.35□□□□□ -1.39
TRIM2-201ENST00000338700 PYYP10082 97 aa6.35□□□□□ -1.39
TRIM2-201ENST00000338700 IFI27P40305 119 aaPredicted RBP6.35□□□□□ -1.39
TRIM2-201ENST00000338700 ID3Q02535 119 aa6.35□□□□□ -1.39
TRIM2-201ENST00000338700 BRD3OSQ6XYD6 125 aa6.35□□□□□ -1.39
TRIM2-201ENST00000338700 VGLL1Q99990 258 aa6.35□□□□□ -1.39
TRIM2-201ENST00000338700 CARHSP1Q9Y2V2 147 aaKnown RBP6.35□□□□□ -1.39
TRIM2-201ENST00000338700 TRAV8-6A0A0B4J262 113 aa6.35□□□□□ -1.39
TRIM2-201ENST00000338700 RBMY1BA6NDE4 496 aaKnown RBP6.35□□□□□ -1.39
TRIM2-201ENST00000338700 RBMY1EA6NEQ0 496 aaKnown RBP6.35□□□□□ -1.39
TRIM2-201ENST00000338700 A8MXK9 166 aa6.35□□□□□ -1.39
TRIM2-201ENST00000338700 RBMY1DP0C7P1 496 aaKnown RBP6.35□□□□□ -1.39
TRIM2-201ENST00000338700 RBMY1A1P0DJD3 496 aaKnown RBP6.35□□□□□ -1.39
TRIM2-201ENST00000338700 RBMY1CP0DJD4 496 aa6.35□□□□□ -1.39
TRIM2-201ENST00000338700 Q96MF0 132 aa6.35□□□□□ -1.39
TRIM2-201ENST00000338700 RNF126Q9BV68 326 aa6.35□□□□□ -1.39
TRIM2-201ENST00000338700 DPRXA6NFQ7 191 aa6.35□□□□□ -1.39
TRIM2-201ENST00000338700 ERVK11-1P61568 191 aa6.35□□□□□ -1.39
TRIM2-201ENST00000338700 EFNB3Q15768 340 aa6.35□□□□□ -1.39
TRIM2-201ENST00000338700 TEX38Q6PEX7 206 aa6.35□□□□□ -1.39
TRIM2-201ENST00000338700 ZNF474Q6S9Z5 364 aaPredicted RBP6.35□□□□□ -1.39
TRIM2-201ENST00000338700 UBE2DNLQ8IWF7 75 aa6.35□□□□□ -1.39
TRIM2-201ENST00000338700 USMG5Q96IX5 58 aa6.35□□□□□ -1.39
TRIM2-201ENST00000338700 FAM223BA6NKX1 122 aa6.35□□□□□ -1.39
TRIM2-201ENST00000338700 LILRA1O75019 489 aa6.35□□□□□ -1.39
TRIM2-201ENST00000338700 SRSF4Q08170 494 aaKnown RBP6.35□□□□□ -1.39
TRIM2-201ENST00000338700 FAM223AQ8IWN6 122 aa6.35□□□□□ -1.39
TRIM2-201ENST00000338700 GFI1Q99684 422 aa6.35□□□□□ -1.39
TRIM2-201ENST00000338700 GATA3P23771 443 aa6.34□□□□□ -1.39
TRIM2-201ENST00000338700 COL8A2P25067 703 aa6.34□□□□□ -1.39
TRIM2-201ENST00000338700 IGKV1D-8A0A087WSZ0 117 aa6.34□□□□□ -1.39
TRIM2-201ENST00000338700 H3BUT2 72 aa6.34□□□□□ -1.39
TRIM2-201ENST00000338700 PSPNO60542 156 aa6.34□□□□□ -1.39
TRIM2-201ENST00000338700 C5orf64Q2M2E5 130 aa6.34□□□□□ -1.39
TRIM2-201ENST00000338700 SSBP4Q9BWG4 385 aaPredicted RBP6.34□□□□□ -1.39
TRIM2-201ENST00000338700 BEX4Q9NWD9 120 aaPredicted RBP6.34□□□□□ -1.39
TRIM2-201ENST00000338700 WDR83OSQ9Y284 106 aa6.34□□□□□ -1.39
TRIM2-201ENST00000338700 RNF114Q9Y508 228 aa6.34□□□□□ -1.39
TRIM2-201ENST00000338700 HEATR5BQ9P2D3 2071 aa6.34□□□□□ -1.39
TRIM2-201ENST00000338700 F2Z2F3 143 aa6.34□□□□□ -1.39
TRIM2-201ENST00000338700 H0YJW9 148 aa6.34□□□□□ -1.39
TRIM2-201ENST00000338700 NEUROG1Q92886 237 aa6.34□□□□□ -1.39
TRIM2-201ENST00000338700 PRADC1Q9BSG0 188 aa6.34□□□□□ -1.39
TRIM2-201ENST00000338700 UBE2V1Q13404 147 aa6.34□□□□□ -1.39
TRIM2-201ENST00000338700 ATP6V0BQ99437 205 aa6.34□□□□□ -1.39
TRIM2-201ENST00000338700 E7EQL1 145 aa6.34□□□□□ -1.4
TRIM2-201ENST00000338700 BTCP35070 178 aa6.34□□□□□ -1.4
TRIM2-201ENST00000338700 RPL23P62829 140 aaKnown RBP6.34□□□□□ -1.4
TRIM2-201ENST00000338700 SRSF1Q07955 248 aaKnown RBP eCLIP6.34□□□□□ -1.4
TRIM2-201ENST00000338700 RNF166Q96A37 237 aaPredicted RBP6.34□□□□□ -1.4
TRIM2-201ENST00000338700 IMMP2LQ96T52 175 aa6.34□□□□□ -1.4
TRIM2-201ENST00000338700 BPESC1Q9GZL8 116 aa6.34□□□□□ -1.4
TRIM2-201ENST00000338700 OSTCQ9NRP0 149 aa6.34□□□□□ -1.4
TRIM2-201ENST00000338700 APC2O95996 2303 aa6.34□□□□□ -1.4
TRIM2-201ENST00000338700 TRBV6-6A0A0A6YYG2 114 aa6.33□□□□□ -1.4
TRIM2-201ENST00000338700 OR5A1Q8NGJ0 315 aa6.33□□□□□ -1.4
TRIM2-201ENST00000338700 OR9G4Q8NGQ1 327 aa6.33□□□□□ -1.4
TRIM2-201ENST00000338700 RNASE7Q9H1E1 156 aaKnown RBP6.33□□□□□ -1.4
TRIM2-201ENST00000338700 FOXL2NBQ6ZUU3 175 aa6.33□□□□□ -1.4
TRIM2-201ENST00000338700 TTC9CQ8N5M4 171 aa6.33□□□□□ -1.4
TRIM2-201ENST00000338700 TRGV9Q99603 122 aa6.33□□□□□ -1.4
TRIM2-201ENST00000338700 EP300Q09472 2414 aaPredicted RBP6.33□□□□□ -1.4
TRIM2-201ENST00000338700 ITGB1BP1O14713 200 aa6.33□□□□□ -1.4
TRIM2-201ENST00000338700 NDUFA3O95167 84 aa6.33□□□□□ -1.4
TRIM2-201ENST00000338700 PIP4P2Q8N4L2 257 aa6.33□□□□□ -1.4
TRIM2-201ENST00000338700 DEFB121Q5J5C9 76 aa6.33□□□□□ -1.4
TRIM2-201ENST00000338700 Q6P435 159 aa6.33□□□□□ -1.4
TRIM2-201ENST00000338700 KLHL30-AS1Q8NEE0 82 aa6.33□□□□□ -1.4
TRIM2-201ENST00000338700 PPBPP02775 128 aa6.33□□□□□ -1.4
TRIM2-201ENST00000338700 C10orf55Q5SWW7 151 aa6.33□□□□□ -1.4
TRIM2-201ENST00000338700 ST6GALNAC6Q969X2 333 aa6.33□□□□□ -1.4
TRIM2-201ENST00000338700 SS18L2Q9UHA2 77 aa6.32□□□□□ -1.4
TRIM2-201ENST00000338700 TRAV8-2A0A0B4J237 113 aa6.32□□□□□ -1.4
TRIM2-201ENST00000338700 ZNF415Q09FC8 603 aa6.32□□□□□ -1.4
TRIM2-201ENST00000338700 SLC25A39Q9BZJ4 359 aaPredicted RBP6.32□□□□□ -1.4
TRIM2-201ENST00000338700 CACNA1EQ15878 2313 aa6.32□□□□□ -1.4
TRIM2-201ENST00000338700 IGKV1D-17A0A075B6S4 117 aa6.32□□□□□ -1.4
TRIM2-201ENST00000338700 RNF223E7ERA6 249 aa6.32□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms