RNA–Protein interactions for RNA: ENST00000338546.9

HPS1-202, Transcript of HPS1, biogenesis of lysosomal organelles complex 3 subunit 1, humanhuman

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Gene HPS1, Length 1,580 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS1-202ENST00000338546 GAR1Q9NY12 217 aaKnown RBP12.77□□□□□ -0.37
HPS1-202ENST00000338546 MRPL27Q9P0M9 148 aaKnown RBP12.77□□□□□ -0.37
HPS1-202ENST00000338546 PTPN13Q12923 2485 aa12.76□□□□□ -0.37
HPS1-202ENST00000338546 TRBV9A0A0B4J1U6 114 aa12.76□□□□□ -0.37
HPS1-202ENST00000338546 NDUFB4O95168 129 aa12.76□□□□□ -0.37
HPS1-202ENST00000338546 OR2C1O95371 312 aa12.76□□□□□ -0.37
HPS1-202ENST00000338546 BRI3O95415 125 aa12.76□□□□□ -0.37
HPS1-202ENST00000338546 TGFAP01135 160 aa12.76□□□□□ -0.37
HPS1-202ENST00000338546 AVPP01185 164 aa12.76□□□□□ -0.37
HPS1-202ENST00000338546 AKR1C3P42330 323 aa12.76□□□□□ -0.37
HPS1-202ENST00000338546 UBE2L3P68036 154 aaKnown RBP12.76□□□□□ -0.37
HPS1-202ENST00000338546 TMEM14CQ9P0S9 112 aa12.76□□□□□ -0.37
HPS1-202ENST00000338546 RNF24Q9Y225 148 aa12.76□□□□□ -0.37
HPS1-202ENST00000338546 LY96Q9Y6Y9 160 aa12.76□□□□□ -0.37
HPS1-202ENST00000338546 TRAV5A0A0B4J249 113 aa12.75□□□□□ -0.37
HPS1-202ENST00000338546 RNF223E7ERA6 249 aa12.75□□□□□ -0.37
HPS1-202ENST00000338546 NDUFB8O95169 186 aa12.75□□□□□ -0.37
HPS1-202ENST00000338546 RPL23P62829 140 aaKnown RBP12.75□□□□□ -0.37
HPS1-202ENST00000338546 RNF212Q495C1 297 aa12.75□□□□□ -0.37
HPS1-202ENST00000338546 MORN5Q5VZ52 161 aa12.75□□□□□ -0.37
HPS1-202ENST00000338546 NECAP1Q8NC96 275 aa12.75□□□□□ -0.37
HPS1-202ENST00000338546 FBXL7Q9UJT9 491 aa12.75□□□□□ -0.37
HPS1-202ENST00000338546 ABCA1O95477 2261 aa12.74□□□□□ -0.37
HPS1-202ENST00000338546 WI2-2373I1.2A0A1W2PRP0 233 aa12.74□□□□□ -0.37
HPS1-202ENST00000338546 C9JCJ5 164 aa12.74□□□□□ -0.37
HPS1-202ENST00000338546 HAX1O00165 279 aa12.74□□□□□ -0.37
HPS1-202ENST00000338546 AMY1AP04745 511 aa12.74□□□□□ -0.37
HPS1-202ENST00000338546 IGF1P05019 195 aa12.74□□□□□ -0.37
HPS1-202ENST00000338546 IGHV4-31P0DP07 118 aa12.74□□□□□ -0.37
HPS1-202ENST00000338546 FOLR2P14207 255 aa12.74□□□□□ -0.37
HPS1-202ENST00000338546 S100A7P31151 101 aa12.74□□□□□ -0.37
HPS1-202ENST00000338546 C9orf139Q6ZV77 190 aa12.74□□□□□ -0.37
HPS1-202ENST00000338546 Q8WTZ3 238 aa12.74□□□□□ -0.37
HPS1-202ENST00000338546 FXYD5Q96DB9 178 aa12.74□□□□□ -0.37
HPS1-202ENST00000338546 ANAPC16Q96DE5 110 aa12.74□□□□□ -0.37
HPS1-202ENST00000338546 GSX1Q9H4S2 264 aaPredicted RBP12.74□□□□□ -0.37
HPS1-202ENST00000338546 CHD6Q8TD26 2715 aa12.73□□□□□ -0.37
HPS1-202ENST00000338546 F8W735 103 aaPredicted RBP12.73□□□□□ -0.37
HPS1-202ENST00000338546 H3BUX3 64 aa12.73□□□□□ -0.37
HPS1-202ENST00000338546 CLDN34H7C241 214 aa12.73□□□□□ -0.37
HPS1-202ENST00000338546 OR2J3O76001 311 aa12.73□□□□□ -0.37
HPS1-202ENST00000338546 OR10J4P0C629 311 aa12.73□□□□□ -0.37
HPS1-202ENST00000338546 CD99P14209 185 aa12.73□□□□□ -0.37
HPS1-202ENST00000338546 LYZP61626 148 aa12.73□□□□□ -0.37
HPS1-202ENST00000338546 ADIRFQ15847 76 aa12.73□□□□□ -0.37
HPS1-202ENST00000338546 ECSCRQ19T08 205 aa12.73□□□□□ -0.37
HPS1-202ENST00000338546 Q56UQ5 140 aa12.73□□□□□ -0.37
HPS1-202ENST00000338546 C19orf54Q5BKX5 351 aa12.73□□□□□ -0.37
HPS1-202ENST00000338546 ZNF343Q6P1L6 599 aa12.73□□□□□ -0.37
HPS1-202ENST00000338546 TMEM219Q86XT9 240 aa12.73□□□□□ -0.37
HPS1-202ENST00000338546 ZNF491Q8N8L2 437 aa12.73□□□□□ -0.37
HPS1-202ENST00000338546 YPEL4Q96NS1 127 aa12.73□□□□□ -0.37
HPS1-202ENST00000338546 ZNF580Q9UK33 172 aa12.73□□□□□ -0.37
HPS1-202ENST00000338546 UTP20O75691 2785 aaKnown RBP12.73□□□□□ -0.37
HPS1-202ENST00000338546 SCO2A0A1W2PP80 73 aa12.73□□□□□ -0.37
HPS1-202ENST00000338546 FSHBP01225 129 aa12.73□□□□□ -0.37
HPS1-202ENST00000338546 IGHG2P01859 326 aa12.73□□□□□ -0.37
HPS1-202ENST00000338546 KIAA0141Q14154 515 aaPredicted RBP12.73□□□□□ -0.37
HPS1-202ENST00000338546 HIST1H2BAQ96A08 127 aa12.73□□□□□ -0.37
HPS1-202ENST00000338546 RNF125Q96EQ8 232 aa12.73□□□□□ -0.37
HPS1-202ENST00000338546 SLC25A39Q9BZJ4 359 aaPredicted RBP12.73□□□□□ -0.37
HPS1-202ENST00000338546 ASH1LQ9NR48 2969 aaKnown RBP12.72□□□□□ -0.37
HPS1-202ENST00000338546 TRAV41A0A0B4J266 112 aa12.72□□□□□ -0.37
HPS1-202ENST00000338546 H3BUA1 57 aa12.72□□□□□ -0.37
HPS1-202ENST00000338546 LINC01551Q86U37 167 aa12.72□□□□□ -0.37
HPS1-202ENST00000338546 ZNF502Q8TBZ5 544 aa12.72□□□□□ -0.37
HPS1-202ENST00000338546 SHANK2-AS3Q9BTD1 123 aa12.72□□□□□ -0.37
HPS1-202ENST00000338546 NAV2Q8IVL1 2488 aa12.71□□□□□ -0.37
HPS1-202ENST00000338546 GGTLC3B5MD39 225 aa12.71□□□□□ -0.37
HPS1-202ENST00000338546 PYYP10082 97 aa12.71□□□□□ -0.37
HPS1-202ENST00000338546 GP9P14770 177 aa12.71□□□□□ -0.37
HPS1-202ENST00000338546 ATF4P18848 351 aaPredicted RBP12.71□□□□□ -0.37
HPS1-202ENST00000338546 SUMO1P63165 101 aaKnown RBP12.71□□□□□ -0.37
HPS1-202ENST00000338546 RHOGP84095 191 aa12.71□□□□□ -0.37
HPS1-202ENST00000338546 CYB5R2Q6BCY4 276 aa12.71□□□□□ -0.37
HPS1-202ENST00000338546 KRTAP1-3Q8IUG1 177 aa12.71□□□□□ -0.37
HPS1-202ENST00000338546 OR5R1Q8NH85 324 aa12.71□□□□□ -0.37
HPS1-202ENST00000338546 PRRC2AP48634 2157 aaKnown RBP12.7□□□□□ -0.38
HPS1-202ENST00000338546 FBN2P35556 2912 aa12.7□□□□□ -0.38
HPS1-202ENST00000338546 TRBV7-1A0A0A6YYK4 115 aa12.7□□□□□ -0.38
HPS1-202ENST00000338546 FAM223BA6NKX1 122 aa12.7□□□□□ -0.38
HPS1-202ENST00000338546 H3BRN7 92 aa12.7□□□□□ -0.38
HPS1-202ENST00000338546 PPP1R2P9O14990 202 aa12.7□□□□□ -0.38
HPS1-202ENST00000338546 CTSGP08311 255 aa12.7□□□□□ -0.38
HPS1-202ENST00000338546 NBEAP1P0C6P0 100 aa12.7□□□□□ -0.38
HPS1-202ENST00000338546 MYCNOSP40205 109 aa12.7□□□□□ -0.38
HPS1-202ENST00000338546 C15orf32Q32M92 178 aa12.7□□□□□ -0.38
HPS1-202ENST00000338546 FAM223AQ8IWN6 122 aa12.7□□□□□ -0.38
HPS1-202ENST00000338546 TEX29Q8N6K0 151 aa12.7□□□□□ -0.38
HPS1-202ENST00000338546 ISOC2Q96AB3 205 aa12.7□□□□□ -0.38
HPS1-202ENST00000338546 EEF1AKMT3Q96AZ1 226 aa12.7□□□□□ -0.38
HPS1-202ENST00000338546 Q96MF0 132 aa12.7□□□□□ -0.38
HPS1-202ENST00000338546 CRYBG3Q68DQ2 2970 aa12.69□□□□□ -0.38
HPS1-202ENST00000338546 HELTA6NFD8 242 aa12.69□□□□□ -0.38
HPS1-202ENST00000338546 LINC01548A6NM66 108 aa12.69□□□□□ -0.38
HPS1-202ENST00000338546 G3V318 75 aa12.69□□□□□ -0.38
HPS1-202ENST00000338546 IL4P05112 153 aa12.69□□□□□ -0.38
HPS1-202ENST00000338546 HIST1H1EP10412 219 aaKnown RBP12.69□□□□□ -0.38
HPS1-202ENST00000338546 TAS2R60P59551 318 aa12.69□□□□□ -0.38
HPS1-202ENST00000338546 FAM24BQ8N5W8 94 aa12.69□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms