RNA–Protein interactions for RNA: ENST00000327304.9

EXOSC3-201, Transcript of exosome component 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene EXOSC3, Length 1,806 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC3-201ENST00000327304 IQCF2Q8IXL9 164 aa14.69□□□□□ -0.06
EXOSC3-201ENST00000327304 SUN5Q8TC36 379 aa14.69□□□□□ -0.06
EXOSC3-201ENST00000327304 G3V318 75 aa14.69□□□□□ -0.06
EXOSC3-201ENST00000327304 TMEM250H0YL14 139 aa14.69□□□□□ -0.06
EXOSC3-201ENST00000327304 GATA2P23769 480 aaPredicted RBP14.69□□□□□ -0.06
EXOSC3-201ENST00000327304 FAM90A2PQ658T7 463 aa14.69□□□□□ -0.06
EXOSC3-201ENST00000327304 TTC9CQ8N5M4 171 aa14.69□□□□□ -0.06
EXOSC3-201ENST00000327304 TXNDC17Q9BRA2 123 aa14.69□□□□□ -0.06
EXOSC3-201ENST00000327304 MRPL32Q9BYC8 188 aaKnown RBP14.69□□□□□ -0.06
EXOSC3-201ENST00000327304 PRSS22Q9GZN4 317 aa14.69□□□□□ -0.06
EXOSC3-201ENST00000327304 PSMB11A5LHX3 300 aa14.68□□□□□ -0.06
EXOSC3-201ENST00000327304 IGHV3-48P01763 117 aa14.68□□□□□ -0.06
EXOSC3-201ENST00000327304 UNQ5815/PRO19632Q6UWF5 114 aa14.68□□□□□ -0.06
EXOSC3-201ENST00000327304 OR1L4Q8NGR5 311 aa14.68□□□□□ -0.06
EXOSC3-201ENST00000327304 NOL4LQ96MY1 436 aaPredicted RBP14.68□□□□□ -0.06
EXOSC3-201ENST00000327304 JMJD8Q96S16 334 aa14.68□□□□□ -0.06
EXOSC3-201ENST00000327304 PFDN5Q99471 154 aa14.68□□□□□ -0.06
EXOSC3-201ENST00000327304 PAGE4O60829 102 aa14.67□□□□□ -0.06
EXOSC3-201ENST00000327304 IGF1P05019 195 aa14.67□□□□□ -0.06
EXOSC3-201ENST00000327304 CRIP2P52943 208 aaPredicted RBP14.67□□□□□ -0.06
EXOSC3-201ENST00000327304 CEBPGP53567 150 aa14.67□□□□□ -0.06
EXOSC3-201ENST00000327304 RHEBQ15382 184 aa14.67□□□□□ -0.06
EXOSC3-201ENST00000327304 SPATA31B1PQ5VZV4 182 aa14.67□□□□□ -0.06
EXOSC3-201ENST00000327304 OR4X1Q8NH49 305 aa14.67□□□□□ -0.06
EXOSC3-201ENST00000327304 NIPSNAP3BQ9BS92 247 aa14.67□□□□□ -0.06
EXOSC3-201ENST00000327304 DNAJC4Q9NNZ3 241 aa14.67□□□□□ -0.06
EXOSC3-201ENST00000327304 TECRQ9NZ01 308 aaKnown RBP14.67□□□□□ -0.06
EXOSC3-201ENST00000327304 FAM74A7A6NL05 159 aa14.66□□□□□ -0.06
EXOSC3-201ENST00000327304 TCF21O43680 179 aa14.66□□□□□ -0.06
EXOSC3-201ENST00000327304 GCHFRP30047 84 aa14.66□□□□□ -0.06
EXOSC3-201ENST00000327304 TAS2R45P59539 299 aa14.66□□□□□ -0.06
EXOSC3-201ENST00000327304 SRSF2Q01130 221 aaKnown RBP14.66□□□□□ -0.06
EXOSC3-201ENST00000327304 ZNF90Q03938 601 aa14.66□□□□□ -0.06
EXOSC3-201ENST00000327304 FAM74A3Q4VXF1 159 aa14.66□□□□□ -0.06
EXOSC3-201ENST00000327304 AWAT1Q58HT5 328 aa14.66□□□□□ -0.06
EXOSC3-201ENST00000327304 C19orf54Q5BKX5 351 aa14.66□□□□□ -0.06
EXOSC3-201ENST00000327304 OR5T1Q8NG75 326 aa14.66□□□□□ -0.06
EXOSC3-201ENST00000327304 TMEM37Q8WXS4 190 aa14.66□□□□□ -0.06
EXOSC3-201ENST00000327304 PUS1Q9Y606 427 aaKnown RBP eCLIP14.66□□□□□ -0.06
EXOSC3-201ENST00000327304 TRAV41A0A0B4J266 112 aa14.66□□□□□ -0.06
EXOSC3-201ENST00000327304 H3BQ15 152 aa14.66□□□□□ -0.06
EXOSC3-201ENST00000327304 AP4M1O00189 453 aa14.66□□□□□ -0.06
EXOSC3-201ENST00000327304 CLN5O75503 358 aa14.66□□□□□ -0.06
EXOSC3-201ENST00000327304 MIR17HGQ75NE6 70 aa14.66□□□□□ -0.06
EXOSC3-201ENST00000327304 SREK1IP1Q8N9Q2 155 aaPredicted RBP14.66□□□□□ -0.06
EXOSC3-201ENST00000327304 K7EIM0 57 aa14.65□□□□□ -0.06
EXOSC3-201ENST00000327304 M0R036 132 aa14.65□□□□□ -0.06
EXOSC3-201ENST00000327304 AKIRIN2Q53H80 203 aa14.65□□□□□ -0.06
EXOSC3-201ENST00000327304 PQLC2Q6ZP29 291 aa14.65□□□□□ -0.06
EXOSC3-201ENST00000327304 Q6ZSV7 163 aa14.65□□□□□ -0.06
EXOSC3-201ENST00000327304 Q8N2B8 174 aa14.65□□□□□ -0.06
EXOSC3-201ENST00000327304 ARL2-SNX15V9GYD0 113 aa14.65□□□□□ -0.06
EXOSC3-201ENST00000327304 IGLV11-55A0A075B6I3 123 aa14.64□□□□□ -0.07
EXOSC3-201ENST00000327304 ELOA3CA0A087WX78 387 aaPredicted RBP14.64□□□□□ -0.07
EXOSC3-201ENST00000327304 C7orf77A4D0Y5 90 aa14.64□□□□□ -0.07
EXOSC3-201ENST00000327304 C11orf94C9JXX5 98 aa14.64□□□□□ -0.07
EXOSC3-201ENST00000327304 PDE6DO43924 150 aa14.64□□□□□ -0.07
EXOSC3-201ENST00000327304 COX7A2P2O60397 106 aa14.64□□□□□ -0.07
EXOSC3-201ENST00000327304 C8orf88P0DMB2 117 aa14.64□□□□□ -0.07
EXOSC3-201ENST00000327304 OR4F5Q8NH21 305 aa14.64□□□□□ -0.07
EXOSC3-201ENST00000327304 FAM110DQ8TAY7 271 aaPredicted RBP14.64□□□□□ -0.07
EXOSC3-201ENST00000327304 TVP23CQ96ET8 276 aa14.64□□□□□ -0.07
EXOSC3-201ENST00000327304 OR4F4Q96R69 305 aa14.64□□□□□ -0.07
EXOSC3-201ENST00000327304 TMEM167BQ9NRX6 74 aa14.64□□□□□ -0.07
EXOSC3-201ENST00000327304 PLP1P60201 277 aa14.64□□□□□ -0.07
EXOSC3-201ENST00000327304 PNRC1Q12796 327 aaPredicted RBP14.64□□□□□ -0.07
EXOSC3-201ENST00000327304 RPS10P5Q9NQ39 176 aa14.64□□□□□ -0.07
EXOSC3-201ENST00000327304 THYN1Q9P016 225 aa14.64□□□□□ -0.07
EXOSC3-201ENST00000327304 JMJD1CQ15652 2540 aa14.63□□□□□ -0.07
EXOSC3-201ENST00000327304 IGHV3-21A0A0B4J1V1 117 aa14.63□□□□□ -0.07
EXOSC3-201ENST00000327304 IGLC1P0CG04 106 aa14.63□□□□□ -0.07
EXOSC3-201ENST00000327304 RPL15P61313 204 aaKnown RBP14.63□□□□□ -0.07
EXOSC3-201ENST00000327304 C10orf113Q5VZT2 155 aa14.63□□□□□ -0.07
EXOSC3-201ENST00000327304 TMEM68Q96MH6 324 aa14.63□□□□□ -0.07
EXOSC3-201ENST00000327304 FANCD2OSQ96PS1 177 aa14.63□□□□□ -0.07
EXOSC3-201ENST00000327304 F6UZH7 168 aa14.62□□□□□ -0.07
EXOSC3-201ENST00000327304 NUPL2O15504 423 aaKnown RBP14.62□□□□□ -0.07
EXOSC3-201ENST00000327304 CRYBA1P05813 215 aa14.62□□□□□ -0.07
EXOSC3-201ENST00000327304 KLK9Q2XQG4 91 aa14.62□□□□□ -0.07
EXOSC3-201ENST00000327304 TMEM88Q6PEY1 159 aa14.62□□□□□ -0.07
EXOSC3-201ENST00000327304 CBLN2Q8IUK8 224 aa14.62□□□□□ -0.07
EXOSC3-201ENST00000327304 SMCO4Q9NRQ5 59 aa14.62□□□□□ -0.07
EXOSC3-201ENST00000327304 ZNF580Q9UK33 172 aa14.62□□□□□ -0.07
EXOSC3-201ENST00000327304 KLK9Q9UKQ9 250 aa14.62□□□□□ -0.07
EXOSC3-201ENST00000327304 ZNF727A8MUV8 499 aa14.62□□□□□ -0.07
EXOSC3-201ENST00000327304 FABP1P07148 127 aa14.62□□□□□ -0.07
EXOSC3-201ENST00000327304 UBE2G2P60604 165 aa14.62□□□□□ -0.07
EXOSC3-201ENST00000327304 PATE2Q6UY27 113 aa14.62□□□□□ -0.07
EXOSC3-201ENST00000327304 C20orf24Q9BUV8 137 aa14.62□□□□□ -0.07
EXOSC3-201ENST00000327304 SERTAD4Q9NUC0 356 aa14.62□□□□□ -0.07
EXOSC3-201ENST00000327304 B4DEV8 164 aa14.61□□□□□ -0.07
EXOSC3-201ENST00000327304 HIST1H1BP16401 226 aaKnown RBP14.61□□□□□ -0.07
EXOSC3-201ENST00000327304 PPIFP30405 207 aaKnown RBP14.61□□□□□ -0.07
EXOSC3-201ENST00000327304 CFHR3Q02985 330 aa14.61□□□□□ -0.07
EXOSC3-201ENST00000327304 CST9LP1Q5W188 147 aa14.61□□□□□ -0.07
EXOSC3-201ENST00000327304 TUBA4BQ9H853 241 aa14.61□□□□□ -0.07
EXOSC3-201ENST00000327304 TMA7Q9Y2S6 64 aaKnown RBP14.61□□□□□ -0.07
EXOSC3-201ENST00000327304 TRAV30A0A087WSZ9 112 aa14.6□□□□□ -0.07
EXOSC3-201ENST00000327304 ATP5G3P48201 142 aa14.6□□□□□ -0.07
EXOSC3-201ENST00000327304 ZNF503Q96F45 646 aa14.6□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms