RNA–Protein interactions for RNA: ENST00000319980.10

IFT88-201, Transcript of intraflagellar transport 88, humanhuman

TSL 1 (best) BASIC

Gene IFT88, Length 3,091 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT88-201ENST00000319980 I3L2K1 104 aa6□□□□□ -1.45
IFT88-201ENST00000319980 OVOL3O00110 214 aa6□□□□□ -1.45
IFT88-201ENST00000319980 PPP1R2P9O14990 202 aa6□□□□□ -1.45
IFT88-201ENST00000319980 TGOLN2O43493 480 aa6□□□□□ -1.45
IFT88-201ENST00000319980 CX3CL1P78423 397 aa6□□□□□ -1.45
IFT88-201ENST00000319980 OR5I1Q13606 314 aa6□□□□□ -1.45
IFT88-201ENST00000319980 CENPWQ5EE01 88 aa6□□□□□ -1.45
IFT88-201ENST00000319980 LEMD1Q68G75 181 aa6□□□□□ -1.45
IFT88-201ENST00000319980 OR10G8Q8NGN5 311 aa6□□□□□ -1.45
IFT88-201ENST00000319980 C9JCJ5 164 aa6□□□□□ -1.45
IFT88-201ENST00000319980 GGCTO75223 188 aaKnown RBP6□□□□□ -1.45
IFT88-201ENST00000319980 HYPMO75409 117 aa6□□□□□ -1.45
IFT88-201ENST00000319980 IGHV4-39P01824 125 aa6□□□□□ -1.45
IFT88-201ENST00000319980 IGLC1P0CG04 106 aa6□□□□□ -1.45
IFT88-201ENST00000319980 PSG1P11464 419 aa6□□□□□ -1.45
IFT88-201ENST00000319980 HOXA5P20719 270 aa6□□□□□ -1.45
IFT88-201ENST00000319980 MEOX2P50222 304 aa6□□□□□ -1.45
IFT88-201ENST00000319980 ERVFC1-1P60608 527 aa6□□□□□ -1.45
IFT88-201ENST00000319980 RANP62826 216 aaKnown RBP6□□□□□ -1.45
IFT88-201ENST00000319980 PDZD11Q5EBL8 140 aa6□□□□□ -1.45
IFT88-201ENST00000319980 MINOS1Q5TGZ0 78 aa6□□□□□ -1.45
IFT88-201ENST00000319980 BLNKQ8WV28 456 aa6□□□□□ -1.45
IFT88-201ENST00000319980 PERPQ96FX8 193 aa6□□□□□ -1.45
IFT88-201ENST00000319980 LINC00479Q96M42 142 aa6□□□□□ -1.45
IFT88-201ENST00000319980 MINOS1-NBL1R4GNA1 71 aa6□□□□□ -1.45
IFT88-201ENST00000319980 S4R3C0 116 aa6□□□□□ -1.45
IFT88-201ENST00000319980 SLC17A3O00476 420 aa6□□□□□ -1.45
IFT88-201ENST00000319980 PHOX2AO14813 284 aa6□□□□□ -1.45
IFT88-201ENST00000319980 LYZP61626 148 aa6□□□□□ -1.45
IFT88-201ENST00000319980 GFI1BQ5VTD9 330 aa6□□□□□ -1.45
IFT88-201ENST00000319980 ZNF562Q6V9R5 426 aa6□□□□□ -1.45
IFT88-201ENST00000319980 FXYD5Q96DB9 178 aa6□□□□□ -1.45
IFT88-201ENST00000319980 TBX15Q96SF7 602 aa6□□□□□ -1.45
IFT88-201ENST00000319980 RASL11BQ9BPW5 248 aa6□□□□□ -1.45
IFT88-201ENST00000319980 SRSF8Q9BRL6 282 aaKnown RBP6□□□□□ -1.45
IFT88-201ENST00000319980 USP9XQ93008 2570 aaPredicted RBP5.99□□□□□ -1.45
IFT88-201ENST00000319980 MYO18BQ8IUG5 2567 aa5.99□□□□□ -1.45
IFT88-201ENST00000319980 MAP1AP78559 2803 aaPredicted RBP5.99□□□□□ -1.45
IFT88-201ENST00000319980 ZNF320A2RRD8 509 aa5.99□□□□□ -1.45
IFT88-201ENST00000319980 K7EIM0 57 aa5.99□□□□□ -1.45
IFT88-201ENST00000319980 S100A8P05109 93 aa5.99□□□□□ -1.45
IFT88-201ENST00000319980 TMEM11P17152 192 aa5.99□□□□□ -1.45
IFT88-201ENST00000319980 SRSF1Q07955 248 aaKnown RBP eCLIP5.99□□□□□ -1.45
IFT88-201ENST00000319980 TIGITQ495A1 244 aa5.99□□□□□ -1.45
IFT88-201ENST00000319980 OOSP1A8MZH6 123 aa5.99□□□□□ -1.45
IFT88-201ENST00000319980 IGKV1-17P01599 117 aa5.99□□□□□ -1.45
IFT88-201ENST00000319980 S100A9P06702 114 aaKnown RBP5.99□□□□□ -1.45
IFT88-201ENST00000319980 RD3LP0DJH9 198 aa5.99□□□□□ -1.45
IFT88-201ENST00000319980 SAA4P35542 130 aa5.99□□□□□ -1.45
IFT88-201ENST00000319980 CDX1P47902 265 aaPredicted RBP5.99□□□□□ -1.45
IFT88-201ENST00000319980 UBE2E1P51965 193 aa5.99□□□□□ -1.45
IFT88-201ENST00000319980 NDPQ00604 133 aa5.99□□□□□ -1.45
IFT88-201ENST00000319980 FOXL1Q12952 345 aa5.99□□□□□ -1.45
IFT88-201ENST00000319980 STXBP6Q8NFX7 210 aa5.99□□□□□ -1.45
IFT88-201ENST00000319980 ARPC1AQ92747 370 aa5.99□□□□□ -1.45
IFT88-201ENST00000319980 RBM14Q96PK6 669 aaKnown RBP5.99□□□□□ -1.45
IFT88-201ENST00000319980 DOPEY1Q5JWR5 2465 aa5.99□□□□□ -1.45
IFT88-201ENST00000319980 VPS13CQ709C8 3753 aa5.99□□□□□ -1.45
IFT88-201ENST00000319980 IFITM10A6NMD0 228 aa5.98□□□□□ -1.45
IFT88-201ENST00000319980 H3BTX0 84 aa5.98□□□□□ -1.45
IFT88-201ENST00000319980 NBEAP1P0C6P0 100 aa5.98□□□□□ -1.45
IFT88-201ENST00000319980 FAM120AOSQ5T036 256 aa5.98□□□□□ -1.45
IFT88-201ENST00000319980 NHLRC2Q8NBF2 726 aa5.98□□□□□ -1.45
IFT88-201ENST00000319980 LY96Q9Y6Y9 160 aa5.98□□□□□ -1.45
IFT88-201ENST00000319980 TRAV34A0A0B4J273 112 aa5.98□□□□□ -1.45
IFT88-201ENST00000319980 FAM106CPP0CH98 169 aa5.98□□□□□ -1.45
IFT88-201ENST00000319980 RNF224P0DH78 156 aa5.98□□□□□ -1.45
IFT88-201ENST00000319980 MGST1P10620 155 aaKnown RBP5.98□□□□□ -1.45
IFT88-201ENST00000319980 PDLIM4P50479 330 aa5.98□□□□□ -1.45
IFT88-201ENST00000319980 ASPHD1Q5U4P2 390 aa5.98□□□□□ -1.45
IFT88-201ENST00000319980 ZNF329Q86UD4 541 aa5.98□□□□□ -1.45
IFT88-201ENST00000319980 Q8N6K4 173 aa5.98□□□□□ -1.45
IFT88-201ENST00000319980 IMMP2LQ96T52 175 aa5.98□□□□□ -1.45
IFT88-201ENST00000319980 CCL19Q99731 98 aa5.98□□□□□ -1.45
IFT88-201ENST00000319980 TCEAL7Q9BRU2 100 aa5.98□□□□□ -1.45
IFT88-201ENST00000319980 GPR61Q9BZJ8 451 aa5.98□□□□□ -1.45
IFT88-201ENST00000319980 RNASE7Q9H1E1 156 aaKnown RBP5.98□□□□□ -1.45
IFT88-201ENST00000319980 HIGD1AQ9Y241 93 aa5.98□□□□□ -1.45
IFT88-201ENST00000319980 PGPA6NDG6 321 aa5.97□□□□□ -1.45
IFT88-201ENST00000319980 PLP1P60201 277 aa5.97□□□□□ -1.45
IFT88-201ENST00000319980 GNG5P63218 68 aa5.97□□□□□ -1.45
IFT88-201ENST00000319980 SRSF2Q01130 221 aaKnown RBP5.97□□□□□ -1.45
IFT88-201ENST00000319980 EBI3Q14213 229 aa5.97□□□□□ -1.45
IFT88-201ENST00000319980 OR1L6Q8NGR2 347 aa5.97□□□□□ -1.45
IFT88-201ENST00000319980 SGK494Q96LW2 274 aa5.97□□□□□ -1.45
IFT88-201ENST00000319980 GAR1Q9NY12 217 aaKnown RBP5.97□□□□□ -1.45
IFT88-201ENST00000319980 TBL2Q9Y4P3 447 aaKnown RBP5.97□□□□□ -1.45
IFT88-201ENST00000319980 TYMSP04818 313 aa5.97□□□□□ -1.45
IFT88-201ENST00000319980 FAM168AQ92567 244 aa5.97□□□□□ -1.45
IFT88-201ENST00000319980 FANCD2OSQ96PS1 177 aa5.97□□□□□ -1.45
IFT88-201ENST00000319980 SLC25A39Q9BZJ4 359 aaPredicted RBP5.97□□□□□ -1.45
IFT88-201ENST00000319980 IL36BQ9NZH7 164 aa5.97□□□□□ -1.45
IFT88-201ENST00000319980 CDC42EP3Q9UKI2 254 aa5.97□□□□□ -1.45
IFT88-201ENST00000319980 RPH3ALQ9UNE2 315 aa5.97□□□□□ -1.45
IFT88-201ENST00000319980 GCN1Q92616 2671 aaKnown RBP5.97□□□□□ -1.45
IFT88-201ENST00000319980 CELSR1Q9NYQ6 3014 aa5.97□□□□□ -1.45
IFT88-201ENST00000319980 CRYBG3Q68DQ2 2970 aa5.97□□□□□ -1.45
IFT88-201ENST00000319980 IGHV3OR16-10A0A075B7F0 116 aa5.97□□□□□ -1.45
IFT88-201ENST00000319980 PEX7O00628 323 aa5.97□□□□□ -1.45
IFT88-201ENST00000319980 ISLRO14498 428 aa5.97□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms