RNA–Protein interactions for RNA: ENST00000311034.6

NPAS4-201, Transcript of neuronal PAS domain protein 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NPAS4, Length 3,303 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS4-201ENST00000311034 SLC25A33Q9BSK2 321 aa11.03□□□□□ -0.64
NPAS4-201ENST00000311034 FOXA2Q9Y261 457 aaPredicted RBP11.03□□□□□ -0.64
NPAS4-201ENST00000311034 ABCA2Q9BZC7 2435 aa11.03□□□□□ -0.64
NPAS4-201ENST00000311034 TEX50A0A1B0GTY4 177 aa11.03□□□□□ -0.64
NPAS4-201ENST00000311034 OR4C46A6NHA9 309 aa11.03□□□□□ -0.64
NPAS4-201ENST00000311034 SP9P0CG40 484 aa11.03□□□□□ -0.64
NPAS4-201ENST00000311034 ACP1P24666 158 aa11.03□□□□□ -0.64
NPAS4-201ENST00000311034 FBLN7Q53RD9 439 aa11.03□□□□□ -0.64
NPAS4-201ENST00000311034 C10orf113Q5VZT2 155 aa11.03□□□□□ -0.64
NPAS4-201ENST00000311034 ZNF841Q6ZN19 808 aa11.03□□□□□ -0.64
NPAS4-201ENST00000311034 TNFRSF19Q9NS68 423 aa11.03□□□□□ -0.64
NPAS4-201ENST00000311034 SLC25A10Q9UBX3 287 aaPredicted RBP11.03□□□□□ -0.64
NPAS4-201ENST00000311034 COX11Q9Y6N1 276 aa11.03□□□□□ -0.64
NPAS4-201ENST00000311034 TRAV8-1A0A0A6YYK1 113 aa11.02□□□□□ -0.64
NPAS4-201ENST00000311034 SMIM27A0A1W2PRY6 76 aa11.02□□□□□ -0.64
NPAS4-201ENST00000311034 SAA1P0DJI8 122 aaPredicted RBP11.02□□□□□ -0.64
NPAS4-201ENST00000311034 C22orf34Q6ZV56 151 aa11.02□□□□□ -0.64
NPAS4-201ENST00000311034 MDS2Q8NDY4 140 aa11.02□□□□□ -0.64
NPAS4-201ENST00000311034 LOXL4Q96JB6 756 aa11.02□□□□□ -0.64
NPAS4-201ENST00000311034 ZPBPQ9BS86 351 aa11.02□□□□□ -0.64
NPAS4-201ENST00000311034 SSUH2Q9Y2M2 353 aa11.02□□□□□ -0.64
NPAS4-201ENST00000311034 FAM90A9PA6NNJ1 464 aa11.02□□□□□ -0.65
NPAS4-201ENST00000311034 ZNF891A8MT65 544 aaPredicted RBP11.02□□□□□ -0.65
NPAS4-201ENST00000311034 SRRM5B3KS81 715 aa11.02□□□□□ -0.65
NPAS4-201ENST00000311034 K7EM74 188 aa11.02□□□□□ -0.65
NPAS4-201ENST00000311034 PEX7O00628 323 aa11.02□□□□□ -0.65
NPAS4-201ENST00000311034 NUDT3O95989 172 aa11.02□□□□□ -0.65
NPAS4-201ENST00000311034 COX19Q49B96 90 aa11.02□□□□□ -0.65
NPAS4-201ENST00000311034 FAM90A1Q86YD7 464 aa11.02□□□□□ -0.65
NPAS4-201ENST00000311034 WFDC3Q8IUB2 231 aa11.02□□□□□ -0.65
NPAS4-201ENST00000311034 ZADH2Q8N4Q0 377 aa11.02□□□□□ -0.65
NPAS4-201ENST00000311034 DAZAP1Q96EP5 407 aaKnown RBP11.02□□□□□ -0.65
NPAS4-201ENST00000311034 TRAV17A0A0B4J275 112 aa11.02□□□□□ -0.65
NPAS4-201ENST00000311034 C21orf140B9A014 251 aa11.02□□□□□ -0.65
NPAS4-201ENST00000311034 M0R296 226 aa11.02□□□□□ -0.65
NPAS4-201ENST00000311034 IGHV3-23P01764 117 aa11.02□□□□□ -0.65
NPAS4-201ENST00000311034 TNFSF4P23510 183 aa11.02□□□□□ -0.65
NPAS4-201ENST00000311034 LYZP61626 148 aa11.02□□□□□ -0.65
NPAS4-201ENST00000311034 UBE2V1Q13404 147 aa11.02□□□□□ -0.65
NPAS4-201ENST00000311034 ZC2HC1AQ96GY0 325 aa11.02□□□□□ -0.65
NPAS4-201ENST00000311034 ERHP84090 104 aaKnown RBP11.01□□□□□ -0.65
NPAS4-201ENST00000311034 LOC389332A0A1B0GUA5 103 aa11.01□□□□□ -0.65
NPAS4-201ENST00000311034 PGPA6NDG6 321 aa11.01□□□□□ -0.65
NPAS4-201ENST00000311034 HSBP1L1C9JCN9 74 aa11.01□□□□□ -0.65
NPAS4-201ENST00000311034 C17orf58Q2M2W7 97 aa11.01□□□□□ -0.65
NPAS4-201ENST00000311034 SPATA12Q7Z6I5 190 aa11.01□□□□□ -0.65
NPAS4-201ENST00000311034 DEFB104AQ8WTQ1 72 aa11.01□□□□□ -0.65
NPAS4-201ENST00000311034 ORAOV1Q8WV07 137 aa11.01□□□□□ -0.65
NPAS4-201ENST00000311034 IGF2BP2-AS1Q96M15 143 aa11.01□□□□□ -0.65
NPAS4-201ENST00000311034 SLC25A2Q9BXI2 301 aa11.01□□□□□ -0.65
NPAS4-201ENST00000311034 A0A1W2PRE2 83 aa11.01□□□□□ -0.65
NPAS4-201ENST00000311034 J3KRW8 73 aa11.01□□□□□ -0.65
NPAS4-201ENST00000311034 UPK2O00526 184 aa11.01□□□□□ -0.65
NPAS4-201ENST00000311034 PRCDQ00LT1 54 aa11.01□□□□□ -0.65
NPAS4-201ENST00000311034 DDB2Q92466 427 aa11.01□□□□□ -0.65
NPAS4-201ENST00000311034 TMEM70Q9BUB7 260 aa11.01□□□□□ -0.65
NPAS4-201ENST00000311034 MRPL20Q9BYC9 149 aaKnown RBP11.01□□□□□ -0.65
NPAS4-201ENST00000311034 HILPDAQ9Y5L2 63 aa11.01□□□□□ -0.65
NPAS4-201ENST00000311034 KBTBD11-OT1A0A1B0GTJ5 212 aa11□□□□□ -0.65
NPAS4-201ENST00000311034 NKX6-3A6NJ46 265 aa11□□□□□ -0.65
NPAS4-201ENST00000311034 IGKV3-15P01624 115 aa11□□□□□ -0.65
NPAS4-201ENST00000311034 OR8B3Q8NGG8 313 aa11□□□□□ -0.65
NPAS4-201ENST00000311034 CHEK1O14757 476 aa11□□□□□ -0.65
NPAS4-201ENST00000311034 APOA2P02652 100 aa11□□□□□ -0.65
NPAS4-201ENST00000311034 FTH1P19P0C7X4 201 aa11□□□□□ -0.65
NPAS4-201ENST00000311034 MZT1Q08AG7 82 aa11□□□□□ -0.65
NPAS4-201ENST00000311034 CD69Q07108 199 aa10.99□□□□□ -0.65
NPAS4-201ENST00000311034 LINC00305Q7Z4B0 112 aa10.99□□□□□ -0.65
NPAS4-201ENST00000311034 PDPNQ86YL7 162 aa10.99□□□□□ -0.65
NPAS4-201ENST00000311034 OR1L4Q8NGR5 311 aa10.99□□□□□ -0.65
NPAS4-201ENST00000311034 GRAMD2BQ96HH9 432 aa10.99□□□□□ -0.65
NPAS4-201ENST00000311034 LEPROTL1O95214 131 aa10.99□□□□□ -0.65
NPAS4-201ENST00000311034 CT45A6P0DMU7 189 aa10.99□□□□□ -0.65
NPAS4-201ENST00000311034 CT45A5P0DMU8 189 aa10.99□□□□□ -0.65
NPAS4-201ENST00000311034 CT45A7P0DMV0 189 aa10.99□□□□□ -0.65
NPAS4-201ENST00000311034 RNASE2P10153 161 aaKnown RBP10.99□□□□□ -0.65
NPAS4-201ENST00000311034 HIST1H1EP10412 219 aaKnown RBP10.99□□□□□ -0.65
NPAS4-201ENST00000311034 COTL1Q14019 142 aa10.99□□□□□ -0.65
NPAS4-201ENST00000311034 KLF17Q5JT82 389 aaPredicted RBP10.99□□□□□ -0.65
NPAS4-201ENST00000311034 RNF7Q9UBF6 113 aa10.99□□□□□ -0.65
NPAS4-201ENST00000311034 DSCAMO60469 2012 aa10.99□□□□□ -0.65
NPAS4-201ENST00000311034 CGB1A6NKQ9 187 aa10.99□□□□□ -0.65
NPAS4-201ENST00000311034 E7EUB6 86 aa10.99□□□□□ -0.65
NPAS4-201ENST00000311034 F2RL2O00254 374 aa10.99□□□□□ -0.65
NPAS4-201ENST00000311034 TMEM177Q53S58 311 aa10.99□□□□□ -0.65
NPAS4-201ENST00000311034 LDLRAD2Q5SZI1 272 aa10.99□□□□□ -0.65
NPAS4-201ENST00000311034 IGHV2-26A0A0B4J1V2 119 aa10.98□□□□□ -0.65
NPAS4-201ENST00000311034 AARDQ4LEZ3 155 aa10.98□□□□□ -0.65
NPAS4-201ENST00000311034 IGKV3-7A0A075B6H7 116 aa10.98□□□□□ -0.65
NPAS4-201ENST00000311034 hADV38S2A0JD32 116 aa10.98□□□□□ -0.65
NPAS4-201ENST00000311034 OR2T8A6NH00 312 aa10.98□□□□□ -0.65
NPAS4-201ENST00000311034 BPIFB3P59826 476 aa10.98□□□□□ -0.65
NPAS4-201ENST00000311034 ZNF329Q86UD4 541 aa10.98□□□□□ -0.65
NPAS4-201ENST00000311034 P01737 135 aa10.97□□□□□ -0.65
NPAS4-201ENST00000311034 FAM222BQ8WU58 562 aa10.97□□□□□ -0.65
NPAS4-201ENST00000311034 NAA38Q9BRA0 125 aaKnown RBP10.97□□□□□ -0.65
NPAS4-201ENST00000311034 TPSG1Q9NRR2 321 aa10.97□□□□□ -0.65
NPAS4-201ENST00000311034 PTPRBP23467 1997 aa10.97□□□□□ -0.65
NPAS4-201ENST00000311034 IGHV3-49A0A0A0MS15 119 aa10.97□□□□□ -0.65
NPAS4-201ENST00000311034 FAM90A27PA6NNH2 459 aa10.97□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms