RNA–Protein interactions for RNA: ENST00000306024.3

LSM3-201, Transcript of LSM3 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM3, Length 3,815 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM3-201ENST00000306024 NOTCH2Q04721 2471 aa8.94□□□□□ -0.98
LSM3-201ENST00000306024 A1L4Q6 167 aa8.94□□□□□ -0.98
LSM3-201ENST00000306024 ZCCHC24Q8N2G6 241 aaKnown RBP8.94□□□□□ -0.98
LSM3-201ENST00000306024 FAM169BQ8N8A8 192 aa8.94□□□□□ -0.98
LSM3-201ENST00000306024 TMEM116Q8NCL8 245 aa8.94□□□□□ -0.98
LSM3-201ENST00000306024 OR4F17Q8NGA8 305 aa8.94□□□□□ -0.98
LSM3-201ENST00000306024 OR5A1Q8NGJ0 315 aa8.94□□□□□ -0.98
LSM3-201ENST00000306024 IGLV1-44P01699 117 aa8.93□□□□□ -0.98
LSM3-201ENST00000306024 IGLV3-1P01715 115 aa8.93□□□□□ -0.98
LSM3-201ENST00000306024 CSN1S1P47710 185 aa8.93□□□□□ -0.98
LSM3-201ENST00000306024 RAB9AP51151 201 aa8.93□□□□□ -0.98
LSM3-201ENST00000306024 Q6ZPA2 131 aa8.93□□□□□ -0.98
LSM3-201ENST00000306024 MIR17HGQ75NE6 70 aa8.93□□□□□ -0.98
LSM3-201ENST00000306024 FOXH1O75593 365 aa8.93□□□□□ -0.98
LSM3-201ENST00000306024 HSD52Q0P140 79 aa8.93□□□□□ -0.98
LSM3-201ENST00000306024 LHFPL4Q7Z7J7 247 aa8.93□□□□□ -0.98
LSM3-201ENST00000306024 SGK494Q96LW2 274 aa8.93□□□□□ -0.98
LSM3-201ENST00000306024 ZNF257Q9Y2Q1 563 aa8.93□□□□□ -0.98
LSM3-201ENST00000306024 A0A1W2PRE2 83 aa8.93□□□□□ -0.98
LSM3-201ENST00000306024 G3V4G9 280 aa8.93□□□□□ -0.98
LSM3-201ENST00000306024 H0YJW9 148 aa8.93□□□□□ -0.98
LSM3-201ENST00000306024 IGHV3-13P01766 116 aa8.93□□□□□ -0.98
LSM3-201ENST00000306024 IGHV3-7P01780 117 aa8.93□□□□□ -0.98
LSM3-201ENST00000306024 ADORA2A-AS1P86434 159 aa8.93□□□□□ -0.98
LSM3-201ENST00000306024 Q6ZS49 121 aa8.93□□□□□ -0.98
LSM3-201ENST00000306024 ZNF645Q8N7E2 425 aa8.93□□□□□ -0.98
LSM3-201ENST00000306024 GGTLC1Q9BX51 225 aa8.93□□□□□ -0.98
LSM3-201ENST00000306024 TMEM30CPA0ZSE6 113 aa8.92□□□□□ -0.98
LSM3-201ENST00000306024 HIGD1CA8MV81 97 aa8.92□□□□□ -0.98
LSM3-201ENST00000306024 APOBEC3AP31941 199 aaPredicted RBP8.92□□□□□ -0.98
LSM3-201ENST00000306024 KIR3DS1Q14943 382 aa8.92□□□□□ -0.98
LSM3-201ENST00000306024 EFNB3Q15768 340 aa8.92□□□□□ -0.98
LSM3-201ENST00000306024 ZBTB34Q8NCN2 500 aa8.92□□□□□ -0.98
LSM3-201ENST00000306024 VSTM2AQ8TAG5 236 aa8.92□□□□□ -0.98
LSM3-201ENST00000306024 C5orf30Q96GV9 206 aa8.92□□□□□ -0.98
LSM3-201ENST00000306024 PKIBQ9C010 78 aa8.92□□□□□ -0.98
LSM3-201ENST00000306024 COMMD5Q9GZQ3 224 aa8.92□□□□□ -0.98
LSM3-201ENST00000306024 RNF7Q9UBF6 113 aa8.92□□□□□ -0.98
LSM3-201ENST00000306024 ASPHD1Q5U4P2 390 aa8.92□□□□□ -0.98
LSM3-201ENST00000306024 TMEM42Q69YG0 159 aa8.92□□□□□ -0.98
LSM3-201ENST00000306024 TREML4Q6UXN2 200 aa8.92□□□□□ -0.98
LSM3-201ENST00000306024 H1FXQ92522 213 aaKnown RBP8.92□□□□□ -0.98
LSM3-201ENST00000306024 NEUROG1Q92886 237 aa8.92□□□□□ -0.98
LSM3-201ENST00000306024 IGHV3OR15-7A0A075B7D8 119 aa8.92□□□□□ -0.98
LSM3-201ENST00000306024 PGLYRP4Q96LB8 373 aa8.92□□□□□ -0.98
LSM3-201ENST00000306024 RAB1BQ9H0U4 201 aa8.92□□□□□ -0.98
LSM3-201ENST00000306024 TSSC4Q9Y5U2 329 aaPredicted RBP8.92□□□□□ -0.98
LSM3-201ENST00000306024 LY96Q9Y6Y9 160 aa8.92□□□□□ -0.98
LSM3-201ENST00000306024 BOD1L1Q8NFC6 3051 aa8.91□□□□□ -0.98
LSM3-201ENST00000306024 SPINT2O43291 252 aa8.91□□□□□ -0.98
LSM3-201ENST00000306024 OR4A5Q8NH83 315 aa8.91□□□□□ -0.98
LSM3-201ENST00000306024 MS4A6AQ9H2W1 248 aa8.91□□□□□ -0.98
LSM3-201ENST00000306024 PTPN13Q12923 2485 aa8.91□□□□□ -0.98
LSM3-201ENST00000306024 TRAV24A0A0B4J272 114 aa8.91□□□□□ -0.98
LSM3-201ENST00000306024 SRSF7Q16629 238 aaKnown RBP eCLIP8.91□□□□□ -0.98
LSM3-201ENST00000306024 WFDC12Q8WWY7 111 aa8.91□□□□□ -0.98
LSM3-201ENST00000306024 TIMD4Q96H15 378 aa8.91□□□□□ -0.98
LSM3-201ENST00000306024 S1PR3Q99500 378 aa8.91□□□□□ -0.98
LSM3-201ENST00000306024 PPIAL4EA0A075B759 164 aa8.91□□□□□ -0.98
LSM3-201ENST00000306024 C9orf118A6NHY6 69 aa8.91□□□□□ -0.98
LSM3-201ENST00000306024 K7EP34 96 aa8.91□□□□□ -0.98
LSM3-201ENST00000306024 WNT9BO14905 357 aa8.91□□□□□ -0.98
LSM3-201ENST00000306024 PPIAL4FP0DN26 164 aa8.91□□□□□ -0.98
LSM3-201ENST00000306024 VKORC1L1Q8N0U8 176 aa8.91□□□□□ -0.98
LSM3-201ENST00000306024 KIR3DL3Q8N743 410 aa8.91□□□□□ -0.98
LSM3-201ENST00000306024 MGST2Q99735 147 aa8.91□□□□□ -0.98
LSM3-201ENST00000306024 NABP2Q9BQ15 211 aa8.91□□□□□ -0.98
LSM3-201ENST00000306024 B9A039 149 aa8.9□□□□□ -0.98
LSM3-201ENST00000306024 OR2H2O95918 312 aa8.9□□□□□ -0.98
LSM3-201ENST00000306024 SLC25A5P05141 298 aaKnown RBP8.9□□□□□ -0.98
LSM3-201ENST00000306024 RPL30P62888 115 aaKnown RBP8.9□□□□□ -0.98
LSM3-201ENST00000306024 HBBP68871 147 aa8.9□□□□□ -0.98
LSM3-201ENST00000306024 MEF2CQ06413 473 aaPredicted RBP8.9□□□□□ -0.98
LSM3-201ENST00000306024 MBNL2Q5VZF2 373 aaKnown RBP8.9□□□□□ -0.98
LSM3-201ENST00000306024 LINC00596Q86U02 117 aa8.9□□□□□ -0.98
LSM3-201ENST00000306024 LOC400499M0QZD8 3231 aa8.9□□□□□ -0.98
LSM3-201ENST00000306024 SERTM2A0A1B0GWG4 89 aa8.9□□□□□ -0.98
LSM3-201ENST00000306024 C15orf62A8K5M9 175 aa8.9□□□□□ -0.98
LSM3-201ENST00000306024 COX7A2P2O60397 106 aa8.9□□□□□ -0.98
LSM3-201ENST00000306024 P01737 135 aa8.9□□□□□ -0.98
LSM3-201ENST00000306024 CEBPDP49716 269 aaPredicted RBP8.9□□□□□ -0.98
LSM3-201ENST00000306024 AMMECR1Q9Y4X0 333 aaPredicted RBP8.9□□□□□ -0.98
LSM3-201ENST00000306024 TMEM238LA0A1B0GVL6 79 aa8.9□□□□□ -0.99
LSM3-201ENST00000306024 PLAUP00749 431 aa8.9□□□□□ -0.99
LSM3-201ENST00000306024 SMIM13P0DJ93 91 aa8.9□□□□□ -0.99
LSM3-201ENST00000306024 IGFBP2P18065 325 aa8.9□□□□□ -0.99
LSM3-201ENST00000306024 ZNF138P52744 262 aa8.9□□□□□ -0.99
LSM3-201ENST00000306024 KRTAP27-1Q3LI81 207 aa8.9□□□□□ -0.99
LSM3-201ENST00000306024 TCF24Q7RTU0 167 aa8.9□□□□□ -0.99
LSM3-201ENST00000306024 TPRX1Q8N7U7 411 aa8.9□□□□□ -0.99
LSM3-201ENST00000306024 BLNKQ8WV28 456 aa8.9□□□□□ -0.99
LSM3-201ENST00000306024 GRAMD2BQ96HH9 432 aa8.9□□□□□ -0.99
LSM3-201ENST00000306024 C22orf34Q6ZV56 151 aa8.89□□□□□ -0.99
LSM3-201ENST00000306024 NUP35Q8NFH5 326 aa8.89□□□□□ -0.99
LSM3-201ENST00000306024 TEX48A0A1B0GUV7 120 aa8.89□□□□□ -0.99
LSM3-201ENST00000306024 C17orf100A8MU93 164 aa8.89□□□□□ -0.99
LSM3-201ENST00000306024 A8MWL6 223 aa8.89□□□□□ -0.99
LSM3-201ENST00000306024 J3QR06 171 aa8.89□□□□□ -0.99
LSM3-201ENST00000306024 THBDP07204 575 aa8.89□□□□□ -0.99
LSM3-201ENST00000306024 ADIPOQQ15848 244 aa8.89□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms