RNA–Protein interactions for RNA: ENST00000303538.12

PDS5A-201, Transcript of PDS5 cohesin associated factor A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDS5A, Length 7,176 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDS5A-201ENST00000303538 UCP1P25874 307 aa13.85□□□□□ -0.19
PDS5A-201ENST00000303538 SRSF4Q08170 494 aaKnown RBP13.85□□□□□ -0.19
PDS5A-201ENST00000303538 LY75O60449 1722 aa13.85□□□□□ -0.19
PDS5A-201ENST00000303538 COL5A3P25940 1745 aaPredicted RBP13.85□□□□□ -0.19
PDS5A-201ENST00000303538 OVOL1O14753 267 aa13.84□□□□□ -0.19
PDS5A-201ENST00000303538 STAG3L3P0CL85 134 aa13.84□□□□□ -0.19
PDS5A-201ENST00000303538 LAMTOR3Q9UHA4 124 aa13.84□□□□□ -0.19
PDS5A-201ENST00000303538 ROS1P08922 2347 aa13.84□□□□□ -0.19
PDS5A-201ENST00000303538 LOC102723996A0A087X1L8 192 aa13.84□□□□□ -0.19
PDS5A-201ENST00000303538 RUSC1-AS1Q66K80 236 aa13.84□□□□□ -0.19
PDS5A-201ENST00000303538 TRAV5A0A0B4J249 113 aa13.84□□□□□ -0.19
PDS5A-201ENST00000303538 IZUMO1RA6ND01 250 aa13.84□□□□□ -0.19
PDS5A-201ENST00000303538 PMS2P5A8MQ11 134 aa13.84□□□□□ -0.19
PDS5A-201ENST00000303538 CA1P00915 261 aaPredicted RBP13.84□□□□□ -0.19
PDS5A-201ENST00000303538 CCL1P22362 96 aa13.84□□□□□ -0.19
PDS5A-201ENST00000303538 Q6AWC8 147 aa13.84□□□□□ -0.19
PDS5A-201ENST00000303538 RBBP6Q7Z6E9 1792 aaKnown RBP13.84□□□□□ -0.19
PDS5A-201ENST00000303538 RPL36AP83881 106 aaKnown RBP13.84□□□□□ -0.19
PDS5A-201ENST00000303538 RPL36ALQ969Q0 106 aaKnown RBP13.84□□□□□ -0.19
PDS5A-201ENST00000303538 RTBDNQ9BSG5 229 aaPredicted RBP13.83□□□□□ -0.19
PDS5A-201ENST00000303538 RIF1Q5UIP0 2472 aaKnown RBP13.83□□□□□ -0.2
PDS5A-201ENST00000303538 CEACAM8P31997 349 aaPredicted RBP13.83□□□□□ -0.2
PDS5A-201ENST00000303538 IGFL4Q6B9Z1 124 aa13.83□□□□□ -0.2
PDS5A-201ENST00000303538 PEF1Q9UBV8 284 aaKnown RBP13.83□□□□□ -0.2
PDS5A-201ENST00000303538 FREM3P0C091 2139 aa13.83□□□□□ -0.2
PDS5A-201ENST00000303538 IGLV3-19P01714 112 aa13.83□□□□□ -0.2
PDS5A-201ENST00000303538 MBNL3Q9NUK0 354 aaKnown RBP13.83□□□□□ -0.2
PDS5A-201ENST00000303538 C1orf159Q96HA4 380 aa13.83□□□□□ -0.2
PDS5A-201ENST00000303538 F8WEM9 126 aa13.83□□□□□ -0.2
PDS5A-201ENST00000303538 SLC25A2Q9BXI2 301 aa13.83□□□□□ -0.2
PDS5A-201ENST00000303538 F5H768 121 aa13.83□□□□□ -0.2
PDS5A-201ENST00000303538 PLNP26678 52 aa13.83□□□□□ -0.2
PDS5A-201ENST00000303538 TIMP3P35625 211 aa13.83□□□□□ -0.2
PDS5A-201ENST00000303538 C6orf226Q5I0X4 101 aa13.83□□□□□ -0.2
PDS5A-201ENST00000303538 EXOC3-AS1Q8N2X6 119 aa13.82□□□□□ -0.2
PDS5A-201ENST00000303538 NHP2Q9NX24 153 aaKnown RBP13.82□□□□□ -0.2
PDS5A-201ENST00000303538 LYZL4Q96KX0 146 aa13.82□□□□□ -0.2
PDS5A-201ENST00000303538 SYNJ2BPP57105 145 aa13.82□□□□□ -0.2
PDS5A-201ENST00000303538 TPTE2P1Q5T6R2 138 aa13.82□□□□□ -0.2
PDS5A-201ENST00000303538 LHBP01229 141 aa13.82□□□□□ -0.2
PDS5A-201ENST00000303538 DDTP30046 118 aa13.82□□□□□ -0.2
PDS5A-201ENST00000303538 IGHV1-3A0A0C4DH29 117 aa13.81□□□□□ -0.2
PDS5A-201ENST00000303538 IGHV1-8P0DP01 117 aa13.81□□□□□ -0.2
PDS5A-201ENST00000303538 RPL32P62910 135 aaKnown RBP13.81□□□□□ -0.2
PDS5A-201ENST00000303538 TMEM178BH3BS89 294 aa13.81□□□□□ -0.2
PDS5A-201ENST00000303538 RNF166Q96A37 237 aaPredicted RBP13.81□□□□□ -0.2
PDS5A-201ENST00000303538 PTPRFP10586 1907 aa13.81□□□□□ -0.2
PDS5A-201ENST00000303538 USF3Q68DE3 2245 aa13.81□□□□□ -0.2
PDS5A-201ENST00000303538 ZNF98A6NK75 572 aa13.81□□□□□ -0.2
PDS5A-201ENST00000303538 NAPSAO96009 420 aa13.81□□□□□ -0.2
PDS5A-201ENST00000303538 TRBV6-7A0A0A0MS04 114 aa13.81□□□□□ -0.2
PDS5A-201ENST00000303538 COL8A2P25067 703 aa13.81□□□□□ -0.2
PDS5A-201ENST00000303538 SCRT1Q9BWW7 348 aa13.81□□□□□ -0.2
PDS5A-201ENST00000303538 CD200R1LQ6Q8B3 271 aa13.8□□□□□ -0.2
PDS5A-201ENST00000303538 PARP14Q460N5 1801 aa13.8□□□□□ -0.2
PDS5A-201ENST00000303538 MBD3L1Q8WWY6 194 aa13.8□□□□□ -0.2
PDS5A-201ENST00000303538 ZNF625Q96I27 306 aaPredicted RBP13.8□□□□□ -0.2
PDS5A-201ENST00000303538 SPCS1Q9Y6A9 102 aa13.8□□□□□ -0.2
PDS5A-201ENST00000303538 TOMM40O96008 361 aa13.8□□□□□ -0.2
PDS5A-201ENST00000303538 LOC285556D6RIA3 1793 aa13.8□□□□□ -0.2
PDS5A-201ENST00000303538 TRAV13-1A0A0B4J241 112 aa13.8□□□□□ -0.2
PDS5A-201ENST00000303538 ADAMTS7Q9UKP4 1686 aa13.8□□□□□ -0.2
PDS5A-201ENST00000303538 A0A1B0GW15 77 aa13.8□□□□□ -0.2
PDS5A-201ENST00000303538 PGPEP1LA6NFU8 196 aa13.8□□□□□ -0.2
PDS5A-201ENST00000303538 PSME4Q14997 1843 aa13.8□□□□□ -0.2
PDS5A-201ENST00000303538 DPM2O94777 84 aa13.79□□□□□ -0.2
PDS5A-201ENST00000303538 FOXL1Q12952 345 aa13.79□□□□□ -0.2
PDS5A-201ENST00000303538 NCR2O95944 276 aa13.79□□□□□ -0.2
PDS5A-201ENST00000303538 XIRP1Q702N8 1843 aaKnown RBP13.79□□□□□ -0.2
PDS5A-201ENST00000303538 DUTP33316 252 aaKnown RBP13.79□□□□□ -0.2
PDS5A-201ENST00000303538 PAQR4Q8N4S7 273 aaPredicted RBP13.79□□□□□ -0.2
PDS5A-201ENST00000303538 COL4A1P02462 1669 aa13.79□□□□□ -0.2
PDS5A-201ENST00000303538 PSPNO60542 156 aa13.79□□□□□ -0.2
PDS5A-201ENST00000303538 A0A1B0GTI1 187 aa13.79□□□□□ -0.2
PDS5A-201ENST00000303538 CLPSP04118 112 aa13.78□□□□□ -0.2
PDS5A-201ENST00000303538 PRCDQ00LT1 54 aa13.78□□□□□ -0.2
PDS5A-201ENST00000303538 MORN3Q6PF18 240 aaPredicted RBP13.78□□□□□ -0.2
PDS5A-201ENST00000303538 EDA2RQ9HAV5 297 aa13.78□□□□□ -0.2
PDS5A-201ENST00000303538 LRRK1Q38SD2 2015 aa13.78□□□□□ -0.2
PDS5A-201ENST00000303538 DOCK9Q9BZ29 2069 aa13.78□□□□□ -0.2
PDS5A-201ENST00000303538 M0R2P5 195 aa13.78□□□□□ -0.2
PDS5A-201ENST00000303538 PSG1P11464 419 aa13.78□□□□□ -0.2
PDS5A-201ENST00000303538 NBASA2RRP1 2371 aa13.78□□□□□ -0.2
PDS5A-201ENST00000303538 NTN3O00634 580 aaPredicted RBP13.78□□□□□ -0.2
PDS5A-201ENST00000303538 ERCC8Q13216 396 aa13.78□□□□□ -0.2
PDS5A-201ENST00000303538 LSM4Q9Y4Z0 139 aaKnown RBP13.78□□□□□ -0.2
PDS5A-201ENST00000303538 PHF3Q92576 2039 aaKnown RBP13.78□□□□□ -0.2
PDS5A-201ENST00000303538 ORMDL2Q53FV1 153 aa13.78□□□□□ -0.2
PDS5A-201ENST00000303538 PLSCR4Q9NRQ2 329 aa13.78□□□□□ -0.2
PDS5A-201ENST00000303538 IGLV3-12A0A075B6K2 115 aa13.77□□□□□ -0.2
PDS5A-201ENST00000303538 C1QTNF4Q9BXJ3 329 aa13.77□□□□□ -0.2
PDS5A-201ENST00000303538 SCN10AQ9Y5Y9 1956 aa13.77□□□□□ -0.2
PDS5A-201ENST00000303538 HIST1H4AP62805 103 aaKnown RBP13.77□□□□□ -0.21
PDS5A-201ENST00000303538 A0A1B0GV90 55 aa13.77□□□□□ -0.21
PDS5A-201ENST00000303538 H3BUT2 72 aa13.77□□□□□ -0.21
PDS5A-201ENST00000303538 SAA4P35542 130 aa13.77□□□□□ -0.21
PDS5A-201ENST00000303538 DTX1Q86Y01 620 aa13.77□□□□□ -0.21
PDS5A-201ENST00000303538 Q8TAT8 98 aa13.77□□□□□ -0.21
PDS5A-201ENST00000303538 XCL2Q9UBD3 114 aa13.77□□□□□ -0.21
PDS5A-201ENST00000303538 MBD3L4A6NDZ8 208 aaPredicted RBP13.76□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 87.1 ms