RNA–Protein interactions for RNA: ENST00000296215.7

SNIP1-201, Transcript of Smad nuclear interacting protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNIP1, Length 4,605 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNIP1-201ENST00000296215 J3QLI3 93 aa9.66□□□□□ -0.86
SNIP1-201ENST00000296215 ZFAND5O76080 213 aa9.66□□□□□ -0.86
SNIP1-201ENST00000296215 MGPP08493 103 aa9.66□□□□□ -0.86
SNIP1-201ENST00000296215 C3orf36Q3SXR2 165 aa9.66□□□□□ -0.86
SNIP1-201ENST00000296215 C8orf31Q8N9H6 132 aa9.66□□□□□ -0.86
SNIP1-201ENST00000296215 KIAA1217Q5T5P2 1943 aa9.66□□□□□ -0.86
SNIP1-201ENST00000296215 DYSFO75923 2080 aa9.66□□□□□ -0.86
SNIP1-201ENST00000296215 PAPPA-AS1Q5QFB9 102 aa9.66□□□□□ -0.86
SNIP1-201ENST00000296215 CHCHD2Q9Y6H1 151 aaPredicted RBP9.66□□□□□ -0.86
SNIP1-201ENST00000296215 FGF12P61328 243 aa9.65□□□□□ -0.86
SNIP1-201ENST00000296215 TM2D2Q9BX73 214 aa9.65□□□□□ -0.86
SNIP1-201ENST00000296215 PLCE1Q9P212 2302 aa9.65□□□□□ -0.86
SNIP1-201ENST00000296215 IGHV3-13P01766 116 aa9.65□□□□□ -0.86
SNIP1-201ENST00000296215 COX6A1P12074 109 aa9.65□□□□□ -0.86
SNIP1-201ENST00000296215 MPV17P39210 176 aa9.65□□□□□ -0.86
SNIP1-201ENST00000296215 DKK2Q9UBU2 259 aa9.65□□□□□ -0.86
SNIP1-201ENST00000296215 CACNA1IQ9P0X4 2223 aa9.65□□□□□ -0.86
SNIP1-201ENST00000296215 IGKV1D-16P01601 117 aa9.65□□□□□ -0.86
SNIP1-201ENST00000296215 IGHV3-9P01782 118 aa9.65□□□□□ -0.86
SNIP1-201ENST00000296215 PYYP10082 97 aa9.65□□□□□ -0.86
SNIP1-201ENST00000296215 NPPCP23582 126 aa9.65□□□□□ -0.86
SNIP1-201ENST00000296215 FKBP2P26885 142 aaKnown RBP9.65□□□□□ -0.86
SNIP1-201ENST00000296215 HLA-DMBP28068 263 aa9.65□□□□□ -0.86
SNIP1-201ENST00000296215 MAGEA5P43359 124 aa9.65□□□□□ -0.86
SNIP1-201ENST00000296215 HAX1O00165 279 aa9.65□□□□□ -0.87
SNIP1-201ENST00000296215 PEBP1P30086 187 aaKnown RBP9.65□□□□□ -0.87
SNIP1-201ENST00000296215 RBMY1BA6NDE4 496 aaKnown RBP9.64□□□□□ -0.87
SNIP1-201ENST00000296215 RBMY1EA6NEQ0 496 aaKnown RBP9.64□□□□□ -0.87
SNIP1-201ENST00000296215 F8WDY8 70 aa9.64□□□□□ -0.87
SNIP1-201ENST00000296215 AGFG2O95081 481 aa9.64□□□□□ -0.87
SNIP1-201ENST00000296215 RBMY1DP0C7P1 496 aaKnown RBP9.64□□□□□ -0.87
SNIP1-201ENST00000296215 RBMY1A1P0DJD3 496 aaKnown RBP9.64□□□□□ -0.87
SNIP1-201ENST00000296215 RBMY1CP0DJD4 496 aa9.64□□□□□ -0.87
SNIP1-201ENST00000296215 ZNF32P17041 273 aa9.64□□□□□ -0.87
SNIP1-201ENST00000296215 C1orf61Q13536 156 aa9.64□□□□□ -0.87
SNIP1-201ENST00000296215 CIRBPQ14011 172 aaKnown RBP9.64□□□□□ -0.87
SNIP1-201ENST00000296215 RBMY1FQ15415 496 aaKnown RBP9.64□□□□□ -0.87
SNIP1-201ENST00000296215 TREML4Q6UXN2 200 aa9.64□□□□□ -0.87
SNIP1-201ENST00000296215 TRAV41A0A0B4J266 112 aa9.64□□□□□ -0.87
SNIP1-201ENST00000296215 ACYP1P07311 99 aa9.64□□□□□ -0.87
SNIP1-201ENST00000296215 hADV29S1A0JD25 119 aa9.64□□□□□ -0.87
SNIP1-201ENST00000296215 HLA-DRB4P13762 266 aa9.64□□□□□ -0.87
SNIP1-201ENST00000296215 PCSK4Q6UW60 755 aa9.64□□□□□ -0.87
SNIP1-201ENST00000296215 VN1R4Q7Z5H5 301 aa9.64□□□□□ -0.87
SNIP1-201ENST00000296215 WIPF2Q8TF74 440 aaPredicted RBP9.64□□□□□ -0.87
SNIP1-201ENST00000296215 PRO0628Q9UI54 55 aa9.64□□□□□ -0.87
SNIP1-201ENST00000296215 HLA-DRB4X5D2U9 266 aa9.64□□□□□ -0.87
SNIP1-201ENST00000296215 SEC16AO15027 2179 aa9.64□□□□□ -0.87
SNIP1-201ENST00000296215 RGPD5Q99666 1765 aa9.64□□□□□ -0.87
SNIP1-201ENST00000296215 TMEM213A2RRL7 107 aa9.63□□□□□ -0.87
SNIP1-201ENST00000296215 LIPT2A6NK58 231 aa9.63□□□□□ -0.87
SNIP1-201ENST00000296215 UTF1Q5T230 341 aa9.63□□□□□ -0.87
SNIP1-201ENST00000296215 RS1O15537 224 aa9.63□□□□□ -0.87
SNIP1-201ENST00000296215 THBDP07204 575 aa9.63□□□□□ -0.87
SNIP1-201ENST00000296215 SPINK2P20155 84 aa9.63□□□□□ -0.87
SNIP1-201ENST00000296215 DTX2Q86UW9 622 aa9.63□□□□□ -0.87
SNIP1-201ENST00000296215 PEMTQ9UBM1 199 aa9.63□□□□□ -0.87
SNIP1-201ENST00000296215 SIGLEC9Q9Y336 463 aa9.63□□□□□ -0.87
SNIP1-201ENST00000296215 UPK2O00526 184 aa9.63□□□□□ -0.87
SNIP1-201ENST00000296215 LYPD3O95274 346 aa9.63□□□□□ -0.87
SNIP1-201ENST00000296215 NCR2O95944 276 aa9.63□□□□□ -0.87
SNIP1-201ENST00000296215 SHISA5Q8N114 240 aa9.63□□□□□ -0.87
SNIP1-201ENST00000296215 ZNF576Q9H609 170 aa9.63□□□□□ -0.87
SNIP1-201ENST00000296215 IGKV1-9A0A0C4DH69 117 aa9.63□□□□□ -0.87
SNIP1-201ENST00000296215 A0A0G2JRQ6 117 aa9.63□□□□□ -0.87
SNIP1-201ENST00000296215 PATE4P0C8F1 98 aa9.63□□□□□ -0.87
SNIP1-201ENST00000296215 TMEM196Q5HYL7 178 aa9.63□□□□□ -0.87
SNIP1-201ENST00000296215 SMRP1Q8NCR6 262 aa9.63□□□□□ -0.87
SNIP1-201ENST00000296215 THSD7AQ9UPZ6 1657 aa9.63□□□□□ -0.87
SNIP1-201ENST00000296215 IGHV3-15A0A0B4J1V0 119 aa9.62□□□□□ -0.87
SNIP1-201ENST00000296215 TRAV21A0A0B4J279 112 aa9.62□□□□□ -0.87
SNIP1-201ENST00000296215 Q8N976 141 aa9.62□□□□□ -0.87
SNIP1-201ENST00000296215 TTTY13Q9BZ97 58 aa9.62□□□□□ -0.87
SNIP1-201ENST00000296215 ANAPC10Q9UM13 185 aa9.62□□□□□ -0.87
SNIP1-201ENST00000296215 ESPL1Q14674 2120 aa9.62□□□□□ -0.87
SNIP1-201ENST00000296215 PRR30Q53SZ7 412 aaPredicted RBP9.62□□□□□ -0.87
SNIP1-201ENST00000296215 MORN5Q5VZ52 161 aa9.62□□□□□ -0.87
SNIP1-201ENST00000296215 LINC00596Q86U02 117 aa9.62□□□□□ -0.87
SNIP1-201ENST00000296215 C10orf105Q8TEF2 133 aa9.62□□□□□ -0.87
SNIP1-201ENST00000296215 Q6ZRM9 215 aa9.62□□□□□ -0.87
SNIP1-201ENST00000296215 LINC00305Q7Z4B0 112 aa9.62□□□□□ -0.87
SNIP1-201ENST00000296215 LINC01465Q8N7H1 131 aa9.62□□□□□ -0.87
SNIP1-201ENST00000296215 SVILO95425 2214 aa9.61□□□□□ -0.87
SNIP1-201ENST00000296215 ZNF785A8K8V0 405 aa9.61□□□□□ -0.87
SNIP1-201ENST00000296215 H0YIG0 161 aa9.61□□□□□ -0.87
SNIP1-201ENST00000296215 PLXDC1Q8IUK5 500 aa9.61□□□□□ -0.87
SNIP1-201ENST00000296215 CARD19Q96LW7 228 aa9.61□□□□□ -0.87
SNIP1-201ENST00000296215 PDCD11Q14690 1871 aaKnown RBP9.61□□□□□ -0.87
SNIP1-201ENST00000296215 PRSS38A1L453 326 aa9.61□□□□□ -0.87
SNIP1-201ENST00000296215 LTAP01374 205 aa9.61□□□□□ -0.87
SNIP1-201ENST00000296215 INAFM2P0DMQ5 153 aa9.61□□□□□ -0.87
SNIP1-201ENST00000296215 VMA21Q3ZAQ7 101 aa9.61□□□□□ -0.87
SNIP1-201ENST00000296215 TMEM158Q8WZ71 300 aa9.61□□□□□ -0.87
SNIP1-201ENST00000296215 RNASE1P07998 156 aaKnown RBP9.61□□□□□ -0.87
SNIP1-201ENST00000296215 PEAR1Q5VY43 1037 aaPredicted RBP9.61□□□□□ -0.87
SNIP1-201ENST00000296215 FOXB1Q99853 325 aa9.61□□□□□ -0.87
SNIP1-201ENST00000296215 SIRPDQ9H106 197 aa9.61□□□□□ -0.87
SNIP1-201ENST00000296215 PFN2P35080 140 aa9.6□□□□□ -0.87
SNIP1-201ENST00000296215 Q6Q795 121 aa9.6□□□□□ -0.87
SNIP1-201ENST00000296215 LINC00477Q96M19 166 aa9.6□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 97.9 ms