RNA–Protein interactions for RNA: ENST00000277817.10

HERC4-201, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 1 (best) BASIC

Gene HERC4, Length 4,371 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-201ENST00000277817 ORM1P02763 201 aa2.34□□□□□ -2.03
HERC4-201ENST00000277817 CRYGSP22914 178 aa2.34□□□□□ -2.03
HERC4-201ENST00000277817 RND2P52198 227 aa2.34□□□□□ -2.03
HERC4-201ENST00000277817 QRFPP83859 136 aa2.34□□□□□ -2.03
HERC4-201ENST00000277817 TFF3Q07654 80 aa2.34□□□□□ -2.03
HERC4-201ENST00000277817 ZNF506Q5JVG8 444 aa2.34□□□□□ -2.03
HERC4-201ENST00000277817 PRNTQ86SH4 94 aa2.34□□□□□ -2.03
HERC4-201ENST00000277817 GGNQ86UU5 652 aa2.34□□□□□ -2.03
HERC4-201ENST00000277817 LHFPL1Q86WI0 220 aa2.34□□□□□ -2.03
HERC4-201ENST00000277817 WDFY1Q8IWB7 410 aa2.34□□□□□ -2.03
HERC4-201ENST00000277817 Q8WTZ3 238 aa2.34□□□□□ -2.03
HERC4-201ENST00000277817 HSPB9Q9BQS6 159 aa2.34□□□□□ -2.03
HERC4-201ENST00000277817 GGACTQ9BVM4 153 aa2.34□□□□□ -2.03
HERC4-201ENST00000277817 REG4Q9BYZ8 158 aa2.34□□□□□ -2.03
HERC4-201ENST00000277817 CYTL1Q9NRR1 136 aa2.34□□□□□ -2.03
HERC4-201ENST00000277817 IDI2-AS1Q9NZ38 188 aa2.34□□□□□ -2.03
HERC4-201ENST00000277817 AMMECR1Q9Y4X0 333 aaPredicted RBP2.34□□□□□ -2.03
HERC4-201ENST00000277817 YTHDF2Q9Y5A9 579 aaKnown RBP2.34□□□□□ -2.03
HERC4-201ENST00000277817 TMEM56-RWDD3S4R434 201 aa2.34□□□□□ -2.03
HERC4-201ENST00000277817 DNAH14Q0VDD8 3507 aa2.34□□□□□ -2.03
HERC4-201ENST00000277817 DOPEY2Q9Y3R5 2298 aa2.34□□□□□ -2.03
HERC4-201ENST00000277817 HIVEP2P31629 2446 aa2.34□□□□□ -2.03
HERC4-201ENST00000277817 BMPR1BO00238 502 aa2.34□□□□□ -2.03
HERC4-201ENST00000277817 FGF16O43320 207 aa2.34□□□□□ -2.03
HERC4-201ENST00000277817 KBTBD11O94819 623 aa2.34□□□□□ -2.03
HERC4-201ENST00000277817 CA2P00918 260 aa2.34□□□□□ -2.03
HERC4-201ENST00000277817 HIST1H1EP10412 219 aaKnown RBP2.34□□□□□ -2.03
HERC4-201ENST00000277817 HIST1H1BP16401 226 aaKnown RBP2.34□□□□□ -2.03
HERC4-201ENST00000277817 SRP14P37108 136 aaKnown RBP2.34□□□□□ -2.03
HERC4-201ENST00000277817 RPL27AP46776 148 aaKnown RBP2.34□□□□□ -2.03
HERC4-201ENST00000277817 LGALS7P47929 136 aa2.34□□□□□ -2.03
HERC4-201ENST00000277817 TCTAP57738 103 aa2.34□□□□□ -2.03
HERC4-201ENST00000277817 ARF6P62330 175 aa2.34□□□□□ -2.03
HERC4-201ENST00000277817 Q0VFX4 171 aa2.34□□□□□ -2.03
HERC4-201ENST00000277817 TIMM23BQ5SRD1 257 aa2.34□□□□□ -2.03
HERC4-201ENST00000277817 IBA57Q5T440 356 aaKnown RBP2.34□□□□□ -2.03
HERC4-201ENST00000277817 FAM216BQ8N7L0 139 aa2.34□□□□□ -2.03
HERC4-201ENST00000277817 C9orf106Q8NAJ2 232 aa2.34□□□□□ -2.03
HERC4-201ENST00000277817 STXBP6Q8NFX7 210 aa2.34□□□□□ -2.03
HERC4-201ENST00000277817 OR1P1Q8NH06 330 aa2.34□□□□□ -2.03
HERC4-201ENST00000277817 STARD4Q96DR4 205 aa2.34□□□□□ -2.03
HERC4-201ENST00000277817 NPCDR1Q9BY65 106 aa2.34□□□□□ -2.03
HERC4-201ENST00000277817 ANKHD1Q8IWZ3 2542 aaKnown RBP2.34□□□□□ -2.04
HERC4-201ENST00000277817 DNAH7Q8WXX0 4024 aa2.34□□□□□ -2.04
HERC4-201ENST00000277817 TRGV11A0A075B6L2 103 aa2.34□□□□□ -2.04
HERC4-201ENST00000277817 SLC17A3O00476 420 aa2.34□□□□□ -2.04
HERC4-201ENST00000277817 NTN3O00634 580 aaPredicted RBP2.34□□□□□ -2.04
HERC4-201ENST00000277817 TCAPO15273 167 aa2.34□□□□□ -2.04
HERC4-201ENST00000277817 PRSS1P07477 247 aa2.34□□□□□ -2.04
HERC4-201ENST00000277817 ZNF25P17030 456 aaPredicted RBP2.34□□□□□ -2.04
HERC4-201ENST00000277817 GATA2P23769 480 aaPredicted RBP2.34□□□□□ -2.04
HERC4-201ENST00000277817 BRS3P32247 399 aa2.34□□□□□ -2.04
HERC4-201ENST00000277817 PRB3Q04118 309 aaPredicted RBP2.34□□□□□ -2.04
HERC4-201ENST00000277817 ELOBQ15370 118 aa2.34□□□□□ -2.04
HERC4-201ENST00000277817 MRPL23Q16540 153 aaKnown RBP2.34□□□□□ -2.04
HERC4-201ENST00000277817 CLDND2Q8NHS1 167 aa2.34□□□□□ -2.04
HERC4-201ENST00000277817 NABP2Q9BQ15 211 aa2.34□□□□□ -2.04
HERC4-201ENST00000277817 VPS25Q9BRG1 176 aa2.34□□□□□ -2.04
HERC4-201ENST00000277817 PSMG3Q9BT73 122 aaPredicted RBP2.34□□□□□ -2.04
HERC4-201ENST00000277817 METTL1Q9UBP6 276 aaKnown RBP2.34□□□□□ -2.04
HERC4-201ENST00000277817 JPT1Q9UK76 154 aa2.34□□□□□ -2.04
HERC4-201ENST00000277817 MRPS18CQ9Y3D5 142 aaKnown RBP2.34□□□□□ -2.04
HERC4-201ENST00000277817 MED13LQ71F56 2210 aa2.34□□□□□ -2.04
HERC4-201ENST00000277817 SHANK1Q9Y566 2161 aa2.34□□□□□ -2.04
HERC4-201ENST00000277817 ITPR1Q14643 2758 aa2.34□□□□□ -2.04
HERC4-201ENST00000277817 DIDO1Q9BTC0 2240 aaKnown RBP2.33□□□□□ -2.04
HERC4-201ENST00000277817 IGHV2OR16-5A0A0B4J2B6 119 aa2.33□□□□□ -2.04
HERC4-201ENST00000277817 IGHV3-35A0A0C4DH35 117 aa2.33□□□□□ -2.04
HERC4-201ENST00000277817 LOC389332A0A1B0GUA5 103 aa2.33□□□□□ -2.04
HERC4-201ENST00000277817 CGAP01215 116 aa2.33□□□□□ -2.04
HERC4-201ENST00000277817 SMIM17P0DL12 118 aa2.33□□□□□ -2.04
HERC4-201ENST00000277817 C8orf88P0DMB2 117 aa2.33□□□□□ -2.04
HERC4-201ENST00000277817 GATA1P15976 413 aaPredicted RBP2.33□□□□□ -2.04
HERC4-201ENST00000277817 LMO1P25800 156 aa2.33□□□□□ -2.04
HERC4-201ENST00000277817 GLRXP35754 106 aa2.33□□□□□ -2.04
HERC4-201ENST00000277817 ECSCRQ19T08 205 aa2.33□□□□□ -2.04
HERC4-201ENST00000277817 TREML4Q6UXN2 200 aa2.33□□□□□ -2.04
HERC4-201ENST00000277817 DOLPP1Q86YN1 238 aa2.33□□□□□ -2.04
HERC4-201ENST00000277817 ZNF525Q8N782 197 aa2.33□□□□□ -2.04
HERC4-201ENST00000277817 OR51G1Q8NGK1 321 aa2.33□□□□□ -2.04
HERC4-201ENST00000277817 OR4C13Q8NGP0 309 aa2.33□□□□□ -2.04
HERC4-201ENST00000277817 LINC01560Q8TB33 94 aa2.33□□□□□ -2.04
HERC4-201ENST00000277817 SFRP2Q96HF1 295 aa2.33□□□□□ -2.04
HERC4-201ENST00000277817 HEATR1Q9H583 2144 aaKnown RBP2.33□□□□□ -2.04
HERC4-201ENST00000277817 VSIRQ9H7M9 311 aa2.33□□□□□ -2.04
HERC4-201ENST00000277817 HIGD1AQ9Y241 93 aa2.33□□□□□ -2.04
HERC4-201ENST00000277817 CBY1Q9Y3M2 126 aa2.33□□□□□ -2.04
HERC4-201ENST00000277817 ABCA1O95477 2261 aa2.33□□□□□ -2.04
HERC4-201ENST00000277817 MAST4O15021 2626 aa2.33□□□□□ -2.04
HERC4-201ENST00000277817 GAGE12JA6NER3 117 aa2.33□□□□□ -2.04
HERC4-201ENST00000277817 A6NNC1 897 aa2.33□□□□□ -2.04
HERC4-201ENST00000277817 TMEM250H0YL14 139 aa2.33□□□□□ -2.04
HERC4-201ENST00000277817 ISLRO14498 428 aa2.33□□□□□ -2.04
HERC4-201ENST00000277817 IGHV4-31P0DP07 118 aa2.33□□□□□ -2.04
HERC4-201ENST00000277817 HTN1P15515 57 aa2.33□□□□□ -2.04
HERC4-201ENST00000277817 CBLN1P23435 193 aa2.33□□□□□ -2.04
HERC4-201ENST00000277817 GCHFRP30047 84 aa2.33□□□□□ -2.04
HERC4-201ENST00000277817 ATP5G3P48201 142 aa2.33□□□□□ -2.04
HERC4-201ENST00000277817 CD81P60033 236 aa2.33□□□□□ -2.04
HERC4-201ENST00000277817 FOXF2Q12947 444 aa2.33□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms