RNA–Protein interactions for RNA: ENST00000264012.8

CDH3-201, Transcript of cadherin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDH3, Length 4,929 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3-201ENST00000264012 IGKV1-6A0A0C4DH72 117 aa11.47□□□□□ -0.57
CDH3-201ENST00000264012 E7EQL1 145 aa11.47□□□□□ -0.57
CDH3-201ENST00000264012 TCF23Q7RTU1 214 aa11.47□□□□□ -0.57
CDH3-201ENST00000264012 RNF5Q99942 180 aa11.47□□□□□ -0.57
CDH3-201ENST00000264012 MBNL3Q9NUK0 354 aaKnown RBP11.47□□□□□ -0.57
CDH3-201ENST00000264012 TMEM238LA0A1B0GVL6 79 aa11.47□□□□□ -0.57
CDH3-201ENST00000264012 A6NJY4 79 aa11.47□□□□□ -0.57
CDH3-201ENST00000264012 OOSP1A8MZH6 123 aa11.47□□□□□ -0.57
CDH3-201ENST00000264012 COL8A2P25067 703 aa11.47□□□□□ -0.57
CDH3-201ENST00000264012 MINOS1Q5TGZ0 78 aa11.47□□□□□ -0.57
CDH3-201ENST00000264012 SPATA31B1PQ5VZV4 182 aa11.47□□□□□ -0.57
CDH3-201ENST00000264012 ZNF414Q96IQ9 312 aa11.47□□□□□ -0.57
CDH3-201ENST00000264012 C18orf15Q96N68 181 aa11.47□□□□□ -0.57
CDH3-201ENST00000264012 PSG8Q9UQ74 426 aa11.47□□□□□ -0.57
CDH3-201ENST00000264012 MINOS1-NBL1R4GNA1 71 aa11.47□□□□□ -0.57
CDH3-201ENST00000264012 TRBV24-1A0A075B6N3 115 aa11.47□□□□□ -0.57
CDH3-201ENST00000264012 FAM181BA6NEQ2 426 aa11.47□□□□□ -0.57
CDH3-201ENST00000264012 GCSHP23434 173 aa11.47□□□□□ -0.57
CDH3-201ENST00000264012 TEX38Q6PEX7 206 aa11.47□□□□□ -0.57
CDH3-201ENST00000264012 MGST2Q99735 147 aa11.47□□□□□ -0.57
CDH3-201ENST00000264012 SHANK1Q9Y566 2161 aa11.46□□□□□ -0.57
CDH3-201ENST00000264012 NTF4P34130 210 aa11.46□□□□□ -0.57
CDH3-201ENST00000264012 LOC102724200A0A096LPH7 203 aaPredicted RBP11.46□□□□□ -0.57
CDH3-201ENST00000264012 RNASE4P34096 147 aaKnown RBP11.46□□□□□ -0.57
CDH3-201ENST00000264012 SAMD13Q5VXD3 122 aa11.46□□□□□ -0.57
CDH3-201ENST00000264012 SEPSECSQ9HD40 501 aaKnown RBP11.46□□□□□ -0.57
CDH3-201ENST00000264012 PSG1P11464 419 aa11.46□□□□□ -0.58
CDH3-201ENST00000264012 CTAG1AP78358 180 aa11.46□□□□□ -0.58
CDH3-201ENST00000264012 ASCL2Q99929 193 aa11.46□□□□□ -0.58
CDH3-201ENST00000264012 A0A1W2PRX2 142 aa11.46□□□□□ -0.58
CDH3-201ENST00000264012 VDAC2P45880 294 aaPredicted RBP11.46□□□□□ -0.58
CDH3-201ENST00000264012 LHFPL4Q7Z7J7 247 aa11.46□□□□□ -0.58
CDH3-201ENST00000264012 TMEM219Q86XT9 240 aa11.46□□□□□ -0.58
CDH3-201ENST00000264012 ORMDL3Q8N138 153 aa11.46□□□□□ -0.58
CDH3-201ENST00000264012 MOB4Q9Y3A3 225 aa11.46□□□□□ -0.58
CDH3-201ENST00000264012 TRAV41A0A0B4J266 112 aa11.45□□□□□ -0.58
CDH3-201ENST00000264012 BUB1B-PAK6H3BSN5 160 aa11.45□□□□□ -0.58
CDH3-201ENST00000264012 TNFSF13O75888 250 aa11.45□□□□□ -0.58
CDH3-201ENST00000264012 RSPO1Q2MKA7 263 aaPredicted RBP11.45□□□□□ -0.58
CDH3-201ENST00000264012 PAPPA-AS1Q5QFB9 102 aa11.45□□□□□ -0.58
CDH3-201ENST00000264012 LURAP1LQ8IV03 231 aa11.45□□□□□ -0.58
CDH3-201ENST00000264012 RAB37Q96AX2 223 aa11.45□□□□□ -0.58
CDH3-201ENST00000264012 JMJD8Q96S16 334 aa11.45□□□□□ -0.58
CDH3-201ENST00000264012 ZNF503-AS2A6NEH8 195 aa11.45□□□□□ -0.58
CDH3-201ENST00000264012 C15orf32Q32M92 178 aa11.45□□□□□ -0.58
CDH3-201ENST00000264012 FAM19A2Q8N3H0 131 aa11.45□□□□□ -0.58
CDH3-201ENST00000264012 KIR3DL3Q8N743 410 aa11.45□□□□□ -0.58
CDH3-201ENST00000264012 HIST1H4GQ99525 98 aa11.45□□□□□ -0.58
CDH3-201ENST00000264012 H7C1H1 209 aa11.45□□□□□ -0.58
CDH3-201ENST00000264012 M0R1W7 72 aa11.45□□□□□ -0.58
CDH3-201ENST00000264012 PPP1R17O96001 155 aa11.45□□□□□ -0.58
CDH3-201ENST00000264012 PRSS2P07478 247 aa11.45□□□□□ -0.58
CDH3-201ENST00000264012 DSCR9P59020 149 aa11.45□□□□□ -0.58
CDH3-201ENST00000264012 PAX8Q06710 450 aa11.45□□□□□ -0.58
CDH3-201ENST00000264012 C5orf64Q2M2E5 130 aa11.45□□□□□ -0.58
CDH3-201ENST00000264012 ZNF585BQ52M93 769 aa11.45□□□□□ -0.58
CDH3-201ENST00000264012 A0A1B0GWJ7 208 aa11.45□□□□□ -0.58
CDH3-201ENST00000264012 FAM71F2Q6NXP2 309 aa11.45□□□□□ -0.58
CDH3-201ENST00000264012 GLMPQ8WWB7 406 aa11.45□□□□□ -0.58
CDH3-201ENST00000264012 SSBP4Q9BWG4 385 aaPredicted RBP11.45□□□□□ -0.58
CDH3-201ENST00000264012 C15orf62A8K5M9 175 aa11.44□□□□□ -0.58
CDH3-201ENST00000264012 LYL1P12980 280 aa11.44□□□□□ -0.58
CDH3-201ENST00000264012 LGALS3P17931 250 aaKnown RBP11.44□□□□□ -0.58
CDH3-201ENST00000264012 KLF17Q5JT82 389 aaPredicted RBP11.44□□□□□ -0.58
CDH3-201ENST00000264012 DNLZQ5SXM8 178 aa11.44□□□□□ -0.58
CDH3-201ENST00000264012 DUX3Q96PT4 197 aa11.44□□□□□ -0.58
CDH3-201ENST00000264012 PMCHL2Q9BQD1 86 aa11.44□□□□□ -0.58
CDH3-201ENST00000264012 AGMATQ9BSE5 352 aa11.44□□□□□ -0.58
CDH3-201ENST00000264012 PEMTQ9UBM1 199 aa11.44□□□□□ -0.58
CDH3-201ENST00000264012 F11RQ9Y624 299 aaKnown RBP11.44□□□□□ -0.58
CDH3-201ENST00000264012 Q6ZR03 302 aa11.44□□□□□ -0.58
CDH3-201ENST00000264012 HIST3H2BBQ8N257 126 aa11.44□□□□□ -0.58
CDH3-201ENST00000264012 CRIM1Q9NZV1 1036 aa11.44□□□□□ -0.58
CDH3-201ENST00000264012 SIGLEC9Q9Y336 463 aa11.44□□□□□ -0.58
CDH3-201ENST00000264012 H3BVH4 76 aa11.44□□□□□ -0.58
CDH3-201ENST00000264012 SERF1AO75920 110 aa11.44□□□□□ -0.58
CDH3-201ENST00000264012 IGKV1-16P04430 117 aa11.44□□□□□ -0.58
CDH3-201ENST00000264012 PAX1P15863 534 aa11.44□□□□□ -0.58
CDH3-201ENST00000264012 LMO1P25800 156 aa11.44□□□□□ -0.58
CDH3-201ENST00000264012 PMS2P5A8MQ11 134 aa11.43□□□□□ -0.58
CDH3-201ENST00000264012 HIST1H2BLQ99880 126 aa11.43□□□□□ -0.58
CDH3-201ENST00000264012 GTF3C1Q12789 2109 aa11.43□□□□□ -0.58
CDH3-201ENST00000264012 TMEM160Q9NX00 188 aa11.43□□□□□ -0.58
CDH3-201ENST00000264012 GEMIN7Q9H840 131 aaKnown RBP11.43□□□□□ -0.58
CDH3-201ENST00000264012 TNFRSF18Q9Y5U5 241 aa11.43□□□□□ -0.58
CDH3-201ENST00000264012 FAM208BQ5VWN6 2430 aa11.43□□□□□ -0.58
CDH3-201ENST00000264012 H7C2G1 150 aa11.43□□□□□ -0.58
CDH3-201ENST00000264012 NPFFO15130 113 aa11.43□□□□□ -0.58
CDH3-201ENST00000264012 BRD3OSQ6XYD6 125 aa11.43□□□□□ -0.58
CDH3-201ENST00000264012 TRGV9Q99603 122 aa11.43□□□□□ -0.58
CDH3-201ENST00000264012 PLXND1Q9Y4D7 1925 aa11.43□□□□□ -0.58
CDH3-201ENST00000264012 OR11H12B2RN74 326 aa11.42□□□□□ -0.58
CDH3-201ENST00000264012 B4DSR2 109 aa11.42□□□□□ -0.58
CDH3-201ENST00000264012 CA1P00915 261 aaPredicted RBP11.42□□□□□ -0.58
CDH3-201ENST00000264012 ADMP35318 185 aa11.42□□□□□ -0.58
CDH3-201ENST00000264012 OR11H1Q8NG94 326 aa11.42□□□□□ -0.58
CDH3-201ENST00000264012 OR11H2Q8NH07 326 aa11.42□□□□□ -0.58
CDH3-201ENST00000264012 SCRT1Q9BWW7 348 aa11.42□□□□□ -0.58
CDH3-201ENST00000264012 FABP2P12104 132 aa11.42□□□□□ -0.58
CDH3-201ENST00000264012 CEACAM8P31997 349 aaPredicted RBP11.42□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 50.4 ms