RNA–Protein interactions for RNA: ENST00000261889.9

SNX1-201, Transcript of sorting nexin 1, humanhuman

TSL 2 BASIC

Gene SNX1, Length 3,373 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-201ENST00000261889 K7EMI3 77 aa10.49□□□□□ -0.73
SNX1-201ENST00000261889 PEX7O00628 323 aa10.49□□□□□ -0.73
SNX1-201ENST00000261889 HLA-DQA1P01909 254 aa10.49□□□□□ -0.73
SNX1-201ENST00000261889 RBX1P62877 108 aa10.49□□□□□ -0.73
SNX1-201ENST00000261889 TMEM177Q53S58 311 aa10.49□□□□□ -0.73
SNX1-201ENST00000261889 C10orf113Q5VZT2 155 aa10.49□□□□□ -0.73
SNX1-201ENST00000261889 TCTEX1D1Q8N7M0 179 aa10.49□□□□□ -0.73
SNX1-201ENST00000261889 IZUMO1RA6ND01 250 aa10.48□□□□□ -0.73
SNX1-201ENST00000261889 FAM106CPP0CH98 169 aa10.48□□□□□ -0.73
SNX1-201ENST00000261889 TBR1Q16650 682 aa10.48□□□□□ -0.73
SNX1-201ENST00000261889 FAM106AQ4KMX7 169 aa10.48□□□□□ -0.73
SNX1-201ENST00000261889 WDR73Q6P4I2 378 aa10.48□□□□□ -0.73
SNX1-201ENST00000261889 ANKHD1Q8IWZ3 2542 aaKnown RBP10.48□□□□□ -0.73
SNX1-201ENST00000261889 SMIM27A0A1W2PRY6 76 aa10.48□□□□□ -0.73
SNX1-201ENST00000261889 DEFB109BQ30KR1 87 aa10.48□□□□□ -0.73
SNX1-201ENST00000261889 GTSF1Q8WW33 167 aa10.48□□□□□ -0.73
SNX1-201ENST00000261889 OSTCQ9NRP0 149 aa10.48□□□□□ -0.73
SNX1-201ENST00000261889 BET1LQ9NYM9 111 aa10.48□□□□□ -0.73
SNX1-201ENST00000261889 DSCAML1Q8TD84 2053 aa10.48□□□□□ -0.73
SNX1-201ENST00000261889 RAI1Q7Z5J4 1906 aaPredicted RBP10.48□□□□□ -0.73
SNX1-201ENST00000261889 UPK2O00526 184 aa10.48□□□□□ -0.73
SNX1-201ENST00000261889 ESDP10768 282 aa10.48□□□□□ -0.73
SNX1-201ENST00000261889 TNFAIP6P98066 277 aaPredicted RBP10.48□□□□□ -0.73
SNX1-201ENST00000261889 FBLN7Q53RD9 439 aa10.48□□□□□ -0.73
SNX1-201ENST00000261889 BHLHA15Q7RTS1 189 aaPredicted RBP10.48□□□□□ -0.73
SNX1-201ENST00000261889 ZNF329Q86UD4 541 aa10.48□□□□□ -0.73
SNX1-201ENST00000261889 MBD6Q96DN6 1003 aa10.48□□□□□ -0.73
SNX1-201ENST00000261889 LINC00614P0C842 121 aa10.47□□□□□ -0.73
SNX1-201ENST00000261889 KLF3P57682 345 aaPredicted RBP10.47□□□□□ -0.73
SNX1-201ENST00000261889 AMMECR1LQ6DCA0 310 aa10.47□□□□□ -0.73
SNX1-201ENST00000261889 CORO2AQ92828 525 aa10.47□□□□□ -0.73
SNX1-201ENST00000261889 C17orf77Q96MU5 243 aa10.47□□□□□ -0.73
SNX1-201ENST00000261889 VPS25Q9BRG1 176 aa10.47□□□□□ -0.73
SNX1-201ENST00000261889 FOXA2Q9Y261 457 aaPredicted RBP10.47□□□□□ -0.73
SNX1-201ENST00000261889 HILPDAQ9Y5L2 63 aa10.47□□□□□ -0.73
SNX1-201ENST00000261889 COX11Q9Y6N1 276 aa10.47□□□□□ -0.73
SNX1-201ENST00000261889 C2orf70A6NJV1 201 aa10.47□□□□□ -0.73
SNX1-201ENST00000261889 C21orf140B9A014 251 aa10.47□□□□□ -0.73
SNX1-201ENST00000261889 TMPRSS3P57727 454 aa10.47□□□□□ -0.73
SNX1-201ENST00000261889 PRCDQ00LT1 54 aa10.47□□□□□ -0.73
SNX1-201ENST00000261889 CD69Q07108 199 aa10.47□□□□□ -0.73
SNX1-201ENST00000261889 GAGE1Q13065 139 aa10.47□□□□□ -0.73
SNX1-201ENST00000261889 PRNTQ86SH4 94 aa10.47□□□□□ -0.73
SNX1-201ENST00000261889 TMEM178AQ8NBL3 297 aa10.47□□□□□ -0.73
SNX1-201ENST00000261889 OR4F17Q8NGA8 305 aa10.47□□□□□ -0.73
SNX1-201ENST00000261889 PRR7Q8TB68 274 aa10.47□□□□□ -0.73
SNX1-201ENST00000261889 FER1L6-AS2Q96M78 137 aa10.47□□□□□ -0.73
SNX1-201ENST00000261889 DKK4Q9UBT3 224 aa10.47□□□□□ -0.73
SNX1-201ENST00000261889 IGHV3-35A0A0C4DH35 117 aa10.46□□□□□ -0.73
SNX1-201ENST00000261889 TAS2R45P59539 299 aa10.46□□□□□ -0.73
SNX1-201ENST00000261889 OR10J3Q5JRS4 329 aa10.46□□□□□ -0.73
SNX1-201ENST00000261889 ZNF738Q8NE65 137 aa10.46□□□□□ -0.73
SNX1-201ENST00000261889 LYNX1G3V0Z9 82 aa10.46□□□□□ -0.73
SNX1-201ENST00000261889 LYNX1P0DP58 116 aa10.46□□□□□ -0.73
SNX1-201ENST00000261889 OR10X1Q8NGY0 326 aa10.46□□□□□ -0.73
SNX1-201ENST00000261889 PROCRQ9UNN8 238 aa10.46□□□□□ -0.73
SNX1-201ENST00000261889 TRAV9-2A0A087WT02 112 aa10.46□□□□□ -0.74
SNX1-201ENST00000261889 IGHV1-24A0A0C4DH33 117 aa10.46□□□□□ -0.74
SNX1-201ENST00000261889 APOA2P02652 100 aa10.46□□□□□ -0.74
SNX1-201ENST00000261889 ZNF474Q6S9Z5 364 aaPredicted RBP10.46□□□□□ -0.74
SNX1-201ENST00000261889 PRSS57Q6UWY2 283 aa10.46□□□□□ -0.74
SNX1-201ENST00000261889 LYPD2Q6UXB3 125 aa10.46□□□□□ -0.74
SNX1-201ENST00000261889 SEM1Q6ZVN7 128 aa10.46□□□□□ -0.74
SNX1-201ENST00000261889 PPP1R35Q8TAP8 253 aa10.46□□□□□ -0.74
SNX1-201ENST00000261889 ZNF430Q9H8G1 570 aaPredicted RBP10.46□□□□□ -0.74
SNX1-201ENST00000261889 FCN3O75636 299 aa10.45□□□□□ -0.74
SNX1-201ENST00000261889 NCR2O95944 276 aa10.45□□□□□ -0.74
SNX1-201ENST00000261889 LYZP61626 148 aa10.45□□□□□ -0.74
SNX1-201ENST00000261889 RTL8BQ17RB0 113 aa10.45□□□□□ -0.74
SNX1-201ENST00000261889 C22orf15Q8WYQ4 148 aa10.45□□□□□ -0.74
SNX1-201ENST00000261889 RAB37Q96AX2 223 aa10.45□□□□□ -0.74
SNX1-201ENST00000261889 C22orf46C9J442 243 aa10.45□□□□□ -0.74
SNX1-201ENST00000261889 PPIAL4DF5H284 164 aa10.45□□□□□ -0.74
SNX1-201ENST00000261889 MT-ND6P03923 174 aa10.45□□□□□ -0.74
SNX1-201ENST00000261889 ZNF257Q9Y2Q1 563 aa10.45□□□□□ -0.74
SNX1-201ENST00000261889 TRGV8A0A0C4DH27 118 aa10.45□□□□□ -0.74
SNX1-201ENST00000261889 ZNF891A8MT65 544 aaPredicted RBP10.45□□□□□ -0.74
SNX1-201ENST00000261889 K7EM74 188 aa10.45□□□□□ -0.74
SNX1-201ENST00000261889 F2RL2O00254 374 aa10.45□□□□□ -0.74
SNX1-201ENST00000261889 RIPPLY3P57055 190 aa10.45□□□□□ -0.74
SNX1-201ENST00000261889 UBE2V1Q13404 147 aa10.45□□□□□ -0.74
SNX1-201ENST00000261889 IGFL4Q6B9Z1 124 aa10.45□□□□□ -0.74
SNX1-201ENST00000261889 GOLT1AQ6ZVE7 132 aa10.45□□□□□ -0.74
SNX1-201ENST00000261889 BCL6BQ8N143 479 aaPredicted RBP10.45□□□□□ -0.74
SNX1-201ENST00000261889 GAFA1Q96PS6 74 aa10.45□□□□□ -0.74
SNX1-201ENST00000261889 ZNF71Q9NQZ8 489 aaPredicted RBP10.45□□□□□ -0.74
SNX1-201ENST00000261889 VPS13CQ709C8 3753 aa10.44□□□□□ -0.74
SNX1-201ENST00000261889 NKX6-3A6NJ46 265 aa10.44□□□□□ -0.74
SNX1-201ENST00000261889 CGB1A6NKQ9 187 aa10.44□□□□□ -0.74
SNX1-201ENST00000261889 LEPROTL1O95214 131 aa10.44□□□□□ -0.74
SNX1-201ENST00000261889 LOXL1Q08397 574 aaPredicted RBP10.44□□□□□ -0.74
SNX1-201ENST00000261889 PDPNQ86YL7 162 aa10.44□□□□□ -0.74
SNX1-201ENST00000261889 WFDC8Q8IUA0 241 aa10.44□□□□□ -0.74
SNX1-201ENST00000261889 KLHDC1Q8N7A1 406 aa10.44□□□□□ -0.74
SNX1-201ENST00000261889 OR8A1Q8NGG7 326 aa10.44□□□□□ -0.74
SNX1-201ENST00000261889 TMUB1Q9BVT8 246 aa10.44□□□□□ -0.74
SNX1-201ENST00000261889 RPUSD1Q9UJJ7 312 aaKnown RBP10.44□□□□□ -0.74
SNX1-201ENST00000261889 PRNDQ9UKY0 176 aa10.44□□□□□ -0.74
SNX1-201ENST00000261889 A0A1W2PRE2 83 aa10.44□□□□□ -0.74
SNX1-201ENST00000261889 IGHV1-46P01743 117 aa10.44□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms