RNA–Protein interactions for RNA: ENST00000258781.10

CCM2-201, Transcript of CCM2 scaffold protein, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CCM2, Length 1,894 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-201ENST00000258781 FANCD2OSQ96PS1 177 aa21.8■■□□□ 1.08
CCM2-201ENST00000258781 TEX15Q9BXT5 2789 aa21.8■■□□□ 1.08
CCM2-201ENST00000258781 TRAV5A0A0B4J249 113 aa21.79■■□□□ 1.08
CCM2-201ENST00000258781 TRAV20A0A0B4J274 112 aa21.79■■□□□ 1.08
CCM2-201ENST00000258781 HYPMO75409 117 aa21.79■■□□□ 1.08
CCM2-201ENST00000258781 LINC00305Q7Z4B0 112 aa21.79■■□□□ 1.08
CCM2-201ENST00000258781 MEGF9Q9H1U4 602 aa21.79■■□□□ 1.08
CCM2-201ENST00000258781 IGHV3OR16-10A0A075B7F0 116 aa21.79■■□□□ 1.08
CCM2-201ENST00000258781 SCO2A0A1W2PP80 73 aa21.79■■□□□ 1.08
CCM2-201ENST00000258781 A0A1W2PRE2 83 aa21.79■■□□□ 1.08
CCM2-201ENST00000258781 CRYBA1P05813 215 aa21.79■■□□□ 1.08
CCM2-201ENST00000258781 ORM2P19652 201 aa21.79■■□□□ 1.08
CCM2-201ENST00000258781 GATA3P23771 443 aa21.79■■□□□ 1.08
CCM2-201ENST00000258781 OR1B1Q8NGR6 318 aa21.79■■□□□ 1.08
CCM2-201ENST00000258781 GSX1Q9H4S2 264 aaPredicted RBP21.79■■□□□ 1.08
CCM2-201ENST00000258781 C7orf69Q9H7B7 122 aa21.79■■□□□ 1.08
CCM2-201ENST00000258781 UBE2L3P68036 154 aaKnown RBP21.78■■□□□ 1.08
CCM2-201ENST00000258781 STXBP6Q8NFX7 210 aa21.78■■□□□ 1.08
CCM2-201ENST00000258781 ZNF48Q96MX3 618 aaPredicted RBP21.78■■□□□ 1.08
CCM2-201ENST00000258781 OR10J4P0C629 311 aa21.77■■□□□ 1.08
CCM2-201ENST00000258781 IGHV4-31P0DP07 118 aa21.77■■□□□ 1.08
CCM2-201ENST00000258781 TIGITQ495A1 244 aa21.77■■□□□ 1.08
CCM2-201ENST00000258781 KLF17Q5JT82 389 aaPredicted RBP21.77■■□□□ 1.08
CCM2-201ENST00000258781 PAXXQ9BUH6 204 aa21.77■■□□□ 1.08
CCM2-201ENST00000258781 THYN1Q9P016 225 aa21.77■■□□□ 1.08
CCM2-201ENST00000258781 NOTCH2Q04721 2471 aa21.77■■□□□ 1.08
CCM2-201ENST00000258781 CLDN34H7C241 214 aa21.77■■□□□ 1.08
CCM2-201ENST00000258781 IGKV1-17P01599 117 aa21.77■■□□□ 1.08
CCM2-201ENST00000258781 BRD3OSQ6XYD6 125 aa21.77■■□□□ 1.08
CCM2-201ENST00000258781 SGMS2Q8NHU3 365 aa21.77■■□□□ 1.08
CCM2-201ENST00000258781 HSPB9Q9BQS6 159 aa21.77■■□□□ 1.08
CCM2-201ENST00000258781 DERL1Q9BUN8 251 aa21.77■■□□□ 1.08
CCM2-201ENST00000258781 CSPG4Q6UVK1 2322 aa21.77■■□□□ 1.07
CCM2-201ENST00000258781 AVPP01185 164 aa21.76■■□□□ 1.07
CCM2-201ENST00000258781 IGHV4-38-2P0DP08 117 aa21.76■■□□□ 1.07
CCM2-201ENST00000258781 PSG1P11464 419 aa21.76■■□□□ 1.07
CCM2-201ENST00000258781 FOXC2Q99958 501 aa21.76■■□□□ 1.07
CCM2-201ENST00000258781 OR51M1Q9H341 326 aa21.76■■□□□ 1.07
CCM2-201ENST00000258781 MLXQ9UH92 298 aa21.76■■□□□ 1.07
CCM2-201ENST00000258781 A0A0U1RQK1 487 aa21.75■■□□□ 1.07
CCM2-201ENST00000258781 RAB5AP20339 215 aa21.75■■□□□ 1.07
CCM2-201ENST00000258781 CIARTQ8N365 385 aaPredicted RBP21.75■■□□□ 1.07
CCM2-201ENST00000258781 TRAV30A0A087WSZ9 112 aa21.75■■□□□ 1.07
CCM2-201ENST00000258781 TGFAP01135 160 aa21.75■■□□□ 1.07
CCM2-201ENST00000258781 MFAP4P55083 255 aa21.75■■□□□ 1.07
CCM2-201ENST00000258781 FLI1Q01543 452 aaPredicted RBP21.75■■□□□ 1.07
CCM2-201ENST00000258781 C5orf56Q8N8D9 126 aa21.75■■□□□ 1.07
CCM2-201ENST00000258781 FAM110DQ8TAY7 271 aaPredicted RBP21.75■■□□□ 1.07
CCM2-201ENST00000258781 MOB4Q9Y3A3 225 aa21.75■■□□□ 1.07
CCM2-201ENST00000258781 ELOBQ15370 118 aa21.74■■□□□ 1.07
CCM2-201ENST00000258781 HIGD1AQ9Y241 93 aa21.74■■□□□ 1.07
CCM2-201ENST00000258781 MYO9AB2RTY4 2548 aa21.74■■□□□ 1.07
CCM2-201ENST00000258781 RD3LP0DJH9 198 aa21.73■■□□□ 1.07
CCM2-201ENST00000258781 HIST1H1BP16401 226 aaKnown RBP21.73■■□□□ 1.07
CCM2-201ENST00000258781 KLK9Q2XQG4 91 aa21.73■■□□□ 1.07
CCM2-201ENST00000258781 LINC01551Q86U37 167 aa21.73■■□□□ 1.07
CCM2-201ENST00000258781 PIFOQ8TCI5 191 aa21.73■■□□□ 1.07
CCM2-201ENST00000258781 KLK9Q9UKQ9 250 aa21.73■■□□□ 1.07
CCM2-201ENST00000258781 GGTLC3B5MD39 225 aa21.73■■□□□ 1.07
CCM2-201ENST00000258781 PYYP10082 97 aa21.73■■□□□ 1.07
CCM2-201ENST00000258781 OR5T1Q8NG75 326 aa21.73■■□□□ 1.07
CCM2-201ENST00000258781 FXYD5Q96DB9 178 aa21.73■■□□□ 1.07
CCM2-201ENST00000258781 TMEM68Q96MH6 324 aa21.73■■□□□ 1.07
CCM2-201ENST00000258781 TOMM40O96008 361 aa21.72■■□□□ 1.07
CCM2-201ENST00000258781 TLN2Q9Y4G6 2542 aa21.71■■□□□ 1.07
CCM2-201ENST00000258781 ATP6V0E1O15342 81 aa21.71■■□□□ 1.07
CCM2-201ENST00000258781 LYZP61626 148 aa21.71■■□□□ 1.07
CCM2-201ENST00000258781 C16orf82Q7Z2V1 217 aa21.71■■□□□ 1.07
CCM2-201ENST00000258781 Q8WTZ3 238 aa21.71■■□□□ 1.07
CCM2-201ENST00000258781 ANAPC16Q96DE5 110 aa21.71■■□□□ 1.07
CCM2-201ENST00000258781 C9JCJ5 164 aa21.71■■□□□ 1.07
CCM2-201ENST00000258781 YPEL3P61236 119 aaPredicted RBP21.71■■□□□ 1.07
CCM2-201ENST00000258781 ZNF343Q6P1L6 599 aa21.71■■□□□ 1.07
CCM2-201ENST00000258781 UNQ5815/PRO19632Q6UWF5 114 aa21.71■■□□□ 1.07
CCM2-201ENST00000258781 C21orf62Q9NYP8 219 aa21.71■■□□□ 1.07
CCM2-201ENST00000258781 TRBV20OR9-2A0A075B6H5 130 aa21.7■■□□□ 1.06
CCM2-201ENST00000258781 GNG7O60262 68 aa21.7■■□□□ 1.06
CCM2-201ENST00000258781 MRPL27Q9P0M9 148 aaKnown RBP21.7■■□□□ 1.06
CCM2-201ENST00000258781 LY96Q9Y6Y9 160 aa21.7■■□□□ 1.06
CCM2-201ENST00000258781 NDUFB8O95169 186 aa21.69■■□□□ 1.06
CCM2-201ENST00000258781 CD99P14209 185 aa21.69■■□□□ 1.06
CCM2-201ENST00000258781 SSX3Q99909 188 aa21.69■■□□□ 1.06
CCM2-201ENST00000258781 TMUB1Q9BVT8 246 aa21.69■■□□□ 1.06
CCM2-201ENST00000258781 C1orf196B1AJZ1 125 aa21.69■■□□□ 1.06
CCM2-201ENST00000258781 SUMO1P63165 101 aaKnown RBP21.69■■□□□ 1.06
CCM2-201ENST00000258781 URGCP-MRPS24S4R325 110 aa21.69■■□□□ 1.06
CCM2-201ENST00000258781 H7BYZ3 331 aa21.68■■□□□ 1.06
CCM2-201ENST00000258781 OR2J3O76001 311 aa21.68■■□□□ 1.06
CCM2-201ENST00000258781 CRYBB3P26998 211 aa21.68■■□□□ 1.06
CCM2-201ENST00000258781 FCGR2BP31994 310 aaPredicted RBP21.68■■□□□ 1.06
CCM2-201ENST00000258781 RPL35P42766 123 aaKnown RBP21.68■■□□□ 1.06
CCM2-201ENST00000258781 ECSCRQ19T08 205 aa21.68■■□□□ 1.06
CCM2-201ENST00000258781 TMEM219Q86XT9 240 aa21.68■■□□□ 1.06
CCM2-201ENST00000258781 VN1R17PQ8TDU5 208 aa21.68■■□□□ 1.06
CCM2-201ENST00000258781 TXN2Q99757 166 aa21.68■■□□□ 1.06
CCM2-201ENST00000258781 F8W735 103 aaPredicted RBP21.67■■□□□ 1.06
CCM2-201ENST00000258781 J3QLI3 93 aa21.67■■□□□ 1.06
CCM2-201ENST00000258781 GP9P14770 177 aa21.67■■□□□ 1.06
CCM2-201ENST00000258781 RAB5BP61020 215 aa21.67■■□□□ 1.06
CCM2-201ENST00000258781 C2CD4CQ8TF44 421 aa21.67■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 142.9 ms