RNA–Protein interactions for RNA: ENST00000228916.6

SCNN1A-201, Transcript of sodium channel epithelial 1 alpha subunit, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SCNN1A, Length 3,135 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCNN1A-201ENST00000228916 RNF24Q9Y225 148 aa11.27□□□□□ -0.61
SCNN1A-201ENST00000228916 LOC102724200A0A096LPH7 203 aaPredicted RBP11.26□□□□□ -0.61
SCNN1A-201ENST00000228916 AMMECR1LQ6DCA0 310 aa11.26□□□□□ -0.61
SCNN1A-201ENST00000228916 RND1Q92730 232 aa11.26□□□□□ -0.61
SCNN1A-201ENST00000228916 PGLYRP4Q96LB8 373 aa11.26□□□□□ -0.61
SCNN1A-201ENST00000228916 HARBI1Q96MB7 349 aa11.26□□□□□ -0.61
SCNN1A-201ENST00000228916 MAP1LC3CQ9BXW4 147 aa11.26□□□□□ -0.61
SCNN1A-201ENST00000228916 PLSCR4Q9NRQ2 329 aa11.26□□□□□ -0.61
SCNN1A-201ENST00000228916 DYSFO75923 2080 aa11.26□□□□□ -0.61
SCNN1A-201ENST00000228916 PGPA6NDG6 321 aa11.26□□□□□ -0.61
SCNN1A-201ENST00000228916 CGB1A6NKQ9 187 aa11.26□□□□□ -0.61
SCNN1A-201ENST00000228916 LTAP01374 205 aa11.26□□□□□ -0.61
SCNN1A-201ENST00000228916 SP9P0CG40 484 aa11.26□□□□□ -0.61
SCNN1A-201ENST00000228916 HIST1H1AQ02539 215 aaPredicted RBP11.26□□□□□ -0.61
SCNN1A-201ENST00000228916 WT1-ASQ06250 92 aa11.26□□□□□ -0.61
SCNN1A-201ENST00000228916 RBPMS2Q6ZRY4 209 aaKnown RBP11.26□□□□□ -0.61
SCNN1A-201ENST00000228916 H1FXQ92522 213 aaKnown RBP11.26□□□□□ -0.61
SCNN1A-201ENST00000228916 GAFA1Q96PS6 74 aa11.26□□□□□ -0.61
SCNN1A-201ENST00000228916 MRPL36Q9P0J6 103 aaKnown RBP11.26□□□□□ -0.61
SCNN1A-201ENST00000228916 TM4SF5O14894 197 aa11.26□□□□□ -0.61
SCNN1A-201ENST00000228916 PLAUP00749 431 aa11.26□□□□□ -0.61
SCNN1A-201ENST00000228916 P01737 135 aa11.26□□□□□ -0.61
SCNN1A-201ENST00000228916 ZNF71Q9NQZ8 489 aaPredicted RBP11.26□□□□□ -0.61
SCNN1A-201ENST00000228916 SLC25A15Q9Y619 301 aa11.26□□□□□ -0.61
SCNN1A-201ENST00000228916 FAM231BA6NCW3 169 aa11.25□□□□□ -0.61
SCNN1A-201ENST00000228916 CDX4O14627 284 aaPredicted RBP11.25□□□□□ -0.61
SCNN1A-201ENST00000228916 SPRY3O43610 288 aa11.25□□□□□ -0.61
SCNN1A-201ENST00000228916 GATA4P43694 442 aa11.25□□□□□ -0.61
SCNN1A-201ENST00000228916 PSG9Q00887 426 aa11.25□□□□□ -0.61
SCNN1A-201ENST00000228916 HES3Q5TGS1 186 aa11.25□□□□□ -0.61
SCNN1A-201ENST00000228916 FMC1Q96HJ9 113 aa11.25□□□□□ -0.61
SCNN1A-201ENST00000228916 VPS25Q9BRG1 176 aa11.25□□□□□ -0.61
SCNN1A-201ENST00000228916 MRPL20Q9BYC9 149 aaKnown RBP11.25□□□□□ -0.61
SCNN1A-201ENST00000228916 CBY3A6NI87 242 aa11.25□□□□□ -0.61
SCNN1A-201ENST00000228916 TMEM177Q53S58 311 aa11.25□□□□□ -0.61
SCNN1A-201ENST00000228916 SMIM15Q7Z3B0 74 aa11.25□□□□□ -0.61
SCNN1A-201ENST00000228916 NPIPB6E9PJ23 425 aa11.24□□□□□ -0.61
SCNN1A-201ENST00000228916 APOA2P02652 100 aa11.24□□□□□ -0.61
SCNN1A-201ENST00000228916 LINC01545Q5VT33 79 aa11.24□□□□□ -0.61
SCNN1A-201ENST00000228916 RBMXL3Q8N7X1 1067 aaKnown RBP11.24□□□□□ -0.61
SCNN1A-201ENST00000228916 TMEM167AQ8TBQ9 72 aa11.24□□□□□ -0.61
SCNN1A-201ENST00000228916 BLNKQ8WV28 456 aa11.24□□□□□ -0.61
SCNN1A-201ENST00000228916 PERPQ96FX8 193 aa11.24□□□□□ -0.61
SCNN1A-201ENST00000228916 NAV3Q8IVL0 2385 aa11.24□□□□□ -0.61
SCNN1A-201ENST00000228916 IGHV3-48P01763 117 aa11.24□□□□□ -0.61
SCNN1A-201ENST00000228916 FAM71F2Q6NXP2 309 aa11.24□□□□□ -0.61
SCNN1A-201ENST00000228916 BHLHA15Q7RTS1 189 aaPredicted RBP11.24□□□□□ -0.61
SCNN1A-201ENST00000228916 ZCCHC24Q8N2G6 241 aaKnown RBP11.24□□□□□ -0.61
SCNN1A-201ENST00000228916 C5orf17Q8NAS9 161 aa11.24□□□□□ -0.61
SCNN1A-201ENST00000228916 OR5AN1Q8NGI8 311 aa11.24□□□□□ -0.61
SCNN1A-201ENST00000228916 RNF7Q9UBF6 113 aa11.24□□□□□ -0.61
SCNN1A-201ENST00000228916 HSPB8Q9UJY1 196 aa11.24□□□□□ -0.61
SCNN1A-201ENST00000228916 A0A087X0K7 114 aa11.24□□□□□ -0.61
SCNN1A-201ENST00000228916 PRR33A8MZF0 331 aa11.24□□□□□ -0.61
SCNN1A-201ENST00000228916 APOHP02749 345 aaPredicted RBP11.24□□□□□ -0.61
SCNN1A-201ENST00000228916 NBEAP1P0C6P0 100 aa11.24□□□□□ -0.61
SCNN1A-201ENST00000228916 ZNF137PP52743 207 aa11.24□□□□□ -0.61
SCNN1A-201ENST00000228916 SRSF6Q13247 344 aaKnown RBP11.24□□□□□ -0.61
SCNN1A-201ENST00000228916 RAI1Q7Z5J4 1906 aaPredicted RBP11.24□□□□□ -0.61
SCNN1A-201ENST00000228916 ICE1Q9Y2F5 2266 aa11.24□□□□□ -0.61
SCNN1A-201ENST00000228916 SVILO95425 2214 aa11.23□□□□□ -0.61
SCNN1A-201ENST00000228916 TRAV8-6A0A0B4J262 113 aa11.23□□□□□ -0.61
SCNN1A-201ENST00000228916 SUB1P53999 127 aaKnown RBP eCLIP11.23□□□□□ -0.61
SCNN1A-201ENST00000228916 ZNF788Q6ZQV5 615 aa11.23□□□□□ -0.61
SCNN1A-201ENST00000228916 OR4A5Q8NH83 315 aa11.23□□□□□ -0.61
SCNN1A-201ENST00000228916 CCL13Q99616 98 aa11.23□□□□□ -0.61
SCNN1A-201ENST00000228916 C10orf55Q5SWW7 151 aa11.23□□□□□ -0.61
SCNN1A-201ENST00000228916 FAM216BQ8N7L0 139 aa11.23□□□□□ -0.61
SCNN1A-201ENST00000228916 FDCSPQ8NFU4 85 aa11.23□□□□□ -0.61
SCNN1A-201ENST00000228916 MCRIP2Q9BUT9 160 aaKnown RBP11.23□□□□□ -0.61
SCNN1A-201ENST00000228916 PEF1Q9UBV8 284 aaKnown RBP11.23□□□□□ -0.61
SCNN1A-201ENST00000228916 RPH3ALQ9UNE2 315 aa11.23□□□□□ -0.61
SCNN1A-201ENST00000228916 OVOL3O00110 214 aa11.22□□□□□ -0.61
SCNN1A-201ENST00000228916 HAX1O00165 279 aa11.22□□□□□ -0.61
SCNN1A-201ENST00000228916 CHEK1O14757 476 aa11.22□□□□□ -0.61
SCNN1A-201ENST00000228916 TCRAP04437 139 aa11.22□□□□□ -0.61
SCNN1A-201ENST00000228916 COX8AP10176 69 aa11.22□□□□□ -0.61
SCNN1A-201ENST00000228916 GPR183P32249 361 aa11.22□□□□□ -0.61
SCNN1A-201ENST00000228916 CCL11P51671 97 aa11.22□□□□□ -0.61
SCNN1A-201ENST00000228916 ZNF138P52744 262 aa11.22□□□□□ -0.61
SCNN1A-201ENST00000228916 C2orf91Q6ZV80 131 aa11.22□□□□□ -0.61
SCNN1A-201ENST00000228916 NEU4Q8WWR8 484 aaPredicted RBP11.22□□□□□ -0.61
SCNN1A-201ENST00000228916 IGLV3-9A0A075B6K5 115 aa11.22□□□□□ -0.61
SCNN1A-201ENST00000228916 GAGE12BA1L429 117 aa11.22□□□□□ -0.61
SCNN1A-201ENST00000228916 C22orf46C9J442 243 aa11.22□□□□□ -0.61
SCNN1A-201ENST00000228916 GLRXP35754 106 aa11.22□□□□□ -0.61
SCNN1A-201ENST00000228916 DEFB108BQ8NET1 73 aa11.22□□□□□ -0.61
SCNN1A-201ENST00000228916 FLYWCH2Q96CP2 140 aaKnown RBP11.22□□□□□ -0.61
SCNN1A-201ENST00000228916 NKX2-8O15522 239 aa11.22□□□□□ -0.61
SCNN1A-201ENST00000228916 GP9P14770 177 aa11.22□□□□□ -0.61
SCNN1A-201ENST00000228916 ORM2P19652 201 aa11.22□□□□□ -0.61
SCNN1A-201ENST00000228916 DAZAP1Q96EP5 407 aaKnown RBP11.22□□□□□ -0.61
SCNN1A-201ENST00000228916 GUCD1Q96NT3 240 aa11.22□□□□□ -0.61
SCNN1A-201ENST00000228916 TMUB1Q9BVT8 246 aa11.22□□□□□ -0.61
SCNN1A-201ENST00000228916 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP11.21□□□□□ -0.61
SCNN1A-201ENST00000228916 VHLLQ6RSH7 139 aa11.21□□□□□ -0.61
SCNN1A-201ENST00000228916 C16orf54Q6UWD8 224 aa11.21□□□□□ -0.61
SCNN1A-201ENST00000228916 OR1B1Q8NGR6 318 aa11.21□□□□□ -0.61
SCNN1A-201ENST00000228916 VSTM2AQ8TAG5 236 aa11.21□□□□□ -0.61
SCNN1A-201ENST00000228916 PMCHL2Q9BQD1 86 aa11.21□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms