RNA–Protein interactions for RNA: ENST00000220959.8

UBR5-201, Transcript of ubiquitin protein ligase E3 component n-recognin 5, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene UBR5, Length 9,418 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR5-201ENST00000220959 TMEM155Q4W5P6 130 aa12.34□□□□□ -0.43
UBR5-201ENST00000220959 IFI27L1Q96BM0 104 aa12.34□□□□□ -0.43
UBR5-201ENST00000220959 ZNF48Q96MX3 618 aaPredicted RBP12.34□□□□□ -0.43
UBR5-201ENST00000220959 TRBV6-7A0A0A0MS04 114 aa12.34□□□□□ -0.43
UBR5-201ENST00000220959 IGHV3-53P01767 116 aa12.34□□□□□ -0.43
UBR5-201ENST00000220959 ATP5L2Q7Z4Y8 100 aa12.34□□□□□ -0.43
UBR5-201ENST00000220959 VMO1Q7Z5L0 202 aa12.34□□□□□ -0.43
UBR5-201ENST00000220959 TMEM219Q86XT9 240 aa12.34□□□□□ -0.43
UBR5-201ENST00000220959 IGHV1-18A0A0C4DH31 117 aa12.34□□□□□ -0.43
UBR5-201ENST00000220959 RAMP3O60896 148 aa12.34□□□□□ -0.43
UBR5-201ENST00000220959 FXYD7P58549 80 aa12.34□□□□□ -0.43
UBR5-201ENST00000220959 TMEM249Q2WGJ8 235 aa12.34□□□□□ -0.43
UBR5-201ENST00000220959 ZNF837Q96EG3 531 aaPredicted RBP12.33□□□□□ -0.43
UBR5-201ENST00000220959 LAMTOR2Q9Y2Q5 125 aa12.33□□□□□ -0.43
UBR5-201ENST00000220959 RASL10AQ92737 203 aa12.33□□□□□ -0.44
UBR5-201ENST00000220959 CHCHD1Q96BP2 118 aaKnown RBP12.33□□□□□ -0.44
UBR5-201ENST00000220959 ITGB1BP1O14713 200 aa12.33□□□□□ -0.44
UBR5-201ENST00000220959 C18orf12Q96KH6 178 aa12.33□□□□□ -0.44
UBR5-201ENST00000220959 SIGMAR1Q99720 223 aa12.33□□□□□ -0.44
UBR5-201ENST00000220959 ANAPC10Q9UM13 185 aa12.33□□□□□ -0.44
UBR5-201ENST00000220959 COX11Q9Y6N1 276 aa12.33□□□□□ -0.44
UBR5-201ENST00000220959 A0A1W2PRE2 83 aa12.33□□□□□ -0.44
UBR5-201ENST00000220959 VWC2LB2RUY7 222 aa12.33□□□□□ -0.44
UBR5-201ENST00000220959 LINC00271P0C7V0 271 aa12.33□□□□□ -0.44
UBR5-201ENST00000220959 ERCC8Q13216 396 aa12.33□□□□□ -0.44
UBR5-201ENST00000220959 ORAOV1Q8WV07 137 aa12.33□□□□□ -0.44
UBR5-201ENST00000220959 WBP1Q96G27 269 aa12.33□□□□□ -0.44
UBR5-201ENST00000220959 PRCDQ00LT1 54 aa12.33□□□□□ -0.44
UBR5-201ENST00000220959 MBNL3Q9NUK0 354 aaKnown RBP12.33□□□□□ -0.44
UBR5-201ENST00000220959 ERVH48-1M5A8F1 160 aa12.33□□□□□ -0.44
UBR5-201ENST00000220959 SPACA3Q8IXA5 215 aa12.33□□□□□ -0.44
UBR5-201ENST00000220959 ZNF672Q499Z4 452 aaPredicted RBP12.32□□□□□ -0.44
UBR5-201ENST00000220959 C1QTNF4Q9BXJ3 329 aa12.32□□□□□ -0.44
UBR5-201ENST00000220959 ACTL10Q5JWF8 245 aa12.32□□□□□ -0.44
UBR5-201ENST00000220959 CRIM1Q9NZV1 1036 aa12.32□□□□□ -0.44
UBR5-201ENST00000220959 IGKV2-40A0A087WW87 121 aaPredicted RBP12.32□□□□□ -0.44
UBR5-201ENST00000220959 IGKV2D-40P01614 121 aaPredicted RBP12.32□□□□□ -0.44
UBR5-201ENST00000220959 FOXL1Q12952 345 aa12.32□□□□□ -0.44
UBR5-201ENST00000220959 MAJINQ3KP22 176 aa12.32□□□□□ -0.44
UBR5-201ENST00000220959 TEX43Q6ZNM6 134 aa12.32□□□□□ -0.44
UBR5-201ENST00000220959 PTPRFP10586 1907 aa12.32□□□□□ -0.44
UBR5-201ENST00000220959 DNAJC30Q96LL9 226 aa12.32□□□□□ -0.44
UBR5-201ENST00000220959 SDK2Q58EX2 2172 aa12.32□□□□□ -0.44
UBR5-201ENST00000220959 PLXNB1O43157 2135 aa12.31□□□□□ -0.44
UBR5-201ENST00000220959 TRAV16A0A0A6YYK6 109 aaPredicted RBP12.31□□□□□ -0.44
UBR5-201ENST00000220959 CSRP1P21291 193 aaKnown RBP12.31□□□□□ -0.44
UBR5-201ENST00000220959 EFNB3Q15768 340 aa12.31□□□□□ -0.44
UBR5-201ENST00000220959 GNB1LQ9BYB4 327 aa12.31□□□□□ -0.44
UBR5-201ENST00000220959 GAGE2EQ4V326 116 aa12.31□□□□□ -0.44
UBR5-201ENST00000220959 GAGE2DQ9UEU5 116 aa12.31□□□□□ -0.44
UBR5-201ENST00000220959 SS18Q15532 418 aa12.31□□□□□ -0.44
UBR5-201ENST00000220959 C15orf32Q32M92 178 aa12.31□□□□□ -0.44
UBR5-201ENST00000220959 PLEKHB2Q96CS7 222 aa12.31□□□□□ -0.44
UBR5-201ENST00000220959 SPRR3Q9UBC9 169 aa12.31□□□□□ -0.44
UBR5-201ENST00000220959 TRBV7-1A0A0A6YYK4 115 aa12.31□□□□□ -0.44
UBR5-201ENST00000220959 C1QTNF9P0C862 333 aa12.31□□□□□ -0.44
UBR5-201ENST00000220959 ZXDCQ2QGD7 858 aaPredicted RBP12.31□□□□□ -0.44
UBR5-201ENST00000220959 LCNL1Q6ZST4 164 aa12.31□□□□□ -0.44
UBR5-201ENST00000220959 KLHL30-AS1Q8NEE0 82 aa12.31□□□□□ -0.44
UBR5-201ENST00000220959 SEC11AP67812 179 aa12.31□□□□□ -0.44
UBR5-201ENST00000220959 GZMBP10144 247 aa12.31□□□□□ -0.44
UBR5-201ENST00000220959 CARHSP1Q9Y2V2 147 aaKnown RBP12.31□□□□□ -0.44
UBR5-201ENST00000220959 HOXD3P31249 432 aaPredicted RBP12.31□□□□□ -0.44
UBR5-201ENST00000220959 GREM1O60565 184 aa12.3□□□□□ -0.44
UBR5-201ENST00000220959 EFNA4P52798 201 aa12.3□□□□□ -0.44
UBR5-201ENST00000220959 OR10W1Q8NGF6 305 aa12.3□□□□□ -0.44
UBR5-201ENST00000220959 TMEM170AQ8WVE7 144 aa12.3□□□□□ -0.44
UBR5-201ENST00000220959 UBE2E2Q96LR5 201 aa12.3□□□□□ -0.44
UBR5-201ENST00000220959 DEPPQ9NTK1 212 aa12.3□□□□□ -0.44
UBR5-201ENST00000220959 PMS2P5A8MQ11 134 aa12.3□□□□□ -0.44
UBR5-201ENST00000220959 TFF1P04155 84 aa12.3□□□□□ -0.44
UBR5-201ENST00000220959 RPL15P61313 204 aaKnown RBP12.3□□□□□ -0.44
UBR5-201ENST00000220959 IGHV1-46P01743 117 aa12.3□□□□□ -0.44
UBR5-201ENST00000220959 NCOR1P1Q9H4R4 102 aa12.3□□□□□ -0.44
UBR5-201ENST00000220959 IGHV2-26A0A0B4J1V2 119 aa12.3□□□□□ -0.44
UBR5-201ENST00000220959 LINC01559Q495D7 138 aa12.3□□□□□ -0.44
UBR5-201ENST00000220959 MINOS1Q5TGZ0 78 aa12.3□□□□□ -0.44
UBR5-201ENST00000220959 MINOS1-NBL1R4GNA1 71 aa12.3□□□□□ -0.44
UBR5-201ENST00000220959 MLNRO43193 412 aa12.3□□□□□ -0.44
UBR5-201ENST00000220959 SPSB3Q6PJ21 355 aa12.3□□□□□ -0.44
UBR5-201ENST00000220959 COL18A1P39060 1754 aa12.3□□□□□ -0.44
UBR5-201ENST00000220959 C20orf204Q6ZNR8 217 aa12.29□□□□□ -0.44
UBR5-201ENST00000220959 TRAV9-2A0A087WT02 112 aa12.29□□□□□ -0.44
UBR5-201ENST00000220959 B4DSR2 109 aa12.29□□□□□ -0.44
UBR5-201ENST00000220959 GAGE13Q4V321 117 aa12.29□□□□□ -0.44
UBR5-201ENST00000220959 ZNF474Q6S9Z5 364 aaPredicted RBP12.29□□□□□ -0.44
UBR5-201ENST00000220959 PIP4P2Q8N4L2 257 aa12.29□□□□□ -0.44
UBR5-201ENST00000220959 KLF12Q9Y4X4 402 aa12.29□□□□□ -0.44
UBR5-201ENST00000220959 SAMD5Q5TGI4 173 aa12.29□□□□□ -0.44
UBR5-201ENST00000220959 RNF166Q96A37 237 aaPredicted RBP12.29□□□□□ -0.44
UBR5-201ENST00000220959 ZNF236Q9UL36 1845 aa12.29□□□□□ -0.44
UBR5-201ENST00000220959 OCC1Q8TAD7 63 aa12.29□□□□□ -0.44
UBR5-201ENST00000220959 ZNF479Q96JC4 524 aa12.29□□□□□ -0.44
UBR5-201ENST00000220959 MED12LQ86YW9 2145 aa12.29□□□□□ -0.44
UBR5-201ENST00000220959 DUTP33316 252 aaKnown RBP12.29□□□□□ -0.44
UBR5-201ENST00000220959 TMEM105Q8N8V8 129 aa12.29□□□□□ -0.44
UBR5-201ENST00000220959 OVOL2Q9BRP0 275 aa12.29□□□□□ -0.44
UBR5-201ENST00000220959 RNF114Q9Y508 228 aa12.29□□□□□ -0.44
UBR5-201ENST00000220959 SRRM4A7MD48 611 aaKnown RBP12.29□□□□□ -0.44
UBR5-201ENST00000220959 RBBP6Q7Z6E9 1792 aaKnown RBP12.29□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 79 ms