RNA–Protein interactions for RNA: ENSMUST00000139560.7

Ndc1-204, Transcript of Nucleoporin NDC1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ndc1, Length 4,584 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ndc1-204ENSMUST00000139560 Gm3512L7N206 146 aa10.12□□□□□ -0.79
Ndc1-204ENSMUST00000139560 Gm20939L7N243 523 aa10.12□□□□□ -0.79
Ndc1-204ENSMUST00000139560 Phxr2P15972 65 aa10.12□□□□□ -0.79
Ndc1-204ENSMUST00000139560 Cd3eP22646 189 aa10.12□□□□□ -0.79
Ndc1-204ENSMUST00000139560 Otx1P80205 355 aa10.12□□□□□ -0.79
Ndc1-204ENSMUST00000139560 Prss57Q14B24 284 aa10.12□□□□□ -0.79
Ndc1-204ENSMUST00000139560 Cks1brtQ3UNC9 96 aa10.12□□□□□ -0.79
Ndc1-204ENSMUST00000139560 Vstm2lQ6PDS0 220 aa10.12□□□□□ -0.79
Ndc1-204ENSMUST00000139560 Mrps18cQ8R2L5 143 aaKnown RBP10.12□□□□□ -0.79
Ndc1-204ENSMUST00000139560 Olfr916Q8VG53 310 aa10.12□□□□□ -0.79
Ndc1-204ENSMUST00000139560 Gpx2Q9JHC0 190 aa10.12□□□□□ -0.79
Ndc1-204ENSMUST00000139560 FancmQ8BGE5 2021 aa10.12□□□□□ -0.79
Ndc1-204ENSMUST00000139560 Mettl23A2AA28 253 aa10.12□□□□□ -0.79
Ndc1-204ENSMUST00000139560 Gm20830J3KML6 227 aa10.12□□□□□ -0.79
Ndc1-204ENSMUST00000139560 Gm21746J3QMM6 180 aa10.12□□□□□ -0.79
Ndc1-204ENSMUST00000139560 MidnQ3TPJ7 465 aa10.12□□□□□ -0.79
Ndc1-204ENSMUST00000139560 Rbpms2Q8VC52 206 aaKnown RBP10.12□□□□□ -0.79
Ndc1-204ENSMUST00000139560 Olfr303Q8VFP0 319 aa10.12□□□□□ -0.79
Ndc1-204ENSMUST00000139560 Neurl1Q923S6 574 aa10.12□□□□□ -0.79
Ndc1-204ENSMUST00000139560 Shisal2bQ9D1Y9 158 aa10.12□□□□□ -0.79
Ndc1-204ENSMUST00000139560 Syt13Q9EQT6 426 aa10.12□□□□□ -0.79
Ndc1-204ENSMUST00000139560 OtofQ9ESF1 1997 aa10.12□□□□□ -0.79
Ndc1-204ENSMUST00000139560 Gm45800A0A1B0GT24 152 aa10.12□□□□□ -0.79
Ndc1-204ENSMUST00000139560 Esp38A8R0X1 80 aa10.12□□□□□ -0.79
Ndc1-204ENSMUST00000139560 Gm4791J3QQ14 102 aa10.12□□□□□ -0.79
Ndc1-204ENSMUST00000139560 Olfr898L7N1Z5 316 aa10.12□□□□□ -0.79
Ndc1-204ENSMUST00000139560 Vmn1r128L7N2B4 307 aa10.12□□□□□ -0.79
Ndc1-204ENSMUST00000139560 Gtf2h5Q8K2X8 71 aa10.12□□□□□ -0.79
Ndc1-204ENSMUST00000139560 Rpp21Q8R040 150 aa10.12□□□□□ -0.79
Ndc1-204ENSMUST00000139560 Olfr1462Q8VFW3 307 aa10.12□□□□□ -0.79
Ndc1-204ENSMUST00000139560 Olfr1038Q8VGS1 319 aa10.12□□□□□ -0.79
Ndc1-204ENSMUST00000139560 Acp1Q9D358 158 aa10.12□□□□□ -0.79
Ndc1-204ENSMUST00000139560 4933402D24RikQ9D4D3 167 aa10.12□□□□□ -0.79
Ndc1-204ENSMUST00000139560 Sh2d2aQ9QXK9 374 aa10.12□□□□□ -0.79
Ndc1-204ENSMUST00000139560 Pus1Q9WU56 423 aa10.12□□□□□ -0.79
Ndc1-204ENSMUST00000139560 Arid1bE9Q4N7 2244 aa10.11□□□□□ -0.79
Ndc1-204ENSMUST00000139560 Ighv9-1A0A0B4J1P3 117 aa10.11□□□□□ -0.79
Ndc1-204ENSMUST00000139560 Olfr905L7N1X5 310 aa10.11□□□□□ -0.79
Ndc1-204ENSMUST00000139560 Fam57aQ5ND56 257 aa10.11□□□□□ -0.79
Ndc1-204ENSMUST00000139560 Tox3Q80W03 575 aa10.11□□□□□ -0.79
Ndc1-204ENSMUST00000139560 Il25Q8VHH8 169 aa10.11□□□□□ -0.79
Ndc1-204ENSMUST00000139560 Pxmp4Q9JJW0 212 aa10.11□□□□□ -0.79
Ndc1-204ENSMUST00000139560 Zfp111Q9R164 701 aa10.11□□□□□ -0.79
Ndc1-204ENSMUST00000139560 PkdrejQ9Z0T6 2126 aa10.11□□□□□ -0.79
Ndc1-204ENSMUST00000139560 Sdk1Q3UH53 2193 aa10.11□□□□□ -0.79
Ndc1-204ENSMUST00000139560 Trbv26A0A0B4J1P5 115 aa10.11□□□□□ -0.79
Ndc1-204ENSMUST00000139560 Timp1P12032 205 aa10.11□□□□□ -0.79
Ndc1-204ENSMUST00000139560 Hoxd11P23813 323 aa10.11□□□□□ -0.79
Ndc1-204ENSMUST00000139560 Vax1Q2NKI2 338 aa10.11□□□□□ -0.79
Ndc1-204ENSMUST00000139560 Slc25a28Q8R0Z5 364 aa10.11□□□□□ -0.79
Ndc1-204ENSMUST00000139560 Sfxn4Q925N1 313 aa10.11□□□□□ -0.79
Ndc1-204ENSMUST00000139560 Fdx2Q9CPW2 174 aa10.11□□□□□ -0.79
Ndc1-204ENSMUST00000139560 Lysmd2Q9D7V2 215 aa10.11□□□□□ -0.79
Ndc1-204ENSMUST00000139560 Tspan32Q9JHH2 256 aa10.11□□□□□ -0.79
Ndc1-204ENSMUST00000139560 Adam11Q9R1V4 773 aa10.11□□□□□ -0.79
Ndc1-204ENSMUST00000139560 Vmn1r224E9PWK2 298 aa10.11□□□□□ -0.79
Ndc1-204ENSMUST00000139560 RhobP62746 196 aa10.11□□□□□ -0.79
Ndc1-204ENSMUST00000139560 HrasQ61411 189 aa10.11□□□□□ -0.79
Ndc1-204ENSMUST00000139560 Btf3Q64152 204 aaKnown RBP10.11□□□□□ -0.79
Ndc1-204ENSMUST00000139560 AdtrpQ8C138 230 aa10.11□□□□□ -0.79
Ndc1-204ENSMUST00000139560 Olfr1030Q8VFL5 318 aa10.11□□□□□ -0.79
Ndc1-204ENSMUST00000139560 Npc2Q9Z0J0 149 aa10.11□□□□□ -0.79
Ndc1-204ENSMUST00000139560 Dicer1Q8R418 1916 aa10.11□□□□□ -0.79
Ndc1-204ENSMUST00000139560 Trav15-2-dv6-2A0A075B650 123 aa10.11□□□□□ -0.79
Ndc1-204ENSMUST00000139560 D830044I16RikA0A1D5RM53 117 aa10.11□□□□□ -0.79
Ndc1-204ENSMUST00000139560 Gm8677K9J7G9 307 aa10.11□□□□□ -0.79
Ndc1-204ENSMUST00000139560 ElnP54320 860 aa10.11□□□□□ -0.79
Ndc1-204ENSMUST00000139560 Gpr183Q3U6B2 357 aa10.11□□□□□ -0.79
Ndc1-204ENSMUST00000139560 Taar5Q5QD14 337 aa10.11□□□□□ -0.79
Ndc1-204ENSMUST00000139560 Ctnnbip1Q9JJN6 81 aa10.11□□□□□ -0.79
Ndc1-204ENSMUST00000139560 Brwd1Q921C3 2304 aa10.11□□□□□ -0.79
Ndc1-204ENSMUST00000139560 Gm45753A0A1C7CYU8 86 aa10.1□□□□□ -0.79
Ndc1-204ENSMUST00000139560 Olfr1274-psA0A1L1SQ02 309 aa10.1□□□□□ -0.79
Ndc1-204ENSMUST00000139560 Gm4787B2RUD9 748 aa10.1□□□□□ -0.79
Ndc1-204ENSMUST00000139560 Mbd3l2Q3UXB0 228 aa10.1□□□□□ -0.79
Ndc1-204ENSMUST00000139560 A3galt2Q3V1N9 370 aa10.1□□□□□ -0.79
Ndc1-204ENSMUST00000139560 Olfr1535Q7TQU0 326 aa10.1□□□□□ -0.79
Ndc1-204ENSMUST00000139560 Rnf2Q9CQJ4 336 aa10.1□□□□□ -0.79
Ndc1-204ENSMUST00000139560 Pde6dO55057 150 aa10.1□□□□□ -0.79
Ndc1-204ENSMUST00000139560 Adipor1Q91VH1 375 aa10.1□□□□□ -0.79
Ndc1-204ENSMUST00000139560 9130008F23RikQ9D2Z6 181 aa10.1□□□□□ -0.79
Ndc1-204ENSMUST00000139560 Mdp1Q9D967 164 aa10.1□□□□□ -0.79
Ndc1-204ENSMUST00000139560 Vmn1r54Q9EPB8 315 aa10.1□□□□□ -0.79
Ndc1-204ENSMUST00000139560 Pet117P0DJF2 80 aa10.1□□□□□ -0.79
Ndc1-204ENSMUST00000139560 Olfr1028Q7TR89 324 aa10.1□□□□□ -0.79
Ndc1-204ENSMUST00000139560 Henmt1Q8CAE2 395 aa10.1□□□□□ -0.79
Ndc1-204ENSMUST00000139560 Fbxo25Q9D2Y6 357 aa10.1□□□□□ -0.79
Ndc1-204ENSMUST00000139560 Gab2Q9Z1S8 665 aa10.1□□□□□ -0.79
Ndc1-204ENSMUST00000139560 NbasE9Q411 2356 aa10.1□□□□□ -0.79
Ndc1-204ENSMUST00000139560 PhipQ8VDD9 1821 aaKnown RBP10.1□□□□□ -0.79
Ndc1-204ENSMUST00000139560 Casp8ap2Q9WUF3 1962 aa10.09□□□□□ -0.79
Ndc1-204ENSMUST00000139560 Dcaf10A2AKB9 566 aa10.09□□□□□ -0.79
Ndc1-204ENSMUST00000139560 Psg20E9Q9B4 475 aa10.09□□□□□ -0.79
Ndc1-204ENSMUST00000139560 Zfp764E9QAP1 431 aa10.09□□□□□ -0.79
Ndc1-204ENSMUST00000139560 9130019O22RikG3X941 543 aa10.09□□□□□ -0.79
Ndc1-204ENSMUST00000139560 Tex30Q3TUU5 225 aa10.09□□□□□ -0.79
Ndc1-204ENSMUST00000139560 Vmn1r195Q5SVD6 316 aa10.09□□□□□ -0.79
Ndc1-204ENSMUST00000139560 Dnd1Q6VY05 352 aa10.09□□□□□ -0.79
Ndc1-204ENSMUST00000139560 Onecut2Q6XBJ3 505 aa10.09□□□□□ -0.79
Ndc1-204ENSMUST00000139560 Olfr1204Q7TR10 309 aa10.09□□□□□ -0.79
Retrieved 100 of 22,080 RNA–protein pairs in 31.6 ms