RNA–Protein interactions for RNA: ENSMUST00000118287.8

Prpf40b-202, Transcript of Pre-mRNA-processing factor 40 homolog B, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Prpf40b, Length 3,129 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf40b-202ENSMUST00000118287 Saa1P05366 122 aa9.2□□□□□ -0.94
Prpf40b-202ENSMUST00000118287 B4galt1P15535 399 aa9.2□□□□□ -0.94
Prpf40b-202ENSMUST00000118287 Hsf1P38532 525 aa9.2□□□□□ -0.94
Prpf40b-202ENSMUST00000118287 Apobec4Q497M3 374 aa9.2□□□□□ -0.94
Prpf40b-202ENSMUST00000118287 Olfr1000Q7TR99 314 aa9.2□□□□□ -0.94
Prpf40b-202ENSMUST00000118287 Olfr782Q7TRI2 314 aa9.2□□□□□ -0.94
Prpf40b-202ENSMUST00000118287 Tmem251Q8BH26 163 aa9.2□□□□□ -0.94
Prpf40b-202ENSMUST00000118287 Tmem56Q8CGF5 276 aa9.2□□□□□ -0.94
Prpf40b-202ENSMUST00000118287 Scgb1b27Q91WB5 92 aa9.2□□□□□ -0.94
Prpf40b-202ENSMUST00000118287 Syt7Q9R0N7 403 aa9.2□□□□□ -0.94
Prpf40b-202ENSMUST00000118287 Tpsb2P21845 276 aa9.2□□□□□ -0.94
Prpf40b-202ENSMUST00000118287 Htr2bQ02152 479 aa9.2□□□□□ -0.94
Prpf40b-202ENSMUST00000118287 Hhipl1Q14DK5 791 aa9.2□□□□□ -0.94
Prpf40b-202ENSMUST00000118287 CiartQ3TQ03 375 aa9.2□□□□□ -0.94
Prpf40b-202ENSMUST00000118287 SordQ64442 357 aa9.2□□□□□ -0.94
Prpf40b-202ENSMUST00000118287 Dnd1Q6VY05 352 aa9.2□□□□□ -0.94
Prpf40b-202ENSMUST00000118287 Rtn4rl2Q7M6Z0 420 aa9.2□□□□□ -0.94
Prpf40b-202ENSMUST00000118287 SowahbQ8BZW2 760 aa9.2□□□□□ -0.94
Prpf40b-202ENSMUST00000118287 Olfr112Q8C0S2 320 aa9.2□□□□□ -0.94
Prpf40b-202ENSMUST00000118287 Gpr84Q8CIM5 396 aa9.2□□□□□ -0.94
Prpf40b-202ENSMUST00000118287 Q8VCE4 163 aa9.2□□□□□ -0.94
Prpf40b-202ENSMUST00000118287 Olfr1377Q8VGH1 307 aa9.2□□□□□ -0.94
Prpf40b-202ENSMUST00000118287 Lmo1Q924W9 156 aa9.2□□□□□ -0.94
Prpf40b-202ENSMUST00000118287 Tstd3Q9D0B5 157 aa9.2□□□□□ -0.94
Prpf40b-202ENSMUST00000118287 Tnfrsf23Q9ER63 176 aa9.2□□□□□ -0.94
Prpf40b-202ENSMUST00000118287 Ms4a4bQ9ES61 226 aa9.2□□□□□ -0.94
Prpf40b-202ENSMUST00000118287 NpffQ9WVA8 114 aa9.2□□□□□ -0.94
Prpf40b-202ENSMUST00000118287 Cldn14Q9Z0S3 239 aa9.2□□□□□ -0.94
Prpf40b-202ENSMUST00000118287 Scgb1b12A0A087WP21 93 aa9.2□□□□□ -0.94
Prpf40b-202ENSMUST00000118287 2610044O15Rik8A0A087WRJ1 410 aa9.2□□□□□ -0.94
Prpf40b-202ENSMUST00000118287 Gm42543A0A0G2JET4 117 aa9.2□□□□□ -0.94
Prpf40b-202ENSMUST00000118287 Sh2d1bO35324 132 aa9.2□□□□□ -0.94
Prpf40b-202ENSMUST00000118287 Arf6P62331 175 aa9.2□□□□□ -0.94
Prpf40b-202ENSMUST00000118287 St6galnac2P70277 373 aa9.2□□□□□ -0.94
Prpf40b-202ENSMUST00000118287 Gm6760Q0ZNK3 87 aa9.2□□□□□ -0.94
Prpf40b-202ENSMUST00000118287 PcolceQ61398 468 aa9.2□□□□□ -0.94
Prpf40b-202ENSMUST00000118287 Smco3Q8BQM7 225 aa9.2□□□□□ -0.94
Prpf40b-202ENSMUST00000118287 Q8CF25 301 aa9.2□□□□□ -0.94
Prpf40b-202ENSMUST00000118287 Olfr1420Q8VF55 309 aa9.2□□□□□ -0.94
Prpf40b-202ENSMUST00000118287 Cd5lQ9QWK4 352 aa9.2□□□□□ -0.94
Prpf40b-202ENSMUST00000118287 Eif3iQ9QZD9 325 aaKnown RBP9.2□□□□□ -0.94
Prpf40b-202ENSMUST00000118287 Tstd1E9PY03 133 aa9.19□□□□□ -0.94
Prpf40b-202ENSMUST00000118287 Gm21863J3KMP8 111 aa9.19□□□□□ -0.94
Prpf40b-202ENSMUST00000118287 Pitx3O35160 302 aa9.19□□□□□ -0.94
Prpf40b-202ENSMUST00000118287 Hist1h2bfP10853 126 aa9.19□□□□□ -0.94
Prpf40b-202ENSMUST00000118287 LepP41160 167 aa9.19□□□□□ -0.94
Prpf40b-202ENSMUST00000118287 Mcpt8P43430 247 aa9.19□□□□□ -0.94
Prpf40b-202ENSMUST00000118287 PjvkQ0ZLH2 352 aa9.19□□□□□ -0.94
Prpf40b-202ENSMUST00000118287 Gm10447Q3UQ92 135 aa9.19□□□□□ -0.94
Prpf40b-202ENSMUST00000118287 Olfr142Q60881 305 aa9.19□□□□□ -0.94
Prpf40b-202ENSMUST00000118287 Hist1h2bbQ64475 126 aa9.19□□□□□ -0.94
Prpf40b-202ENSMUST00000118287 Msl2Q69ZF8 577 aa9.19□□□□□ -0.94
Prpf40b-202ENSMUST00000118287 Olfr1371Q7TQT7 311 aa9.19□□□□□ -0.94
Prpf40b-202ENSMUST00000118287 BC049762Q8C601 163 aa9.19□□□□□ -0.94
Prpf40b-202ENSMUST00000118287 Hist1h2bkQ8CGP1 126 aaKnown RBP9.19□□□□□ -0.94
Prpf40b-202ENSMUST00000118287 Hist1h2bpQ8CGP2 126 aaKnown RBP9.19□□□□□ -0.94
Prpf40b-202ENSMUST00000118287 Olfr1444Q8VFX2 319 aa9.19□□□□□ -0.94
Prpf40b-202ENSMUST00000118287 Ear10Q923L6 156 aa9.19□□□□□ -0.94
Prpf40b-202ENSMUST00000118287 Washc3Q9CR27 194 aa9.19□□□□□ -0.94
Prpf40b-202ENSMUST00000118287 Mrpl13Q9D1P0 178 aaKnown RBP9.19□□□□□ -0.94
Prpf40b-202ENSMUST00000118287 Olfr945Q9EQB5 319 aa9.19□□□□□ -0.94
Prpf40b-202ENSMUST00000118287 Fzr1Q9R1K5 493 aa9.19□□□□□ -0.94
Prpf40b-202ENSMUST00000118287 Zfp407G3UVV3 2246 aa9.19□□□□□ -0.94
Prpf40b-202ENSMUST00000118287 Trav12-1A0N8R1 115 aa9.19□□□□□ -0.94
Prpf40b-202ENSMUST00000118287 Gm10638F6QEG2 257 aa9.19□□□□□ -0.94
Prpf40b-202ENSMUST00000118287 Gm10097J3KMK7 105 aa9.19□□□□□ -0.94
Prpf40b-202ENSMUST00000118287 Pdcd6P12815 191 aaKnown RBP9.19□□□□□ -0.94
Prpf40b-202ENSMUST00000118287 HhexP43120 271 aa9.19□□□□□ -0.94
Prpf40b-202ENSMUST00000118287 Cd59bP58019 129 aa9.19□□□□□ -0.94
Prpf40b-202ENSMUST00000118287 Pip5k1aP70182 546 aa9.19□□□□□ -0.94
Prpf40b-202ENSMUST00000118287 Olfr1442Q0VEV7 312 aa9.19□□□□□ -0.94
Prpf40b-202ENSMUST00000118287 Mettl4Q3U034 471 aa9.19□□□□□ -0.94
Prpf40b-202ENSMUST00000118287 Olfr328Q5NCD3 310 aa9.19□□□□□ -0.94
Prpf40b-202ENSMUST00000118287 Oas1bQ60856 376 aa9.19□□□□□ -0.94
Prpf40b-202ENSMUST00000118287 PnlipQ6P8U6 465 aa9.19□□□□□ -0.94
Prpf40b-202ENSMUST00000118287 SptssaQ8R207 71 aa9.19□□□□□ -0.94
Prpf40b-202ENSMUST00000118287 Olfr136Q8VG72 312 aa9.19□□□□□ -0.94
Prpf40b-202ENSMUST00000118287 Tmprss11dQ8VHK8 417 aa9.19□□□□□ -0.94
Prpf40b-202ENSMUST00000118287 Vkorc1Q9CRC0 161 aa9.19□□□□□ -0.94
Prpf40b-202ENSMUST00000118287 Wbp2nlQ9D529 359 aa9.19□□□□□ -0.94
Prpf40b-202ENSMUST00000118287 Lyzl6Q9DA11 148 aa9.19□□□□□ -0.94
Prpf40b-202ENSMUST00000118287 Q9DAA3 117 aa9.19□□□□□ -0.94
Prpf40b-202ENSMUST00000118287 Gm45753A0A1C7CYU8 86 aa9.18□□□□□ -0.94
Prpf40b-202ENSMUST00000118287 Vmn1r160E9Q346 307 aa9.18□□□□□ -0.94
Prpf40b-202ENSMUST00000118287 Vmn1r123L7N270 307 aa9.18□□□□□ -0.94
Prpf40b-202ENSMUST00000118287 Igh-3P01867 404 aa9.18□□□□□ -0.94
Prpf40b-202ENSMUST00000118287 Cxcl1P12850 96 aa9.18□□□□□ -0.94
Prpf40b-202ENSMUST00000118287 PpicP30412 212 aaKnown RBP9.18□□□□□ -0.94
Prpf40b-202ENSMUST00000118287 Hist1h3aP68433 136 aa9.18□□□□□ -0.94
Prpf40b-202ENSMUST00000118287 Opn5Q6VZZ7 377 aa9.18□□□□□ -0.94
Prpf40b-202ENSMUST00000118287 Gm5771Q792Y9 245 aa9.18□□□□□ -0.94
Prpf40b-202ENSMUST00000118287 BsxQ810B3 232 aa9.18□□□□□ -0.94
Prpf40b-202ENSMUST00000118287 Vmn1r4Q8R2D3 297 aa9.18□□□□□ -0.94
Prpf40b-202ENSMUST00000118287 Rbpms2Q8VC52 206 aaKnown RBP9.18□□□□□ -0.94
Prpf40b-202ENSMUST00000118287 Abhd14aQ922Q6 247 aa9.18□□□□□ -0.94
Prpf40b-202ENSMUST00000118287 Ube2v1Q9CZY3 147 aa9.18□□□□□ -0.94
Prpf40b-202ENSMUST00000118287 Apc2Q9Z1K7 2274 aa9.18□□□□□ -0.94
Prpf40b-202ENSMUST00000118287 2410004P03RikA0A087WQY2 205 aa9.18□□□□□ -0.94
Prpf40b-202ENSMUST00000118287 Olfr709-ps1A0A140T8J9 307 aa9.18□□□□□ -0.94
Prpf40b-202ENSMUST00000118287 A0A1Y7VIT9 351 aa9.18□□□□□ -0.94
Retrieved 100 of 22,080 RNA–protein pairs in 25.7 ms