RNA–Protein interactions for RNA: ENSMUST00000076265.12

Upf3b-201, Transcript of UPF3 regulator of nonsense transcripts homolog B (yeast), mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Upf3b, Length 2,344 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Upf3b-201ENSMUST00000076265 KcpQ3U492 1550 aa7.42□□□□□ -1.22
Upf3b-201ENSMUST00000076265 Gm9573F7C950 1606 aa7.42□□□□□ -1.22
Upf3b-201ENSMUST00000076265 Scn2aA0A0J9YTW6 2006 aa7.42□□□□□ -1.22
Upf3b-201ENSMUST00000076265 Trav5-1A0A075B5Z7 114 aa7.41□□□□□ -1.22
Upf3b-201ENSMUST00000076265 Trav10nA0A075B622 114 aa7.41□□□□□ -1.22
Upf3b-201ENSMUST00000076265 Trav10A0A075B642 114 aa7.41□□□□□ -1.22
Upf3b-201ENSMUST00000076265 Vmn1r232A2RTT5 351 aa7.41□□□□□ -1.22
Upf3b-201ENSMUST00000076265 Gm5629P06327 117 aa7.41□□□□□ -1.22
Upf3b-201ENSMUST00000076265 Mbd6Q3TY92 1003 aa7.41□□□□□ -1.22
Upf3b-201ENSMUST00000076265 Runx3Q64131 409 aa7.41□□□□□ -1.22
Upf3b-201ENSMUST00000076265 Prss27Q8BJR6 328 aa7.41□□□□□ -1.22
Upf3b-201ENSMUST00000076265 GatcQ8CBY0 155 aa7.41□□□□□ -1.22
Upf3b-201ENSMUST00000076265 Cml2Q8CHQ9 238 aa7.41□□□□□ -1.22
Upf3b-201ENSMUST00000076265 Olfr518Q8VEW1 333 aa7.41□□□□□ -1.22
Upf3b-201ENSMUST00000076265 Olfr836Q8VFJ3 317 aa7.41□□□□□ -1.22
Upf3b-201ENSMUST00000076265 Med28Q920D3 178 aa7.41□□□□□ -1.22
Upf3b-201ENSMUST00000076265 Foxi1Q922I5 372 aa7.41□□□□□ -1.22
Upf3b-201ENSMUST00000076265 Q9DAB9 146 aa7.41□□□□□ -1.22
Upf3b-201ENSMUST00000076265 Prl5a1Q9JII2 230 aa7.41□□□□□ -1.22
Upf3b-201ENSMUST00000076265 Hdgfl3Q9JMG7 202 aa7.41□□□□□ -1.22
Upf3b-201ENSMUST00000076265 Gm6890A2BG94 208 aa7.41□□□□□ -1.22
Upf3b-201ENSMUST00000076265 CymB7ZWD6 379 aa7.41□□□□□ -1.22
Upf3b-201ENSMUST00000076265 NapsaO09043 419 aa7.41□□□□□ -1.22
Upf3b-201ENSMUST00000076265 H2-Ab1P01921 265 aa7.41□□□□□ -1.22
Upf3b-201ENSMUST00000076265 Lgals1P16045 135 aaKnown RBP7.41□□□□□ -1.22
Upf3b-201ENSMUST00000076265 Defa2P28309 93 aa7.41□□□□□ -1.22
Upf3b-201ENSMUST00000076265 Sumo2P61957 95 aaKnown RBP7.41□□□□□ -1.22
Upf3b-201ENSMUST00000076265 Gimap1P70224 277 aa7.41□□□□□ -1.22
Upf3b-201ENSMUST00000076265 Thbs3Q05895 956 aa7.41□□□□□ -1.22
Upf3b-201ENSMUST00000076265 Riiad1Q3KNY5 119 aa7.41□□□□□ -1.22
Upf3b-201ENSMUST00000076265 Fthl17fQ3SXD2 176 aa7.41□□□□□ -1.22
Upf3b-201ENSMUST00000076265 Tas2r116Q7M713 305 aa7.41□□□□□ -1.22
Upf3b-201ENSMUST00000076265 Samd10Q7TST3 202 aa7.41□□□□□ -1.22
Upf3b-201ENSMUST00000076265 Hist3h2bbQ8CGP0 126 aa7.41□□□□□ -1.22
Upf3b-201ENSMUST00000076265 Zc3h3Q8CHP0 950 aa7.41□□□□□ -1.22
Upf3b-201ENSMUST00000076265 DhrsxQ8VBZ0 335 aa7.41□□□□□ -1.22
Upf3b-201ENSMUST00000076265 Exosc4Q921I9 245 aaKnown RBP7.41□□□□□ -1.22
Upf3b-201ENSMUST00000076265 Macrod1Q922B1 323 aa7.41□□□□□ -1.22
Upf3b-201ENSMUST00000076265 Mgst3Q9CPU4 153 aa7.41□□□□□ -1.22
Upf3b-201ENSMUST00000076265 Emc6Q9CQW0 110 aa7.41□□□□□ -1.22
Upf3b-201ENSMUST00000076265 Borcs7Q9CRC6 105 aa7.41□□□□□ -1.22
Upf3b-201ENSMUST00000076265 Arl2Q9D0J4 184 aa7.41□□□□□ -1.22
Upf3b-201ENSMUST00000076265 4930583I09RikQ9D2E3 102 aa7.41□□□□□ -1.22
Upf3b-201ENSMUST00000076265 Hist3h2baQ9D2U9 126 aa7.41□□□□□ -1.22
Upf3b-201ENSMUST00000076265 Dap3Q9ER88 391 aaKnown RBP7.41□□□□□ -1.22
Upf3b-201ENSMUST00000076265 Wdr61Q9ERF3 305 aa7.41□□□□□ -1.22
Upf3b-201ENSMUST00000076265 Cryba2Q9JJV1 197 aa7.41□□□□□ -1.22
Upf3b-201ENSMUST00000076265 Btnl10Q9JK39 275 aa7.41□□□□□ -1.22
Upf3b-201ENSMUST00000076265 Insl5Q9WUG6 135 aa7.41□□□□□ -1.22
Upf3b-201ENSMUST00000076265 Vmn1r2A2AMT6 306 aa7.4□□□□□ -1.22
Upf3b-201ENSMUST00000076265 Gm15821A6X8J8 139 aa7.4□□□□□ -1.22
Upf3b-201ENSMUST00000076265 Ism2D3Z6A3 493 aa7.4□□□□□ -1.22
Upf3b-201ENSMUST00000076265 Gm5286E0CXI6 357 aa7.4□□□□□ -1.22
Upf3b-201ENSMUST00000076265 Olfr609E9Q4X7 319 aa7.4□□□□□ -1.22
Upf3b-201ENSMUST00000076265 Vmn2r112L7N221 857 aa7.4□□□□□ -1.22
Upf3b-201ENSMUST00000076265 VipP32648 170 aa7.4□□□□□ -1.22
Upf3b-201ENSMUST00000076265 Slc25a5P51881 298 aaKnown RBP7.4□□□□□ -1.22
Upf3b-201ENSMUST00000076265 ElobP62869 118 aa7.4□□□□□ -1.22
Upf3b-201ENSMUST00000076265 Cxcr4P70658 359 aa7.4□□□□□ -1.22
Upf3b-201ENSMUST00000076265 Adra2aQ01338 450 aa7.4□□□□□ -1.22
Upf3b-201ENSMUST00000076265 Tex26Q0VB26 296 aa7.4□□□□□ -1.22
Upf3b-201ENSMUST00000076265 Pex11gQ6P6M5 241 aa7.4□□□□□ -1.22
Upf3b-201ENSMUST00000076265 Olfr487Q7TRU9 314 aa7.4□□□□□ -1.22
Upf3b-201ENSMUST00000076265 Mrps10Q80ZK0 160 aaKnown RBP7.4□□□□□ -1.22
Upf3b-201ENSMUST00000076265 Gm20738Q810R8 227 aa7.4□□□□□ -1.22
Upf3b-201ENSMUST00000076265 H2-M10.4Q85ZW8 331 aa7.4□□□□□ -1.22
Upf3b-201ENSMUST00000076265 Bricd5Q8BV89 174 aa7.4□□□□□ -1.22
Upf3b-201ENSMUST00000076265 Q8CF25 301 aa7.4□□□□□ -1.22
Upf3b-201ENSMUST00000076265 Aqp12Q8CHJ2 290 aa7.4□□□□□ -1.22
Upf3b-201ENSMUST00000076265 Olfr486Q8VFD0 314 aa7.4□□□□□ -1.22
Upf3b-201ENSMUST00000076265 Mfap3Q922T2 349 aa7.4□□□□□ -1.22
Upf3b-201ENSMUST00000076265 Stpg1Q9D2F5 341 aa7.4□□□□□ -1.22
Upf3b-201ENSMUST00000076265 Cst10Q9JM84 148 aa7.4□□□□□ -1.22
Upf3b-201ENSMUST00000076265 Ighv5-2A0A0A6YVX8 117 aa7.4□□□□□ -1.23
Upf3b-201ENSMUST00000076265 H60bB1B212 251 aa7.4□□□□□ -1.23
Upf3b-201ENSMUST00000076265 Gm6793B2RXM2 351 aa7.4□□□□□ -1.23
Upf3b-201ENSMUST00000076265 Olfr748E9Q9Z0 307 aa7.4□□□□□ -1.23
Upf3b-201ENSMUST00000076265 Ifitm7G3X9Z2 141 aa7.4□□□□□ -1.23
Upf3b-201ENSMUST00000076265 Gm9242J3QNY1 357 aa7.4□□□□□ -1.23
Upf3b-201ENSMUST00000076265 Olfr519K7N645 319 aa7.4□□□□□ -1.23
Upf3b-201ENSMUST00000076265 Efnb3O35393 340 aa7.4□□□□□ -1.23
Upf3b-201ENSMUST00000076265 Atp1b1P14094 304 aaKnown RBP7.4□□□□□ -1.23
Upf3b-201ENSMUST00000076265 Hmga1P17095 107 aaKnown RBP7.4□□□□□ -1.23
Upf3b-201ENSMUST00000076265 Olfr1537P34983 314 aa7.4□□□□□ -1.23
Upf3b-201ENSMUST00000076265 Gng4P50153 75 aa7.4□□□□□ -1.23
Upf3b-201ENSMUST00000076265 Loxl1P97873 607 aa7.4□□□□□ -1.23
Upf3b-201ENSMUST00000076265 Vwc2lQ505H4 222 aa7.4□□□□□ -1.23
Upf3b-201ENSMUST00000076265 Vdac2Q60930 295 aaKnown RBP7.4□□□□□ -1.23
Upf3b-201ENSMUST00000076265 Foxc1Q61572 553 aa7.4□□□□□ -1.23
Upf3b-201ENSMUST00000076265 Fbxl14Q8BID8 400 aa7.4□□□□□ -1.23
Upf3b-201ENSMUST00000076265 Nudt4Q8R2U6 179 aa7.4□□□□□ -1.23
Upf3b-201ENSMUST00000076265 Olfr53Q8VGL8 312 aa7.4□□□□□ -1.23
Upf3b-201ENSMUST00000076265 Ovca2Q9D7E3 225 aa7.4□□□□□ -1.23
Upf3b-201ENSMUST00000076265 Klra17Q9JMA4 273 aa7.4□□□□□ -1.23
Upf3b-201ENSMUST00000076265 SpaarA0A1B0GSZ0 75 aa7.39□□□□□ -1.23
Upf3b-201ENSMUST00000076265 Hacd4A2AKM2 232 aa7.39□□□□□ -1.23
Upf3b-201ENSMUST00000076265 Gm14124A2AU83 715 aa7.39□□□□□ -1.23
Upf3b-201ENSMUST00000076265 Mgst2A2RST1 147 aa7.39□□□□□ -1.23
Upf3b-201ENSMUST00000076265 eef1akmt3D3YWP0 232 aa7.39□□□□□ -1.23
Upf3b-201ENSMUST00000076265 Bbip1J3QMK2 67 aa7.39□□□□□ -1.23
Retrieved 100 of 22,080 RNA–protein pairs in 35.9 ms