RNA–Protein interactions for RNA: ENSMUST00000054384.5

Trim56-201, Transcript of E3 ubiquitin-protein ligase TRIM56, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Trim56, Length 9,279 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim56-201ENSMUST00000054384 Timp1P12032 205 aa10.45□□□□□ -0.74
Trim56-201ENSMUST00000054384 Tmem179bQ9CY24 219 aa10.45□□□□□ -0.74
Trim56-201ENSMUST00000054384 Cfap46E9Q2C0 2641 aa10.45□□□□□ -0.74
Trim56-201ENSMUST00000054384 CtgfP29268 348 aa10.45□□□□□ -0.74
Trim56-201ENSMUST00000054384 SelenohQ3UQA7 116 aa10.45□□□□□ -0.74
Trim56-201ENSMUST00000054384 Adgrg5Q3V3Z3 524 aa10.45□□□□□ -0.74
Trim56-201ENSMUST00000054384 B430218F22RikQ8BQR5 223 aa10.45□□□□□ -0.74
Trim56-201ENSMUST00000054384 Mrpl20Q9CQL4 149 aa10.45□□□□□ -0.74
Trim56-201ENSMUST00000054384 Zgrf1Q0VGT4 1863 aa10.45□□□□□ -0.74
Trim56-201ENSMUST00000054384 Taar4Q5QD15 347 aa10.45□□□□□ -0.74
Trim56-201ENSMUST00000054384 Scnm1Q8K136 229 aa10.45□□□□□ -0.74
Trim56-201ENSMUST00000054384 DptQ9QZZ6 201 aa10.45□□□□□ -0.74
Trim56-201ENSMUST00000054384 Rnf7Q9WTZ1 113 aa10.45□□□□□ -0.74
Trim56-201ENSMUST00000054384 4930426L09RikE9Q0N7 123 aa10.44□□□□□ -0.74
Trim56-201ENSMUST00000054384 Il25Q8VHH8 169 aa10.44□□□□□ -0.74
Trim56-201ENSMUST00000054384 ApooQ9DCZ4 198 aa10.44□□□□□ -0.74
Trim56-201ENSMUST00000054384 Npc2Q9Z0J0 149 aa10.44□□□□□ -0.74
Trim56-201ENSMUST00000054384 Igkv1-133A0A0B4J1H8 120 aa10.44□□□□□ -0.74
Trim56-201ENSMUST00000054384 Trav15d-2-dv6d-2A0A0G2JGQ7 117 aa10.44□□□□□ -0.74
Trim56-201ENSMUST00000054384 Vmn1r27K7N688 303 aa10.44□□□□□ -0.74
Trim56-201ENSMUST00000054384 Ins2P01326 110 aa10.44□□□□□ -0.74
Trim56-201ENSMUST00000054384 GferP56213 198 aa10.44□□□□□ -0.74
Trim56-201ENSMUST00000054384 Ear1P97426 155 aa10.44□□□□□ -0.74
Trim56-201ENSMUST00000054384 Htr1dQ61224 374 aa10.44□□□□□ -0.74
Trim56-201ENSMUST00000054384 Slc37a1Q8R070 531 aa10.44□□□□□ -0.74
Trim56-201ENSMUST00000054384 Lypd2Q9DD23 127 aa10.44□□□□□ -0.74
Trim56-201ENSMUST00000054384 Defb5Q9EPV9 64 aa10.44□□□□□ -0.74
Trim56-201ENSMUST00000054384 Kcne4Q9WTW3 170 aa10.44□□□□□ -0.74
Trim56-201ENSMUST00000054384 TncQ80YX1 2110 aa10.44□□□□□ -0.74
Trim56-201ENSMUST00000054384 Mfge8P21956 463 aaKnown RBP10.44□□□□□ -0.74
Trim56-201ENSMUST00000054384 AesP63002 197 aa10.44□□□□□ -0.74
Trim56-201ENSMUST00000054384 Coq2Q66JT7 374 aa10.44□□□□□ -0.74
Trim56-201ENSMUST00000054384 Mtch2Q791V5 303 aa10.44□□□□□ -0.74
Trim56-201ENSMUST00000054384 Clec14aQ8VCP9 459 aa10.44□□□□□ -0.74
Trim56-201ENSMUST00000054384 Gprin2D3Z1D7 455 aa10.44□□□□□ -0.74
Trim56-201ENSMUST00000054384 Defa20Q45VN2 95 aa10.44□□□□□ -0.74
Trim56-201ENSMUST00000054384 Acp7Q8BX37 438 aa10.44□□□□□ -0.74
Trim56-201ENSMUST00000054384 Olfr873Q8VFJ0 319 aa10.44□□□□□ -0.74
Trim56-201ENSMUST00000054384 Olfr1002Q8VFK2 318 aa10.44□□□□□ -0.74
Trim56-201ENSMUST00000054384 Olfr1256Q8VGP1 306 aa10.44□□□□□ -0.74
Trim56-201ENSMUST00000054384 Coa3Q9D2R6 108 aa10.44□□□□□ -0.74
Trim56-201ENSMUST00000054384 Syt11Q9R0N3 430 aa10.44□□□□□ -0.74
Trim56-201ENSMUST00000054384 Gstp1P19157 210 aa10.44□□□□□ -0.74
Trim56-201ENSMUST00000054384 Serf2P84102 59 aa10.44□□□□□ -0.74
Trim56-201ENSMUST00000054384 Olfr983Q8VG90 315 aa10.44□□□□□ -0.74
Trim56-201ENSMUST00000054384 PrndQ9QUG3 179 aa10.44□□□□□ -0.74
Trim56-201ENSMUST00000054384 Upk2P38575 184 aa10.44□□□□□ -0.74
Trim56-201ENSMUST00000054384 Olfr1185-ps1F6XP16 303 aa10.44□□□□□ -0.74
Trim56-201ENSMUST00000054384 Lbx1P52955 282 aa10.44□□□□□ -0.74
Trim56-201ENSMUST00000054384 Khdc1aQ3UWR2 166 aa10.44□□□□□ -0.74
Trim56-201ENSMUST00000054384 PmelQ60696 626 aa10.44□□□□□ -0.74
Trim56-201ENSMUST00000054384 Masp2Q91WP0 685 aa10.44□□□□□ -0.74
Trim56-201ENSMUST00000054384 Tceal8Q9CZY2 117 aa10.44□□□□□ -0.74
Trim56-201ENSMUST00000054384 HikeshiQ9DD02 197 aa10.44□□□□□ -0.74
Trim56-201ENSMUST00000054384 Trav17A0A075B655 113 aa10.44□□□□□ -0.74
Trim56-201ENSMUST00000054384 UcnP81615 122 aa10.44□□□□□ -0.74
Trim56-201ENSMUST00000054384 Dusp28Q8BTR5 163 aa10.44□□□□□ -0.74
Trim56-201ENSMUST00000054384 C1sbQ8CFG8 688 aa10.44□□□□□ -0.74
Trim56-201ENSMUST00000054384 Olfr1339Q8VGB1 315 aa10.44□□□□□ -0.74
Trim56-201ENSMUST00000054384 Asb10Q91ZT7 467 aa10.44□□□□□ -0.74
Trim56-201ENSMUST00000054384 MmdQ9CQY7 238 aa10.44□□□□□ -0.74
Trim56-201ENSMUST00000054384 Prg4Q9JM99 1054 aa10.44□□□□□ -0.74
Trim56-201ENSMUST00000054384 ApelaP0DMC4 54 aa10.43□□□□□ -0.74
Trim56-201ENSMUST00000054384 Gfra1P97785 468 aa10.43□□□□□ -0.74
Trim56-201ENSMUST00000054384 Tmem88bQ3TYP4 173 aa10.43□□□□□ -0.74
Trim56-201ENSMUST00000054384 Psg19Q4KL31 475 aa10.43□□□□□ -0.74
Trim56-201ENSMUST00000054384 Tmem106bQ80X71 275 aa10.43□□□□□ -0.74
Trim56-201ENSMUST00000054384 AdtrpQ8C138 230 aa10.43□□□□□ -0.74
Trim56-201ENSMUST00000054384 Klf17Q8CFA7 341 aa10.43□□□□□ -0.74
Trim56-201ENSMUST00000054384 Gp2Q9D733 531 aa10.43□□□□□ -0.74
Trim56-201ENSMUST00000054384 Tex101Q9JMI7 250 aa10.43□□□□□ -0.74
Trim56-201ENSMUST00000054384 SiglechB7ZMQ6 332 aa10.43□□□□□ -0.74
Trim56-201ENSMUST00000054384 MyocosQ3UWS6 143 aa10.43□□□□□ -0.74
Trim56-201ENSMUST00000054384 Slc18b1D3Z5L6 459 aa10.43□□□□□ -0.74
Trim56-201ENSMUST00000054384 Pebp1P70296 187 aaKnown RBP10.43□□□□□ -0.74
Trim56-201ENSMUST00000054384 Ms4a13Q5FWC3 203 aa10.43□□□□□ -0.74
Trim56-201ENSMUST00000054384 NmsQ5H8A1 153 aa10.43□□□□□ -0.74
Trim56-201ENSMUST00000054384 Olfr93Q6UAH1 312 aa10.43□□□□□ -0.74
Trim56-201ENSMUST00000054384 Prss45Q8K4I7 317 aa10.43□□□□□ -0.74
Trim56-201ENSMUST00000054384 Zfp236S4R299 1847 aa10.43□□□□□ -0.74
Trim56-201ENSMUST00000054384 Aadacl3A2A7Z8 408 aa10.43□□□□□ -0.74
Trim56-201ENSMUST00000054384 SinhcafQ8C8M1 221 aaKnown RBP10.43□□□□□ -0.74
Trim56-201ENSMUST00000054384 MturnQ8CGA4 131 aa10.43□□□□□ -0.74
Trim56-201ENSMUST00000054384 Akirin1Q99LF1 191 aa10.43□□□□□ -0.74
Trim56-201ENSMUST00000054384 Chst5Q9QUP4 395 aa10.43□□□□□ -0.74
Trim56-201ENSMUST00000054384 Col18a1P39061 1774 aa10.43□□□□□ -0.74
Trim56-201ENSMUST00000054384 OsmP53347 263 aa10.43□□□□□ -0.74
Trim56-201ENSMUST00000054384 RflnbQ5SVD0 216 aa10.43□□□□□ -0.74
Trim56-201ENSMUST00000054384 Tff3Q62395 81 aa10.43□□□□□ -0.74
Trim56-201ENSMUST00000054384 Gpr87Q99MT7 358 aa10.43□□□□□ -0.74
Trim56-201ENSMUST00000054384 Wipi1Q8R3E3 446 aa10.43□□□□□ -0.74
Trim56-201ENSMUST00000054384 Mrps16Q9CPX7 135 aaKnown RBP10.43□□□□□ -0.74
Trim56-201ENSMUST00000054384 Tex37Q9DAG4 180 aa10.43□□□□□ -0.74
Trim56-201ENSMUST00000054384 Dock4P59764 1978 aa10.43□□□□□ -0.74
Trim56-201ENSMUST00000054384 Olfr954Q9EQB6 314 aa10.43□□□□□ -0.74
Trim56-201ENSMUST00000054384 Slc35b1P97858 322 aa10.42□□□□□ -0.74
Trim56-201ENSMUST00000054384 Prss47A0A0N4SVQ0 395 aa10.42□□□□□ -0.74
Trim56-201ENSMUST00000054384 Zfp677Q6PEP4 634 aa10.42□□□□□ -0.74
Trim56-201ENSMUST00000054384 Map1lc3aQ91VR7 121 aa10.42□□□□□ -0.74
Trim56-201ENSMUST00000054384 Fdx2Q9CPW2 174 aa10.42□□□□□ -0.74
Retrieved 100 of 22,080 RNA–protein pairs in 58.4 ms