RNA–Protein interactions for RNA: ENSMUST00000042717.12

Trim39-201, Transcript of E3 ubiquitin-protein ligase TRIM39, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Trim39, Length 3,085 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim39-201ENSMUST00000042717 Pdlim4P70271 330 aa7.17□□□□□ -1.26
Trim39-201ENSMUST00000042717 Klf14Q19A41 325 aa7.17□□□□□ -1.26
Trim39-201ENSMUST00000042717 Mex3bQ69Z36 601 aaKnown RBP7.17□□□□□ -1.26
Trim39-201ENSMUST00000042717 Zfp663Q6NXM6 656 aa7.17□□□□□ -1.26
Trim39-201ENSMUST00000042717 OpalinQ7M750 143 aa7.17□□□□□ -1.26
Trim39-201ENSMUST00000042717 Olfr355Q8VFP6 310 aa7.17□□□□□ -1.26
Trim39-201ENSMUST00000042717 Ms4a8Q99N10 290 aa7.17□□□□□ -1.26
Trim39-201ENSMUST00000042717 Med12A2AGH6 2190 aa7.17□□□□□ -1.26
Trim39-201ENSMUST00000042717 Gm15127B1AVZ5 449 aa7.16□□□□□ -1.26
Trim39-201ENSMUST00000042717 Rhox3gB9EJQ9 160 aa7.16□□□□□ -1.26
Trim39-201ENSMUST00000042717 Gm2174F6ZVF2 133 aa7.16□□□□□ -1.26
Trim39-201ENSMUST00000042717 OpcmlG5E8G3 345 aa7.16□□□□□ -1.26
Trim39-201ENSMUST00000042717 Gm20877J3QPZ4 227 aa7.16□□□□□ -1.26
Trim39-201ENSMUST00000042717 BokO35425 213 aa7.16□□□□□ -1.26
Trim39-201ENSMUST00000042717 Cd200O54901 278 aa7.16□□□□□ -1.26
Trim39-201ENSMUST00000042717 Edn3P48299 214 aa7.16□□□□□ -1.26
Trim39-201ENSMUST00000042717 Hist1h2baP70696 127 aa7.16□□□□□ -1.26
Trim39-201ENSMUST00000042717 Gfod1Q3UHD2 390 aa7.16□□□□□ -1.26
Trim39-201ENSMUST00000042717 Wfdc8Q4KUS1 273 aa7.16□□□□□ -1.26
Trim39-201ENSMUST00000042717 Ltc4sQ60860 150 aa7.16□□□□□ -1.26
Trim39-201ENSMUST00000042717 DpcdQ8BPA8 203 aa7.16□□□□□ -1.26
Trim39-201ENSMUST00000042717 Ssxb2Q8C5Z3 165 aa7.16□□□□□ -1.26
Trim39-201ENSMUST00000042717 Q8VC23 124 aa7.16□□□□□ -1.26
Trim39-201ENSMUST00000042717 Actl6bQ99MR0 426 aa7.16□□□□□ -1.26
Trim39-201ENSMUST00000042717 ChodlQ9CXM0 273 aa7.16□□□□□ -1.26
Trim39-201ENSMUST00000042717 Tex43Q9D9I1 141 aa7.16□□□□□ -1.26
Trim39-201ENSMUST00000042717 Mrps15Q9DC71 258 aaKnown RBP7.16□□□□□ -1.26
Trim39-201ENSMUST00000042717 Fbln5Q9WVH9 448 aa7.16□□□□□ -1.26
Trim39-201ENSMUST00000042717 D930048N14RikA2AA67 225 aa7.16□□□□□ -1.26
Trim39-201ENSMUST00000042717 Gm15128A2ADW8 449 aa7.16□□□□□ -1.26
Trim39-201ENSMUST00000042717 Gm15093A2BI72 449 aa7.16□□□□□ -1.26
Trim39-201ENSMUST00000042717 Luzp4B1AV09 449 aa7.16□□□□□ -1.26
Trim39-201ENSMUST00000042717 Gm15107B1B0X0 449 aa7.16□□□□□ -1.26
Trim39-201ENSMUST00000042717 Gm15097E9QA14 449 aa7.16□□□□□ -1.26
Trim39-201ENSMUST00000042717 Gm5458L7N219 204 aa7.16□□□□□ -1.26
Trim39-201ENSMUST00000042717 Lin7cO88952 197 aaKnown RBP7.16□□□□□ -1.26
Trim39-201ENSMUST00000042717 Tcrg-V1P06325 135 aa7.16□□□□□ -1.26
Trim39-201ENSMUST00000042717 LtbP41155 306 aa7.16□□□□□ -1.26
Trim39-201ENSMUST00000042717 Il11P47873 199 aa7.16□□□□□ -1.26
Trim39-201ENSMUST00000042717 Dio1Q61153 257 aa7.16□□□□□ -1.26
Trim39-201ENSMUST00000042717 Gm15085Q62012 449 aa7.16□□□□□ -1.26
Trim39-201ENSMUST00000042717 Srsf1Q6PDM2 248 aaKnown RBP7.16□□□□□ -1.26
Trim39-201ENSMUST00000042717 Tbpl2Q6SJ95 350 aa7.16□□□□□ -1.26
Trim39-201ENSMUST00000042717 Vkorc1l1Q6TEK5 176 aa7.16□□□□□ -1.26
Trim39-201ENSMUST00000042717 Olfr1211Q7TR09 311 aa7.16□□□□□ -1.26
Trim39-201ENSMUST00000042717 Scnm1Q8K136 229 aa7.16□□□□□ -1.26
Trim39-201ENSMUST00000042717 Olfr1466Q8VFW4 310 aa7.16□□□□□ -1.26
Trim39-201ENSMUST00000042717 PigcQ9CXR4 297 aa7.16□□□□□ -1.26
Trim39-201ENSMUST00000042717 Vmn1r47Q9EQ51 310 aa7.16□□□□□ -1.26
Trim39-201ENSMUST00000042717 Wnt2bO70283 389 aa7.16□□□□□ -1.26
Trim39-201ENSMUST00000042717 CideaO70302 217 aa7.16□□□□□ -1.26
Trim39-201ENSMUST00000042717 Cst7O89098 144 aa7.16□□□□□ -1.26
Trim39-201ENSMUST00000042717 Fli1P26323 452 aa7.16□□□□□ -1.26
Trim39-201ENSMUST00000042717 Rnd3P61588 244 aa7.16□□□□□ -1.26
Trim39-201ENSMUST00000042717 Gnb2P62880 340 aa7.16□□□□□ -1.26
Trim39-201ENSMUST00000042717 NfybP63139 207 aa7.16□□□□□ -1.26
Trim39-201ENSMUST00000042717 Trdv4Q5R1A3 115 aa7.16□□□□□ -1.26
Trim39-201ENSMUST00000042717 Olfr139Q60891 315 aa7.16□□□□□ -1.26
Trim39-201ENSMUST00000042717 Olfr1341Q7TQV4 312 aa7.16□□□□□ -1.26
Trim39-201ENSMUST00000042717 Cstl1Q80Y72 140 aa7.16□□□□□ -1.26
Trim39-201ENSMUST00000042717 Mr1Q8HWB0 341 aa7.16□□□□□ -1.26
Trim39-201ENSMUST00000042717 SpartQ8R1X6 671 aa7.16□□□□□ -1.26
Trim39-201ENSMUST00000042717 Ptrh2Q8R2Y8 181 aaKnown RBP7.16□□□□□ -1.26
Trim39-201ENSMUST00000042717 Olfr1449Q8VEV8 314 aa7.16□□□□□ -1.26
Trim39-201ENSMUST00000042717 Olfr135Q8VEY4 312 aa7.16□□□□□ -1.26
Trim39-201ENSMUST00000042717 NcmapQ99JS0 100 aa7.16□□□□□ -1.26
Trim39-201ENSMUST00000042717 Prr15Q9D1T5 122 aa7.16□□□□□ -1.26
Trim39-201ENSMUST00000042717 RhcgQ9QXP0 498 aa7.16□□□□□ -1.26
Trim39-201ENSMUST00000042717 Aifm1Q9Z0X1 612 aa7.16□□□□□ -1.26
Trim39-201ENSMUST00000042717 TrrapQ80YV3 2565 aaKnown RBP7.15□□□□□ -1.26
Trim39-201ENSMUST00000042717 Trav15-2-dv6-2A0A075B650 123 aa7.15□□□□□ -1.26
Trim39-201ENSMUST00000042717 Gm21117A0A087WPJ9 222 aa7.15□□□□□ -1.26
Trim39-201ENSMUST00000042717 Gm20937A0A087WQA3 222 aa7.15□□□□□ -1.26
Trim39-201ENSMUST00000042717 Gm21258A0A087WQC7 222 aa7.15□□□□□ -1.26
Trim39-201ENSMUST00000042717 Olfr467L7N455 308 aa7.15□□□□□ -1.26
Trim39-201ENSMUST00000042717 P01630 113 aa7.15□□□□□ -1.26
Trim39-201ENSMUST00000042717 Iglc3P01845 104 aa7.15□□□□□ -1.26
Trim39-201ENSMUST00000042717 Igsf11P0C673 428 aa7.15□□□□□ -1.26
Trim39-201ENSMUST00000042717 IappP12968 93 aa7.15□□□□□ -1.26
Trim39-201ENSMUST00000042717 SftpcP21841 193 aa7.15□□□□□ -1.26
Trim39-201ENSMUST00000042717 Dnase1P49183 284 aa7.15□□□□□ -1.26
Trim39-201ENSMUST00000042717 Npas1P97459 594 aa7.15□□□□□ -1.26
Trim39-201ENSMUST00000042717 Scgb2b24Q7M747 112 aa7.15□□□□□ -1.26
Trim39-201ENSMUST00000042717 Olfr1509Q7TQQ0 308 aa7.15□□□□□ -1.26
Trim39-201ENSMUST00000042717 Olfr901Q7TRD1 311 aa7.15□□□□□ -1.26
Trim39-201ENSMUST00000042717 Stpg2Q8C8J0 561 aa7.15□□□□□ -1.26
Trim39-201ENSMUST00000042717 Olfr1448Q8VFX1 314 aa7.15□□□□□ -1.26
Trim39-201ENSMUST00000042717 Rcl1Q9JJT0 373 aaKnown RBP7.15□□□□□ -1.26
Trim39-201ENSMUST00000042717 Klk4Q9Z0M1 255 aa7.15□□□□□ -1.26
Trim39-201ENSMUST00000042717 Usf3B2RUQ2 2221 aa7.15□□□□□ -1.26
Trim39-201ENSMUST00000042717 Utp20Q5XG71 2788 aaKnown RBP7.15□□□□□ -1.26
Trim39-201ENSMUST00000042717 Ighv5-2A0A0A6YVX8 117 aa7.15□□□□□ -1.27
Trim39-201ENSMUST00000042717 Gm2026A2ART4 498 aa7.15□□□□□ -1.27
Trim39-201ENSMUST00000042717 Olfr1158A2BHP7 313 aa7.15□□□□□ -1.27
Trim39-201ENSMUST00000042717 Olfr571E9Q407 322 aa7.15□□□□□ -1.27
Trim39-201ENSMUST00000042717 Olfr62L7MU75 315 aa7.15□□□□□ -1.27
Trim39-201ENSMUST00000042717 Gpr33O88416 339 aa7.15□□□□□ -1.27
Trim39-201ENSMUST00000042717 P01725 110 aa7.15□□□□□ -1.27
Trim39-201ENSMUST00000042717 PipP02816 146 aa7.15□□□□□ -1.27
Trim39-201ENSMUST00000042717 Mtnd6P03925 172 aa7.15□□□□□ -1.27
Retrieved 100 of 22,080 RNA–protein pairs in 45 ms