RNA–Protein interactions for RNA: ENSMUST00000022220.12

Msh3-201, Transcript of DNA mismatch repair protein Msh3, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Msh3, Length 3,937 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Msh3-201ENSMUST00000022220 AgaQ64191 346 aa9.31□□□□□ -0.92
Msh3-201ENSMUST00000022220 PnlipQ6P8U6 465 aa9.31□□□□□ -0.92
Msh3-201ENSMUST00000022220 Gm10277Q6R5C6 214 aa9.31□□□□□ -0.92
Msh3-201ENSMUST00000022220 Prickle3Q80VL3 624 aa9.31□□□□□ -0.92
Msh3-201ENSMUST00000022220 TskuQ8CBR6 354 aa9.31□□□□□ -0.92
Msh3-201ENSMUST00000022220 Rnf126Q91YL2 313 aa9.31□□□□□ -0.92
Msh3-201ENSMUST00000022220 Barx1Q9ER42 254 aa9.31□□□□□ -0.92
Msh3-201ENSMUST00000022220 D830044I16RikA0A1D5RM53 117 aa9.3□□□□□ -0.92
Msh3-201ENSMUST00000022220 Rdh16O54909 317 aa9.3□□□□□ -0.92
Msh3-201ENSMUST00000022220 Igh-3P01867 404 aa9.3□□□□□ -0.92
Msh3-201ENSMUST00000022220 Rpp21Q8R040 150 aa9.3□□□□□ -0.92
Msh3-201ENSMUST00000022220 Vmn1r237Q8R296 289 aa9.3□□□□□ -0.92
Msh3-201ENSMUST00000022220 Herpud1Q9JJK5 391 aa9.3□□□□□ -0.92
Msh3-201ENSMUST00000022220 Chd7A2AJK6 2986 aaKnown RBP9.3□□□□□ -0.92
Msh3-201ENSMUST00000022220 Gm15440D3Z3P4 90 aa9.3□□□□□ -0.92
Msh3-201ENSMUST00000022220 Olfr251E9Q891 316 aa9.3□□□□□ -0.92
Msh3-201ENSMUST00000022220 Tmem106bQ80X71 275 aa9.3□□□□□ -0.92
Msh3-201ENSMUST00000022220 Mpv17lQ99MS3 194 aa9.3□□□□□ -0.92
Msh3-201ENSMUST00000022220 Map1lc3bQ9CQV6 125 aa9.3□□□□□ -0.92
Msh3-201ENSMUST00000022220 9130008F23RikQ9D2Z6 181 aa9.3□□□□□ -0.92
Msh3-201ENSMUST00000022220 Btbd17Q9DB72 478 aa9.3□□□□□ -0.92
Msh3-201ENSMUST00000022220 Olfr19Q9JHB2 309 aa9.3□□□□□ -0.92
Msh3-201ENSMUST00000022220 FetubQ9QXC1 388 aa9.3□□□□□ -0.92
Msh3-201ENSMUST00000022220 Hsd17b6Q9R092 317 aa9.3□□□□□ -0.92
Msh3-201ENSMUST00000022220 Col4a6B1AVK5 1691 aa9.3□□□□□ -0.92
Msh3-201ENSMUST00000022220 Gm20918J3QN17 227 aa9.3□□□□□ -0.92
Msh3-201ENSMUST00000022220 Lyz1P17897 148 aa9.3□□□□□ -0.92
Msh3-201ENSMUST00000022220 Tm2d3Q8BJ83 261 aa9.3□□□□□ -0.92
Msh3-201ENSMUST00000022220 Scrt2Q8BTH6 311 aa9.3□□□□□ -0.92
Msh3-201ENSMUST00000022220 6030452D12RikQ8CD33 222 aa9.3□□□□□ -0.92
Msh3-201ENSMUST00000022220 Mpped1Q91ZG2 326 aa9.3□□□□□ -0.92
Msh3-201ENSMUST00000022220 Atp23Q9CWQ3 201 aa9.3□□□□□ -0.92
Msh3-201ENSMUST00000022220 Fam89bQ9QUI1 189 aa9.3□□□□□ -0.92
Msh3-201ENSMUST00000022220 Timm9Q9WV98 89 aaKnown RBP9.3□□□□□ -0.92
Msh3-201ENSMUST00000022220 Trav6n-7A0A075B6A6 116 aa9.29□□□□□ -0.92
Msh3-201ENSMUST00000022220 Casp6O08738 276 aa9.29□□□□□ -0.92
Msh3-201ENSMUST00000022220 Hist1h3aP68433 136 aa9.29□□□□□ -0.92
Msh3-201ENSMUST00000022220 Siah2Q06986 325 aa9.29□□□□□ -0.92
Msh3-201ENSMUST00000022220 Zfp3Q8BLB0 497 aa9.29□□□□□ -0.92
Msh3-201ENSMUST00000022220 Olfr1475Q8VEV6 314 aa9.29□□□□□ -0.92
Msh3-201ENSMUST00000022220 Pbp2Q8VIN1 187 aa9.29□□□□□ -0.92
Msh3-201ENSMUST00000022220 Q9DAL9 119 aa9.29□□□□□ -0.92
Msh3-201ENSMUST00000022220 Chst1Q9EQC0 411 aa9.29□□□□□ -0.92
Msh3-201ENSMUST00000022220 Gm4881A0A140LIR9 352 aa9.29□□□□□ -0.92
Msh3-201ENSMUST00000022220 Olfr1320A2AHM8 319 aa9.29□□□□□ -0.92
Msh3-201ENSMUST00000022220 Kcnk15B2RVL1 343 aa9.29□□□□□ -0.92
Msh3-201ENSMUST00000022220 Olfr178E9Q9T3 319 aa9.29□□□□□ -0.92
Msh3-201ENSMUST00000022220 Cst7O89098 144 aa9.29□□□□□ -0.92
Msh3-201ENSMUST00000022220 Zfp27P10077 819 aa9.29□□□□□ -0.92
Msh3-201ENSMUST00000022220 Gpr12P35412 334 aa9.29□□□□□ -0.92
Msh3-201ENSMUST00000022220 ElnP54320 860 aa9.29□□□□□ -0.92
Msh3-201ENSMUST00000022220 AesP63002 197 aa9.29□□□□□ -0.92
Msh3-201ENSMUST00000022220 Gpr183Q3U6B2 357 aa9.29□□□□□ -0.92
Msh3-201ENSMUST00000022220 Scgb2b24Q7M747 112 aa9.29□□□□□ -0.92
Msh3-201ENSMUST00000022220 Fam78bQ8BQN5 261 aa9.29□□□□□ -0.92
Msh3-201ENSMUST00000022220 Prss35Q8C0F9 409 aa9.29□□□□□ -0.92
Msh3-201ENSMUST00000022220 Prss45Q8K4I7 317 aa9.29□□□□□ -0.92
Msh3-201ENSMUST00000022220 Vmn1r233Q8R294 319 aa9.29□□□□□ -0.92
Msh3-201ENSMUST00000022220 Olfr822Q8VFU1 312 aa9.29□□□□□ -0.92
Msh3-201ENSMUST00000022220 Btf3l4Q9CQH7 158 aaKnown RBP9.29□□□□□ -0.92
Msh3-201ENSMUST00000022220 Nudt3Q9JI46 168 aa9.29□□□□□ -0.92
Msh3-201ENSMUST00000022220 Tmem183Q9JJB9 375 aa9.29□□□□□ -0.92
Msh3-201ENSMUST00000022220 Fbxw4Q9JMJ2 410 aa9.29□□□□□ -0.92
Msh3-201ENSMUST00000022220 Olfr1264Q9R0K2 308 aa9.29□□□□□ -0.92
Msh3-201ENSMUST00000022220 Trbv15A0A0A6YYE3 115 aa9.29□□□□□ -0.92
Msh3-201ENSMUST00000022220 Olfr1104A2AVB5 310 aa9.29□□□□□ -0.92
Msh3-201ENSMUST00000022220 Gm5108J3QP01 101 aa9.29□□□□□ -0.92
Msh3-201ENSMUST00000022220 Olfr191L7N1Z8 309 aa9.29□□□□□ -0.92
Msh3-201ENSMUST00000022220 Vmn1r128L7N2B4 307 aa9.29□□□□□ -0.92
Msh3-201ENSMUST00000022220 S100a10P08207 97 aa9.29□□□□□ -0.92
Msh3-201ENSMUST00000022220 Olfr15P23275 312 aa9.29□□□□□ -0.92
Msh3-201ENSMUST00000022220 GrnP28798 589 aaKnown RBP9.29□□□□□ -0.92
Msh3-201ENSMUST00000022220 Mettl4Q3U034 471 aa9.29□□□□□ -0.92
Msh3-201ENSMUST00000022220 Samt2Q497M0 247 aa9.29□□□□□ -0.92
Msh3-201ENSMUST00000022220 Rhox10Q4TU83 196 aa9.29□□□□□ -0.92
Msh3-201ENSMUST00000022220 Uqcc3Q8K2T4 89 aa9.29□□□□□ -0.92
Msh3-201ENSMUST00000022220 Prodh2Q8VCZ9 456 aa9.29□□□□□ -0.92
Msh3-201ENSMUST00000022220 SetxA2AKX3 2646 aa9.29□□□□□ -0.92
Msh3-201ENSMUST00000022220 MgamB5THE2 1827 aa9.28□□□□□ -0.92
Msh3-201ENSMUST00000022220 Igkv6-14A0A140T8P1 115 aa9.28□□□□□ -0.92
Msh3-201ENSMUST00000022220 Gm4787B2RUD9 748 aa9.28□□□□□ -0.92
Msh3-201ENSMUST00000022220 Gm3072F6SKY8 209 aa9.28□□□□□ -0.92
Msh3-201ENSMUST00000022220 Chek1O35280 476 aa9.28□□□□□ -0.92
Msh3-201ENSMUST00000022220 Mdga2P60755 949 aa9.28□□□□□ -0.92
Msh3-201ENSMUST00000022220 Q0VG62 139 aa9.28□□□□□ -0.92
Msh3-201ENSMUST00000022220 Apobec4Q497M3 374 aa9.28□□□□□ -0.92
Msh3-201ENSMUST00000022220 SlaQ60898 281 aa9.28□□□□□ -0.92
Msh3-201ENSMUST00000022220 H2-M10.6Q85ZW5 330 aa9.28□□□□□ -0.92
Msh3-201ENSMUST00000022220 Rnd1Q8BLR7 232 aa9.28□□□□□ -0.92
Msh3-201ENSMUST00000022220 Olfr490Q8VFD2 314 aa9.28□□□□□ -0.92
Msh3-201ENSMUST00000022220 Tmem100Q9CQG9 134 aa9.28□□□□□ -0.92
Msh3-201ENSMUST00000022220 Nicn1Q9CQM0 213 aa9.28□□□□□ -0.92
Msh3-201ENSMUST00000022220 Ndufb8Q9D6J5 186 aa9.28□□□□□ -0.92
Msh3-201ENSMUST00000022220 Sun5Q9DA32 373 aa9.28□□□□□ -0.92
Msh3-201ENSMUST00000022220 Olfr418A0A140T8J6 310 aa9.28□□□□□ -0.92
Msh3-201ENSMUST00000022220 Gm6665F6Y363 85 aa9.28□□□□□ -0.92
Msh3-201ENSMUST00000022220 Ptbp1P17225 527 aaKnown RBP9.28□□□□□ -0.92
Msh3-201ENSMUST00000022220 Mcpt8P43430 247 aa9.28□□□□□ -0.92
Msh3-201ENSMUST00000022220 Rims4P60191 269 aa9.28□□□□□ -0.92
Msh3-201ENSMUST00000022220 Ctxn2Q3URE8 81 aa9.28□□□□□ -0.92
Retrieved 100 of 22,080 RNA–protein pairs in 35.9 ms