RNA–Protein interactions for RNA: ENST00000637823.1

CLN6-223, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 5

Gene CLN6, Length 717 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-223ENST00000637823 FAM223AQ8IWN6 122 aa9.19□□□□□ -0.94
CLN6-223ENST00000637823 OR10G4Q8NGN3 311 aa9.19□□□□□ -0.94
CLN6-223ENST00000637823 OR10G9Q8NGN4 311 aa9.19□□□□□ -0.94
CLN6-223ENST00000637823 OR10G7Q8NGN6 311 aa9.19□□□□□ -0.94
CLN6-223ENST00000637823 MS4A10Q96PG2 267 aa9.19□□□□□ -0.94
CLN6-223ENST00000637823 JMJD8Q96S16 334 aa9.19□□□□□ -0.94
CLN6-223ENST00000637823 VSIRQ9H7M9 311 aa9.19□□□□□ -0.94
CLN6-223ENST00000637823 ESM1Q9NQ30 184 aa9.19□□□□□ -0.94
CLN6-223ENST00000637823 SLC39A9Q9NUM3 307 aa9.19□□□□□ -0.94
CLN6-223ENST00000637823 C21orf62Q9NYP8 219 aa9.19□□□□□ -0.94
CLN6-223ENST00000637823 TRBV7-1A0A0A6YYK4 115 aa9.18□□□□□ -0.94
CLN6-223ENST00000637823 FAM181BA6NEQ2 426 aa9.18□□□□□ -0.94
CLN6-223ENST00000637823 MFSD2BA6NFX1 497 aa9.18□□□□□ -0.94
CLN6-223ENST00000637823 INAFM1C9JVW0 142 aa9.18□□□□□ -0.94
CLN6-223ENST00000637823 SCGB2A1O75556 95 aa9.18□□□□□ -0.94
CLN6-223ENST00000637823 YIF1AO95070 293 aa9.18□□□□□ -0.94
CLN6-223ENST00000637823 TRGV3P03979 118 aa9.18□□□□□ -0.94
CLN6-223ENST00000637823 RNASE1P07998 156 aaKnown RBP9.18□□□□□ -0.94
CLN6-223ENST00000637823 IGLC1P0CG04 106 aa9.18□□□□□ -0.94
CLN6-223ENST00000637823 HILS1P60008 231 aa9.18□□□□□ -0.94
CLN6-223ENST00000637823 C15orf32Q32M92 178 aa9.18□□□□□ -0.94
CLN6-223ENST00000637823 PXDC1Q5TGL8 231 aa9.18□□□□□ -0.94
CLN6-223ENST00000637823 Q6ZRG5 221 aa9.18□□□□□ -0.94
CLN6-223ENST00000637823 Q71RC1 249 aaPredicted RBP9.18□□□□□ -0.94
CLN6-223ENST00000637823 STPG3Q8N7X2 389 aa9.18□□□□□ -0.94
CLN6-223ENST00000637823 BPIFCQ8NFQ6 507 aa9.18□□□□□ -0.94
CLN6-223ENST00000637823 EEF1AKMT3Q96AZ1 226 aa9.18□□□□□ -0.94
CLN6-223ENST00000637823 USMG5Q96IX5 58 aa9.18□□□□□ -0.94
CLN6-223ENST00000637823 ATP6V0BQ99437 205 aa9.18□□□□□ -0.94
CLN6-223ENST00000637823 C19orf24Q9BVV8 132 aa9.18□□□□□ -0.94
CLN6-223ENST00000637823 MED9Q9NWA0 146 aa9.18□□□□□ -0.94
CLN6-223ENST00000637823 GAR1Q9NY12 217 aaKnown RBP9.18□□□□□ -0.94
CLN6-223ENST00000637823 MTORP42345 2549 aa9.17□□□□□ -0.94
CLN6-223ENST00000637823 GNG7O60262 68 aa9.17□□□□□ -0.94
CLN6-223ENST00000637823 IGHG4P01861 327 aa9.17□□□□□ -0.94
CLN6-223ENST00000637823 CRYBA1P05813 215 aa9.17□□□□□ -0.94
CLN6-223ENST00000637823 H2AFB1P0C5Y9 115 aa9.17□□□□□ -0.94
CLN6-223ENST00000637823 PF4V1P10720 104 aa9.17□□□□□ -0.94
CLN6-223ENST00000637823 FHITP49789 147 aa9.17□□□□□ -0.94
CLN6-223ENST00000637823 RAB2AP61019 212 aa9.17□□□□□ -0.94
CLN6-223ENST00000637823 SLC35B1P78383 322 aa9.17□□□□□ -0.94
CLN6-223ENST00000637823 ZNF90Q03938 601 aa9.17□□□□□ -0.94
CLN6-223ENST00000637823 ZNF616Q08AN1 781 aa9.17□□□□□ -0.94
CLN6-223ENST00000637823 TMEM95Q3KNT9 176 aa9.17□□□□□ -0.94
CLN6-223ENST00000637823 TIGITQ495A1 244 aa9.17□□□□□ -0.94
CLN6-223ENST00000637823 Q56UQ5 140 aa9.17□□□□□ -0.94
CLN6-223ENST00000637823 RPP25LQ8N5L8 163 aaKnown RBP9.17□□□□□ -0.94
CLN6-223ENST00000637823 LYPD6BQ8NI32 183 aa9.17□□□□□ -0.94
CLN6-223ENST00000637823 ZNF502Q8TBZ5 544 aa9.17□□□□□ -0.94
CLN6-223ENST00000637823 MBD3L1Q8WWY6 194 aa9.17□□□□□ -0.94
CLN6-223ENST00000637823 ACTR3CQ9C0K3 210 aaPredicted RBP9.17□□□□□ -0.94
CLN6-223ENST00000637823 PFDN2Q9UHV9 154 aa9.17□□□□□ -0.94
CLN6-223ENST00000637823 S4R3C0 116 aa9.17□□□□□ -0.94
CLN6-223ENST00000637823 TRAV1-1A0A0B4J248 108 aa9.16□□□□□ -0.94
CLN6-223ENST00000637823 A0A0G2JLM5 398 aa9.16□□□□□ -0.94
CLN6-223ENST00000637823 NUDT19A8MXV4 375 aa9.16□□□□□ -0.94
CLN6-223ENST00000637823 SEC14L6B5MCN3 397 aa9.16□□□□□ -0.94
CLN6-223ENST00000637823 F8W735 103 aaPredicted RBP9.16□□□□□ -0.94
CLN6-223ENST00000637823 TEX46H3BTG2 121 aa9.16□□□□□ -0.94
CLN6-223ENST00000637823 IGKV1-17P01599 117 aa9.16□□□□□ -0.94
CLN6-223ENST00000637823 GATA2P23769 480 aaPredicted RBP9.16□□□□□ -0.94
CLN6-223ENST00000637823 RAB9AP51151 201 aa9.16□□□□□ -0.94
CLN6-223ENST00000637823 TPPP2P59282 170 aa9.16□□□□□ -0.94
CLN6-223ENST00000637823 YPEL3P61236 119 aaPredicted RBP9.16□□□□□ -0.94
CLN6-223ENST00000637823 RCC1LQ96I51 464 aaKnown RBP9.16□□□□□ -0.94
CLN6-223ENST00000637823 HRH4Q9H3N8 390 aa9.16□□□□□ -0.94
CLN6-223ENST00000637823 DNAJC4Q9NNZ3 241 aa9.16□□□□□ -0.94
CLN6-223ENST00000637823 ZFHX3Q15911 3703 aa9.16□□□□□ -0.94
CLN6-223ENST00000637823 ANK3Q12955 4377 aaKnown RBP9.15□□□□□ -0.94
CLN6-223ENST00000637823 CTXND1A0A1B0GTU2 59 aa9.15□□□□□ -0.94
CLN6-223ENST00000637823 A0A1W2PPV4 95 aa9.15□□□□□ -0.94
CLN6-223ENST00000637823 PSMB11A5LHX3 300 aa9.15□□□□□ -0.94
CLN6-223ENST00000637823 CRLF1O75462 422 aa9.15□□□□□ -0.94
CLN6-223ENST00000637823 TOMM40O96008 361 aa9.15□□□□□ -0.94
CLN6-223ENST00000637823 IGHV3-23P01764 117 aa9.15□□□□□ -0.94
CLN6-223ENST00000637823 HBE1P02100 147 aa9.15□□□□□ -0.94
CLN6-223ENST00000637823 CTSGP08311 255 aa9.15□□□□□ -0.94
CLN6-223ENST00000637823 RD3LP0DJH9 198 aa9.15□□□□□ -0.94
CLN6-223ENST00000637823 PSG1P11464 419 aa9.15□□□□□ -0.94
CLN6-223ENST00000637823 PSMB8P28062 276 aa9.15□□□□□ -0.94
CLN6-223ENST00000637823 PLP1P60201 277 aa9.15□□□□□ -0.94
CLN6-223ENST00000637823 RHOBP62745 196 aa9.15□□□□□ -0.94
CLN6-223ENST00000637823 DEFA5Q01523 94 aa9.15□□□□□ -0.94
CLN6-223ENST00000637823 FOXE3Q13461 319 aa9.15□□□□□ -0.94
CLN6-223ENST00000637823 ZNF726P1Q15940 193 aa9.15□□□□□ -0.94
CLN6-223ENST00000637823 GCSAMLQ5JQS6 135 aa9.15□□□□□ -0.94
CLN6-223ENST00000637823 FAM122CQ6P4D5 195 aa9.15□□□□□ -0.94
CLN6-223ENST00000637823 TEX38Q6PEX7 206 aa9.15□□□□□ -0.94
CLN6-223ENST00000637823 Q6ZSV7 163 aa9.15□□□□□ -0.94
CLN6-223ENST00000637823 SLC7A5P1Q8MH63 180 aa9.15□□□□□ -0.94
CLN6-223ENST00000637823 COMMD1Q8N668 190 aa9.15□□□□□ -0.94
CLN6-223ENST00000637823 OR1L4Q8NGR5 311 aa9.15□□□□□ -0.94
CLN6-223ENST00000637823 GATAD1Q8WUU5 269 aa9.15□□□□□ -0.94
CLN6-223ENST00000637823 SFT2D1Q8WV19 159 aa9.15□□□□□ -0.94
CLN6-223ENST00000637823 PFDN5Q99471 154 aa9.15□□□□□ -0.94
CLN6-223ENST00000637823 RNF2Q99496 336 aa9.15□□□□□ -0.94
CLN6-223ENST00000637823 KLK15Q9H2R5 256 aa9.15□□□□□ -0.94
CLN6-223ENST00000637823 SERTAD4Q9NUC0 356 aa9.15□□□□□ -0.94
CLN6-223ENST00000637823 NSD1Q96L73 2696 aaPredicted RBP9.14□□□□□ -0.95
CLN6-223ENST00000637823 ELOA3CA0A087WX78 387 aaPredicted RBP9.14□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 101.1 ms