RNA–Protein interactions for RNA: ENST00000637276.1

CACNA1A-238, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CACNA1A, Length 7,135 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-238ENST00000637276 A0A1B0GUT8 65 aa13.68□□□□□ -0.22
CACNA1A-238ENST00000637276 RNF223E7ERA6 249 aa13.68□□□□□ -0.22
CACNA1A-238ENST00000637276 PAX1P15863 534 aa13.68□□□□□ -0.22
CACNA1A-238ENST00000637276 ZIC4Q8N9L1 334 aa13.68□□□□□ -0.22
CACNA1A-238ENST00000637276 MED12Q93074 2177 aa13.68□□□□□ -0.22
CACNA1A-238ENST00000637276 SLC25A47Q6Q0C1 308 aa13.68□□□□□ -0.22
CACNA1A-238ENST00000637276 C4orf51C9J302 202 aa13.67□□□□□ -0.22
CACNA1A-238ENST00000637276 PRDM13Q9H4Q3 707 aa13.67□□□□□ -0.22
CACNA1A-238ENST00000637276 EXOC3-AS1Q8N2X6 119 aa13.67□□□□□ -0.22
CACNA1A-238ENST00000637276 TMEM187Q14656 261 aa13.67□□□□□ -0.22
CACNA1A-238ENST00000637276 C1QL4Q86Z23 238 aa13.67□□□□□ -0.22
CACNA1A-238ENST00000637276 THADAQ6YHU6 1953 aa13.67□□□□□ -0.22
CACNA1A-238ENST00000637276 NDUFA2O43678 99 aa13.67□□□□□ -0.22
CACNA1A-238ENST00000637276 PAX8Q06710 450 aa13.67□□□□□ -0.22
CACNA1A-238ENST00000637276 WNK2Q9Y3S1 2297 aa13.67□□□□□ -0.22
CACNA1A-238ENST00000637276 XCL2Q9UBD3 114 aa13.67□□□□□ -0.22
CACNA1A-238ENST00000637276 IRF3Q14653 427 aa13.66□□□□□ -0.22
CACNA1A-238ENST00000637276 ZXDCQ2QGD7 858 aaPredicted RBP13.66□□□□□ -0.22
CACNA1A-238ENST00000637276 RAMP3O60896 148 aa13.66□□□□□ -0.22
CACNA1A-238ENST00000637276 UBE2BP63146 152 aa13.66□□□□□ -0.22
CACNA1A-238ENST00000637276 ORMDL3Q8N138 153 aa13.66□□□□□ -0.22
CACNA1A-238ENST00000637276 SLC50A1Q9BRV3 221 aa13.66□□□□□ -0.22
CACNA1A-238ENST00000637276 ATXN8Q156A1 80 aa13.66□□□□□ -0.22
CACNA1A-238ENST00000637276 RNASE13Q5GAN3 156 aaKnown RBP13.66□□□□□ -0.22
CACNA1A-238ENST00000637276 Q8TAT8 98 aa13.66□□□□□ -0.22
CACNA1A-238ENST00000637276 BCORQ6W2J9 1755 aa13.66□□□□□ -0.22
CACNA1A-238ENST00000637276 IGHV1-2P23083 117 aa13.66□□□□□ -0.22
CACNA1A-238ENST00000637276 KLF17Q5JT82 389 aaPredicted RBP13.66□□□□□ -0.22
CACNA1A-238ENST00000637276 TMEM256Q8N2U0 113 aa13.66□□□□□ -0.22
CACNA1A-238ENST00000637276 NEUROG1Q92886 237 aa13.66□□□□□ -0.22
CACNA1A-238ENST00000637276 IFI27L2Q9H2X8 130 aa13.66□□□□□ -0.22
CACNA1A-238ENST00000637276 LGALS1P09382 135 aaKnown RBP13.66□□□□□ -0.22
CACNA1A-238ENST00000637276 FMC1Q96HJ9 113 aa13.66□□□□□ -0.22
CACNA1A-238ENST00000637276 DOCK6Q96HP0 2047 aa13.66□□□□□ -0.22
CACNA1A-238ENST00000637276 NMBP08949 121 aa13.66□□□□□ -0.22
CACNA1A-238ENST00000637276 JPT1Q9UK76 154 aa13.66□□□□□ -0.22
CACNA1A-238ENST00000637276 CACNA1EQ15878 2313 aa13.66□□□□□ -0.22
CACNA1A-238ENST00000637276 IGKV1OR2-108A0A075B7D4 117 aa13.65□□□□□ -0.22
CACNA1A-238ENST00000637276 A0A0J9YY99 117 aa13.65□□□□□ -0.22
CACNA1A-238ENST00000637276 GAGE12JA6NER3 117 aa13.65□□□□□ -0.22
CACNA1A-238ENST00000637276 GAGE1Q13065 139 aa13.65□□□□□ -0.22
CACNA1A-238ENST00000637276 GAGE4Q13068 117 aa13.65□□□□□ -0.22
CACNA1A-238ENST00000637276 GAGE5Q13069 117 aa13.65□□□□□ -0.22
CACNA1A-238ENST00000637276 TAL2Q16559 108 aa13.65□□□□□ -0.22
CACNA1A-238ENST00000637276 GAGE13Q4V321 117 aa13.65□□□□□ -0.22
CACNA1A-238ENST00000637276 ATAD5Q96QE3 1844 aa13.65□□□□□ -0.22
CACNA1A-238ENST00000637276 ANKRD36A6QL64 1941 aa13.65□□□□□ -0.22
CACNA1A-238ENST00000637276 THBDP07204 575 aa13.65□□□□□ -0.22
CACNA1A-238ENST00000637276 ORMDL2Q53FV1 153 aa13.65□□□□□ -0.22
CACNA1A-238ENST00000637276 ERG28Q9UKR5 140 aa13.65□□□□□ -0.22
CACNA1A-238ENST00000637276 CHKB-CPT1BH3BT56 60 aa13.65□□□□□ -0.22
CACNA1A-238ENST00000637276 ARFGEF1Q9Y6D6 1849 aa13.65□□□□□ -0.22
CACNA1A-238ENST00000637276 LRCOL1A6NCL2 159 aa13.65□□□□□ -0.22
CACNA1A-238ENST00000637276 GCM2O75603 506 aaPredicted RBP13.65□□□□□ -0.22
CACNA1A-238ENST00000637276 IGKCP01834 107 aa13.65□□□□□ -0.22
CACNA1A-238ENST00000637276 SRSF1Q07955 248 aaKnown RBP eCLIP13.65□□□□□ -0.22
CACNA1A-238ENST00000637276 TIMM23BQ5SRD1 257 aa13.65□□□□□ -0.22
CACNA1A-238ENST00000637276 GDF15Q99988 308 aa13.65□□□□□ -0.22
CACNA1A-238ENST00000637276 KLK9Q9UKQ9 250 aa13.65□□□□□ -0.22
CACNA1A-238ENST00000637276 KIF13BQ9NQT8 1826 aa13.64□□□□□ -0.23
CACNA1A-238ENST00000637276 CACNA1BQ00975 2339 aa13.64□□□□□ -0.23
CACNA1A-238ENST00000637276 DOCK3Q8IZD9 2030 aa13.64□□□□□ -0.23
CACNA1A-238ENST00000637276 COL11A1P12107 1806 aaPredicted RBP13.64□□□□□ -0.23
CACNA1A-238ENST00000637276 STRCQ7RTU9 1775 aa13.64□□□□□ -0.23
CACNA1A-238ENST00000637276 PAX9P55771 341 aa13.64□□□□□ -0.23
CACNA1A-238ENST00000637276 PLNP26678 52 aa13.64□□□□□ -0.23
CACNA1A-238ENST00000637276 C9orf106Q8NAJ2 232 aa13.64□□□□□ -0.23
CACNA1A-238ENST00000637276 SAA2-SAA4A0A096LPE2 208 aa13.64□□□□□ -0.23
CACNA1A-238ENST00000637276 ERVH48-1M5A8F1 160 aa13.64□□□□□ -0.23
CACNA1A-238ENST00000637276 SAA2P0DJI9 122 aaPredicted RBP13.64□□□□□ -0.23
CACNA1A-238ENST00000637276 RPL18AQ02543 176 aaKnown RBP13.64□□□□□ -0.23
CACNA1A-238ENST00000637276 FAM57AQ8TBR7 257 aa13.64□□□□□ -0.23
CACNA1A-238ENST00000637276 OR5P3Q8WZ94 311 aa13.64□□□□□ -0.23
CACNA1A-238ENST00000637276 DKK1O94907 266 aa13.64□□□□□ -0.23
CACNA1A-238ENST00000637276 RSPO3Q9BXY4 272 aaPredicted RBP13.64□□□□□ -0.23
CACNA1A-238ENST00000637276 TUBGCP6Q96RT7 1819 aa13.64□□□□□ -0.23
CACNA1A-238ENST00000637276 SRRM4A7MD48 611 aaKnown RBP13.63□□□□□ -0.23
CACNA1A-238ENST00000637276 COL22A1Q8NFW1 1626 aaPredicted RBP13.63□□□□□ -0.23
CACNA1A-238ENST00000637276 NBR2O15453 112 aa13.63□□□□□ -0.23
CACNA1A-238ENST00000637276 DPM2O94777 84 aa13.63□□□□□ -0.23
CACNA1A-238ENST00000637276 TBX6O95947 436 aaPredicted RBP13.63□□□□□ -0.23
CACNA1A-238ENST00000637276 PIP4P2Q8N4L2 257 aa13.63□□□□□ -0.23
CACNA1A-238ENST00000637276 H3BUX3 64 aa13.63□□□□□ -0.23
CACNA1A-238ENST00000637276 FAM166AQ6J272 317 aa13.63□□□□□ -0.23
CACNA1A-238ENST00000637276 SLC25A38Q96DW6 304 aa13.63□□□□□ -0.23
CACNA1A-238ENST00000637276 TCF20Q9UGU0 1960 aaKnown RBP13.63□□□□□ -0.23
CACNA1A-238ENST00000637276 WNT2P09544 360 aa13.63□□□□□ -0.23
CACNA1A-238ENST00000637276 MYOD1P15172 320 aa13.63□□□□□ -0.23
CACNA1A-238ENST00000637276 DAD1P61803 113 aa13.63□□□□□ -0.23
CACNA1A-238ENST00000637276 SPATA25Q9BR10 227 aa13.63□□□□□ -0.23
CACNA1A-238ENST00000637276 CNOT1A5YKK6 2376 aaKnown RBP13.63□□□□□ -0.23
CACNA1A-238ENST00000637276 HIST1H2BAQ96A08 127 aa13.63□□□□□ -0.23
CACNA1A-238ENST00000637276 Q96MF0 132 aa13.63□□□□□ -0.23
CACNA1A-238ENST00000637276 SYNJ2BPP57105 145 aa13.62□□□□□ -0.23
CACNA1A-238ENST00000637276 HAMPP81172 84 aa13.62□□□□□ -0.23
CACNA1A-238ENST00000637276 GAGE6Q13070 117 aa13.62□□□□□ -0.23
CACNA1A-238ENST00000637276 MRPL32Q9BYC8 188 aaKnown RBP13.62□□□□□ -0.23
CACNA1A-238ENST00000637276 C2orf82Q6UX34 121 aa13.62□□□□□ -0.23
CACNA1A-238ENST00000637276 TINCRA0A1B0GVN0 87 aa13.62□□□□□ -0.23
CACNA1A-238ENST00000637276 SERF1AO75920 110 aa13.62□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms