RNA–Protein interactions for RNA: ENST00000636183.1

CLN5-208, Transcript of CLN5, intracellular trafficking protein, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CLN5, Length 6,664 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN5-208ENST00000636183 C1orf159Q96HA4 380 aa13.33□□□□□ -0.28
CLN5-208ENST00000636183 YPEL2Q96QA6 119 aa13.33□□□□□ -0.28
CLN5-208ENST00000636183 NRN1Q9NPD7 142 aa13.33□□□□□ -0.28
CLN5-208ENST00000636183 DKK4Q9UBT3 224 aa13.33□□□□□ -0.28
CLN5-208ENST00000636183 TRAV9-2A0A087WT02 112 aa13.33□□□□□ -0.28
CLN5-208ENST00000636183 MSMBP08118 114 aa13.33□□□□□ -0.28
CLN5-208ENST00000636183 TMEM126AQ9H061 195 aa13.33□□□□□ -0.28
CLN5-208ENST00000636183 ZNF257Q9Y2Q1 563 aa13.33□□□□□ -0.28
CLN5-208ENST00000636183 UCP3P55916 312 aa13.32□□□□□ -0.28
CLN5-208ENST00000636183 TMEM178BH3BS89 294 aa13.32□□□□□ -0.28
CLN5-208ENST00000636183 CXCL2P19875 107 aa13.32□□□□□ -0.28
CLN5-208ENST00000636183 EIF4EBP2Q13542 120 aaPredicted RBP13.32□□□□□ -0.28
CLN5-208ENST00000636183 ZNF474Q6S9Z5 364 aaPredicted RBP13.32□□□□□ -0.28
CLN5-208ENST00000636183 CA1P00915 261 aaPredicted RBP13.32□□□□□ -0.28
CLN5-208ENST00000636183 PKIAP61925 76 aa13.32□□□□□ -0.28
CLN5-208ENST00000636183 ORMDL3Q8N138 153 aa13.32□□□□□ -0.28
CLN5-208ENST00000636183 MBNL3Q9NUK0 354 aaKnown RBP13.32□□□□□ -0.28
CLN5-208ENST00000636183 PQLC2LA1A4F0 135 aa13.32□□□□□ -0.28
CLN5-208ENST00000636183 C22orf46C9J442 243 aa13.32□□□□□ -0.28
CLN5-208ENST00000636183 SPSB3Q6PJ21 355 aa13.32□□□□□ -0.28
CLN5-208ENST00000636183 CACNG8Q8WXS5 425 aa13.32□□□□□ -0.28
CLN5-208ENST00000636183 PYYP10082 97 aa13.32□□□□□ -0.28
CLN5-208ENST00000636183 ZNF876PQ49A33 203 aa13.32□□□□□ -0.28
CLN5-208ENST00000636183 HAPLN4Q86UW8 402 aa13.32□□□□□ -0.28
CLN5-208ENST00000636183 WBP1Q96G27 269 aa13.32□□□□□ -0.28
CLN5-208ENST00000636183 SRRM4A7MD48 611 aaKnown RBP13.32□□□□□ -0.28
CLN5-208ENST00000636183 TMEM14DPA8MWL7 114 aa13.32□□□□□ -0.28
CLN5-208ENST00000636183 SUMO4Q6EEV6 95 aa13.32□□□□□ -0.28
CLN5-208ENST00000636183 ATP5G3P48201 142 aa13.31□□□□□ -0.28
CLN5-208ENST00000636183 ST6GALNAC6Q969X2 333 aa13.31□□□□□ -0.28
CLN5-208ENST00000636183 RAMP3O60896 148 aa13.31□□□□□ -0.28
CLN5-208ENST00000636183 ALX4Q9H161 411 aaPredicted RBP13.31□□□□□ -0.28
CLN5-208ENST00000636183 IGHV1-8P0DP01 117 aa13.31□□□□□ -0.28
CLN5-208ENST00000636183 DEFB131AP59861 70 aa13.31□□□□□ -0.28
CLN5-208ENST00000636183 COL6A6A6NMZ7 2263 aa13.31□□□□□ -0.28
CLN5-208ENST00000636183 C15orf61A6NNL5 157 aa13.31□□□□□ -0.28
CLN5-208ENST00000636183 IGHV1-3A0A0C4DH29 117 aa13.31□□□□□ -0.28
CLN5-208ENST00000636183 GGTLC3B5MD39 225 aa13.31□□□□□ -0.28
CLN5-208ENST00000636183 PIN1P1O15428 100 aa13.31□□□□□ -0.28
CLN5-208ENST00000636183 STPG2Q8N412 459 aa13.3□□□□□ -0.28
CLN5-208ENST00000636183 SDHCQ99643 169 aaPredicted RBP13.3□□□□□ -0.28
CLN5-208ENST00000636183 THSD7AQ9UPZ6 1657 aa13.3□□□□□ -0.28
CLN5-208ENST00000636183 NPIPB13A6NJU9 1138 aa13.3□□□□□ -0.28
CLN5-208ENST00000636183 NPIPB5A8MRT5 1133 aa13.3□□□□□ -0.28
CLN5-208ENST00000636183 K7ENP7 123 aa13.3□□□□□ -0.28
CLN5-208ENST00000636183 TOMM40O96008 361 aa13.3□□□□□ -0.28
CLN5-208ENST00000636183 TMEM249Q2WGJ8 235 aa13.3□□□□□ -0.28
CLN5-208ENST00000636183 KLF17Q5JT82 389 aaPredicted RBP13.3□□□□□ -0.28
CLN5-208ENST00000636183 PLSCR4Q9NRQ2 329 aa13.3□□□□□ -0.28
CLN5-208ENST00000636183 TRAV13-1A0A0B4J241 112 aa13.3□□□□□ -0.28
CLN5-208ENST00000636183 SLC25A38Q96DW6 304 aa13.3□□□□□ -0.28
CLN5-208ENST00000636183 CYSLTR1Q9Y271 337 aa13.3□□□□□ -0.28
CLN5-208ENST00000636183 APOC4P55056 127 aa13.3□□□□□ -0.28
CLN5-208ENST00000636183 SS18Q15532 418 aa13.3□□□□□ -0.28
CLN5-208ENST00000636183 PRDM13Q9H4Q3 707 aa13.3□□□□□ -0.28
CLN5-208ENST00000636183 UCP1P25874 307 aa13.3□□□□□ -0.28
CLN5-208ENST00000636183 SAA4P35542 130 aa13.3□□□□□ -0.28
CLN5-208ENST00000636183 LINC01590Q5TEZ4 76 aa13.3□□□□□ -0.28
CLN5-208ENST00000636183 GGACTQ9BVM4 153 aa13.3□□□□□ -0.28
CLN5-208ENST00000636183 MINOS1Q5TGZ0 78 aa13.29□□□□□ -0.28
CLN5-208ENST00000636183 IMMP2LQ96T52 175 aa13.29□□□□□ -0.28
CLN5-208ENST00000636183 SMDT1Q9H4I9 107 aa13.29□□□□□ -0.28
CLN5-208ENST00000636183 MINOS1-NBL1R4GNA1 71 aa13.29□□□□□ -0.28
CLN5-208ENST00000636183 ZNF646O15015 1829 aaPredicted RBP13.29□□□□□ -0.28
CLN5-208ENST00000636183 TAF1LQ8IZX4 1826 aa13.29□□□□□ -0.28
CLN5-208ENST00000636183 ERCC8Q13216 396 aa13.29□□□□□ -0.28
CLN5-208ENST00000636183 OR2K2Q8NGT1 345 aa13.29□□□□□ -0.28
CLN5-208ENST00000636183 A6NNC1 897 aa13.29□□□□□ -0.28
CLN5-208ENST00000636183 HOXD3P31249 432 aaPredicted RBP13.29□□□□□ -0.28
CLN5-208ENST00000636183 SRSF1Q07955 248 aaKnown RBP eCLIP13.29□□□□□ -0.28
CLN5-208ENST00000636183 LINC00614P0C842 121 aa13.29□□□□□ -0.28
CLN5-208ENST00000636183 PEF1Q9UBV8 284 aaKnown RBP13.29□□□□□ -0.28
CLN5-208ENST00000636183 SSBP2P81877 361 aaPredicted RBP13.29□□□□□ -0.28
CLN5-208ENST00000636183 C10orf55Q5SWW7 151 aa13.29□□□□□ -0.28
CLN5-208ENST00000636183 TMEM256Q8N2U0 113 aa13.29□□□□□ -0.28
CLN5-208ENST00000636183 PSG8Q9UQ74 426 aa13.29□□□□□ -0.28
CLN5-208ENST00000636183 COL11A2P13942 1736 aaPredicted RBP13.29□□□□□ -0.28
CLN5-208ENST00000636183 HIGD1CA8MV81 97 aa13.28□□□□□ -0.28
CLN5-208ENST00000636183 PSG1P11464 419 aa13.28□□□□□ -0.28
CLN5-208ENST00000636183 FGFBP3Q8TAT2 258 aa13.28□□□□□ -0.28
CLN5-208ENST00000636183 TRAF4Q9BUZ4 470 aaPredicted RBP13.28□□□□□ -0.28
CLN5-208ENST00000636183 TRBV9A0A0B4J1U6 114 aa13.28□□□□□ -0.28
CLN5-208ENST00000636183 TNFSF13O75888 250 aa13.28□□□□□ -0.28
CLN5-208ENST00000636183 CCL1P22362 96 aa13.28□□□□□ -0.28
CLN5-208ENST00000636183 UQCR10Q9UDW1 63 aa13.28□□□□□ -0.28
CLN5-208ENST00000636183 ZFC3H1O60293 1989 aaKnown RBP13.28□□□□□ -0.28
CLN5-208ENST00000636183 IFI6P09912 130 aa13.28□□□□□ -0.28
CLN5-208ENST00000636183 NKAPP1Q8N9T2 125 aa13.28□□□□□ -0.28
CLN5-208ENST00000636183 ZNF625Q96I27 306 aaPredicted RBP13.28□□□□□ -0.28
CLN5-208ENST00000636183 MCRIP2Q9BUT9 160 aaKnown RBP13.28□□□□□ -0.28
CLN5-208ENST00000636183 TRBV7-1A0A0A6YYK4 115 aa13.28□□□□□ -0.28
CLN5-208ENST00000636183 LINC01619G3V211 115 aa13.28□□□□□ -0.28
CLN5-208ENST00000636183 FOXG1P55316 489 aaPredicted RBP13.28□□□□□ -0.28
CLN5-208ENST00000636183 IGHV3-16A0A0C4DH30 117 aa13.27□□□□□ -0.28
CLN5-208ENST00000636183 IGFL4Q6B9Z1 124 aa13.27□□□□□ -0.28
CLN5-208ENST00000636183 COQ2Q96H96 371 aa13.27□□□□□ -0.28
CLN5-208ENST00000636183 PMCHL2Q9BQD1 86 aa13.27□□□□□ -0.28
CLN5-208ENST00000636183 RALGAPA1Q6GYQ0 2036 aa13.27□□□□□ -0.28
CLN5-208ENST00000636183 ZNF497Q6ZNH5 498 aa13.27□□□□□ -0.28
CLN5-208ENST00000636183 SLC25A2Q9BXI2 301 aa13.27□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 65.5 ms