RNA–Protein interactions for RNA: ENST00000611869.4

TCF3-220, Transcript of transcription factor 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TCF3, Length 4,409 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF3-220ENST00000611869 PAFAH1B2P68402 229 aa10.74□□□□□ -0.69
TCF3-220ENST00000611869 C17orf58Q2M2W7 97 aa10.74□□□□□ -0.69
TCF3-220ENST00000611869 SPRNQ5BIV9 151 aa10.74□□□□□ -0.69
TCF3-220ENST00000611869 METTL26Q96S19 204 aa10.74□□□□□ -0.69
TCF3-220ENST00000611869 CCL19Q99731 98 aa10.74□□□□□ -0.69
TCF3-220ENST00000611869 F5H697 171 aa10.74□□□□□ -0.69
TCF3-220ENST00000611869 GPR183P32249 361 aa10.74□□□□□ -0.69
TCF3-220ENST00000611869 FOXA3P55318 350 aaPredicted RBP10.74□□□□□ -0.69
TCF3-220ENST00000611869 PRSS8Q16651 343 aa10.74□□□□□ -0.69
TCF3-220ENST00000611869 FAM90A2PQ658T7 463 aa10.74□□□□□ -0.69
TCF3-220ENST00000611869 Q6ZN92 141 aa10.74□□□□□ -0.69
TCF3-220ENST00000611869 HAPLN4Q86UW8 402 aa10.74□□□□□ -0.69
TCF3-220ENST00000611869 C1QL4Q86Z23 238 aa10.74□□□□□ -0.69
TCF3-220ENST00000611869 NEU1Q99519 415 aa10.74□□□□□ -0.69
TCF3-220ENST00000611869 LRP4O75096 1905 aa10.74□□□□□ -0.69
TCF3-220ENST00000611869 IGHV1-3A0A0C4DH29 117 aa10.74□□□□□ -0.69
TCF3-220ENST00000611869 TMEM167AQ8TBQ9 72 aa10.74□□□□□ -0.69
TCF3-220ENST00000611869 C16orf92Q96LL3 132 aa10.74□□□□□ -0.69
TCF3-220ENST00000611869 BMI1P35226 326 aa10.73□□□□□ -0.69
TCF3-220ENST00000611869 TFPI2P48307 235 aa10.73□□□□□ -0.69
TCF3-220ENST00000611869 CSPG4Q6UVK1 2322 aa10.73□□□□□ -0.69
TCF3-220ENST00000611869 TEX38Q6PEX7 206 aa10.73□□□□□ -0.69
TCF3-220ENST00000611869 DPF1Q92782 380 aa10.73□□□□□ -0.69
TCF3-220ENST00000611869 GSX1Q9H4S2 264 aaPredicted RBP10.73□□□□□ -0.69
TCF3-220ENST00000611869 COX6B1P14854 86 aa10.73□□□□□ -0.69
TCF3-220ENST00000611869 MAS1LP35410 378 aa10.73□□□□□ -0.69
TCF3-220ENST00000611869 CFHR2P36980 270 aa10.73□□□□□ -0.69
TCF3-220ENST00000611869 TMEM78Q5T7P6 136 aa10.73□□□□□ -0.69
TCF3-220ENST00000611869 GFI1BQ5VTD9 330 aa10.73□□□□□ -0.69
TCF3-220ENST00000611869 TNFRSF14Q92956 283 aa10.73□□□□□ -0.69
TCF3-220ENST00000611869 Q9H3A6 140 aa10.73□□□□□ -0.69
TCF3-220ENST00000611869 GCGP01275 180 aa10.72□□□□□ -0.69
TCF3-220ENST00000611869 NBL1P41271 181 aa10.72□□□□□ -0.69
TCF3-220ENST00000611869 KLF17Q5JT82 389 aaPredicted RBP10.72□□□□□ -0.69
TCF3-220ENST00000611869 CRIP3Q6Q6R5 217 aa10.72□□□□□ -0.69
TCF3-220ENST00000611869 LINC01551Q86U37 167 aa10.72□□□□□ -0.69
TCF3-220ENST00000611869 TNCP24821 2201 aa10.72□□□□□ -0.69
TCF3-220ENST00000611869 A0A1W2PRE2 83 aa10.72□□□□□ -0.69
TCF3-220ENST00000611869 CA1P00915 261 aaPredicted RBP10.72□□□□□ -0.69
TCF3-220ENST00000611869 HTN1P15515 57 aa10.72□□□□□ -0.69
TCF3-220ENST00000611869 ZNF726P1Q15940 193 aa10.72□□□□□ -0.69
TCF3-220ENST00000611869 TMEM191AQ9H0A3 160 aa10.72□□□□□ -0.69
TCF3-220ENST00000611869 OR2T8A6NH00 312 aa10.72□□□□□ -0.69
TCF3-220ENST00000611869 M0R143 59 aa10.72□□□□□ -0.69
TCF3-220ENST00000611869 TWIST1Q15672 202 aa10.72□□□□□ -0.69
TCF3-220ENST00000611869 OR8A1Q8NGG7 326 aa10.72□□□□□ -0.69
TCF3-220ENST00000611869 FAM168AQ92567 244 aa10.72□□□□□ -0.69
TCF3-220ENST00000611869 PRRC2CQ9Y520 2896 aaKnown RBP10.71□□□□□ -0.69
TCF3-220ENST00000611869 RNASE2P10153 161 aaKnown RBP10.71□□□□□ -0.69
TCF3-220ENST00000611869 RELQ04864 619 aaPredicted RBP10.71□□□□□ -0.69
TCF3-220ENST00000611869 TRBV24-1A0A075B6N3 115 aa10.71□□□□□ -0.69
TCF3-220ENST00000611869 PRSS1P07477 247 aa10.71□□□□□ -0.69
TCF3-220ENST00000611869 AREGP15514 252 aa10.71□□□□□ -0.69
TCF3-220ENST00000611869 C5orf52A6NGY3 159 aa10.71□□□□□ -0.7
TCF3-220ENST00000611869 TAS2R60P59551 318 aa10.71□□□□□ -0.7
TCF3-220ENST00000611869 ATP5G2Q06055 141 aa10.71□□□□□ -0.7
TCF3-220ENST00000611869 SPANXN1Q5VSR9 72 aa10.71□□□□□ -0.7
TCF3-220ENST00000611869 ZNF738Q8NE65 137 aa10.71□□□□□ -0.7
TCF3-220ENST00000611869 MAP1LC3CQ9BXW4 147 aa10.71□□□□□ -0.7
TCF3-220ENST00000611869 MUC21A0A0G2JKD1 596 aa10.7□□□□□ -0.7
TCF3-220ENST00000611869 MUC21A0A140T8X8 626 aa10.7□□□□□ -0.7
TCF3-220ENST00000611869 MUC21Q5SSG8 566 aa10.7□□□□□ -0.7
TCF3-220ENST00000611869 SEM1Q6ZVN7 128 aa10.7□□□□□ -0.7
TCF3-220ENST00000611869 GPR82Q96P67 336 aa10.7□□□□□ -0.7
TCF3-220ENST00000611869 YTHDF2Q9Y5A9 579 aaKnown RBP10.7□□□□□ -0.7
TCF3-220ENST00000611869 NUP210LQ5VU65 1888 aa10.7□□□□□ -0.7
TCF3-220ENST00000611869 ITGB1BP1O14713 200 aa10.7□□□□□ -0.7
TCF3-220ENST00000611869 HLA-DRB1P01911 266 aa10.7□□□□□ -0.7
TCF3-220ENST00000611869 FOLR2P14207 255 aa10.7□□□□□ -0.7
TCF3-220ENST00000611869 NPPCP23582 126 aa10.7□□□□□ -0.7
TCF3-220ENST00000611869 TRGV3P03979 118 aa10.7□□□□□ -0.7
TCF3-220ENST00000611869 VAMP3Q15836 100 aa10.7□□□□□ -0.7
TCF3-220ENST00000611869 Q8TCH9 128 aa10.7□□□□□ -0.7
TCF3-220ENST00000611869 RNF125Q96EQ8 232 aa10.7□□□□□ -0.7
TCF3-220ENST00000611869 CEACAM4O75871 244 aa10.7□□□□□ -0.7
TCF3-220ENST00000611869 TCTAP57738 103 aa10.7□□□□□ -0.7
TCF3-220ENST00000611869 ST6GALNAC3Q8NDV1 305 aa10.7□□□□□ -0.7
TCF3-220ENST00000611869 C7orf69Q9H7B7 122 aa10.7□□□□□ -0.7
TCF3-220ENST00000611869 GSN-AS1Q9NRJ2 163 aa10.7□□□□□ -0.7
TCF3-220ENST00000611869 TMEM242Q9NWH2 141 aa10.7□□□□□ -0.7
TCF3-220ENST00000611869 PLA2G2EQ9NZK7 142 aa10.7□□□□□ -0.7
TCF3-220ENST00000611869 BUB1B-PAK6H3BSN5 160 aa10.69□□□□□ -0.7
TCF3-220ENST00000611869 UBE2CO00762 179 aa10.69□□□□□ -0.7
TCF3-220ENST00000611869 DDTP30046 118 aa10.69□□□□□ -0.7
TCF3-220ENST00000611869 CLEC19AQ6UXS0 136 aa10.69□□□□□ -0.7
TCF3-220ENST00000611869 TMEM14BQ9NUH8 114 aa10.69□□□□□ -0.7
TCF3-220ENST00000611869 EPDR1Q9UM22 224 aa10.69□□□□□ -0.7
TCF3-220ENST00000611869 SIGLEC9Q9Y336 463 aa10.69□□□□□ -0.7
TCF3-220ENST00000611869 TRBV9A0A0B4J1U6 114 aa10.69□□□□□ -0.7
TCF3-220ENST00000611869 HIGD1CA8MV81 97 aa10.69□□□□□ -0.7
TCF3-220ENST00000611869 GNLYP22749 145 aa10.69□□□□□ -0.7
TCF3-220ENST00000611869 VDAC2P45880 294 aaPredicted RBP10.69□□□□□ -0.7
TCF3-220ENST00000611869 DLX6P56179 175 aa10.69□□□□□ -0.7
TCF3-220ENST00000611869 PSG9Q00887 426 aa10.69□□□□□ -0.7
TCF3-220ENST00000611869 TMEM170AQ8WVE7 144 aa10.69□□□□□ -0.7
TCF3-220ENST00000611869 EEF1AKMT3Q96AZ1 226 aa10.69□□□□□ -0.7
TCF3-220ENST00000611869 PARD6GQ9BYG4 376 aaPredicted RBP10.69□□□□□ -0.7
TCF3-220ENST00000611869 LINC00527Q9UJ94 153 aa10.69□□□□□ -0.7
TCF3-220ENST00000611869 PSG1P11464 419 aa10.69□□□□□ -0.7
TCF3-220ENST00000611869 C3orf36Q3SXR2 165 aa10.69□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms