RNA–Protein interactions for RNA: ENST00000599044.1

CCDC61-207, Transcript of coiled-coil domain containing 61, humanhuman

TSL 2

Gene CCDC61, Length 849 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC61-207ENST00000599044 MAP6D1Q9H9H5 199 aa16.9■□□□□ 0.3
CCDC61-207ENST00000599044 MRPL36Q9P0J6 103 aaKnown RBP16.9■□□□□ 0.3
CCDC61-207ENST00000599044 TP53TG1Q9Y2A0 90 aa16.9■□□□□ 0.3
CCDC61-207ENST00000599044 INS-IGF2F8WCM5 200 aa16.89■□□□□ 0.29
CCDC61-207ENST00000599044 ATG12O94817 140 aa16.89■□□□□ 0.29
CCDC61-207ENST00000599044 IFNA17P01571 189 aa16.89■□□□□ 0.29
CCDC61-207ENST00000599044 RNASE2P10153 161 aaKnown RBP16.89■□□□□ 0.29
CCDC61-207ENST00000599044 SRPXP78539 464 aa16.89■□□□□ 0.29
CCDC61-207ENST00000599044 GPR146Q96CH1 333 aa16.89■□□□□ 0.29
CCDC61-207ENST00000599044 RNF183Q96D59 192 aa16.89■□□□□ 0.29
CCDC61-207ENST00000599044 IGHV3-66A0A0C4DH42 116 aa16.88■□□□□ 0.29
CCDC61-207ENST00000599044 KIR2DL5BA0A0G2JN68 375 aa16.88■□□□□ 0.29
CCDC61-207ENST00000599044 KIR2DL5BA0A0G2JPC4 375 aa16.88■□□□□ 0.29
CCDC61-207ENST00000599044 UBE2CO00762 179 aa16.88■□□□□ 0.29
CCDC61-207ENST00000599044 TMEM50AO95807 157 aa16.88■□□□□ 0.29
CCDC61-207ENST00000599044 BMI1P35226 326 aa16.88■□□□□ 0.29
CCDC61-207ENST00000599044 SNCAP37840 140 aa16.88■□□□□ 0.29
CCDC61-207ENST00000599044 PMS2P11Q13670 270 aa16.88■□□□□ 0.29
CCDC61-207ENST00000599044 KIR2DL5AQ8N109 375 aa16.88■□□□□ 0.29
CCDC61-207ENST00000599044 STPG3Q8N7X2 389 aa16.88■□□□□ 0.29
CCDC61-207ENST00000599044 LRTM2Q8N967 370 aa16.88■□□□□ 0.29
CCDC61-207ENST00000599044 KIR2DL5BQ8NHK3 375 aa16.88■□□□□ 0.29
CCDC61-207ENST00000599044 RNASE11Q8TAA1 199 aaKnown RBP16.88■□□□□ 0.29
CCDC61-207ENST00000599044 ST8SIA2Q92186 375 aa16.88■□□□□ 0.29
CCDC61-207ENST00000599044 RRNAD1Q96FB5 475 aaKnown RBP16.88■□□□□ 0.29
CCDC61-207ENST00000599044 MARVELD1Q9BSK0 173 aa16.88■□□□□ 0.29
CCDC61-207ENST00000599044 ZFAND3Q9H8U3 227 aa16.88■□□□□ 0.29
CCDC61-207ENST00000599044 A0A0B4J2A0 478 aa16.87■□□□□ 0.29
CCDC61-207ENST00000599044 A0A1B0GU03 582 aa16.87■□□□□ 0.29
CCDC61-207ENST00000599044 INMT-MINDY4F8WBC2 141 aa16.87■□□□□ 0.29
CCDC61-207ENST00000599044 PTTG1O95997 202 aa16.87■□□□□ 0.29
CCDC61-207ENST00000599044 TNFRSF9Q07011 255 aa16.87■□□□□ 0.29
CCDC61-207ENST00000599044 FNDC4Q9H6D8 234 aaPredicted RBP16.87■□□□□ 0.29
CCDC61-207ENST00000599044 SHPKQ9UHJ6 478 aa16.87■□□□□ 0.29
CCDC61-207ENST00000599044 PUS1Q9Y606 427 aaKnown RBP eCLIP16.87■□□□□ 0.29
CCDC61-207ENST00000599044 IL5P05113 134 aa16.86■□□□□ 0.29
CCDC61-207ENST00000599044 NPBWR1P48145 328 aa16.86■□□□□ 0.29
CCDC61-207ENST00000599044 NMSQ5H8A3 153 aa16.86■□□□□ 0.29
CCDC61-207ENST00000599044 TCF24Q7RTU0 167 aa16.86■□□□□ 0.29
CCDC61-207ENST00000599044 VSIRQ9H7M9 311 aa16.86■□□□□ 0.29
CCDC61-207ENST00000599044 HOXA1P49639 335 aaPredicted RBP16.85■□□□□ 0.29
CCDC61-207ENST00000599044 FAM219AQ8IW50 185 aa16.85■□□□□ 0.29
CCDC61-207ENST00000599044 COQ8AQ8NI60 647 aa16.85■□□□□ 0.29
CCDC61-207ENST00000599044 ZNF431Q8TF32 576 aaPredicted RBP16.85■□□□□ 0.29
CCDC61-207ENST00000599044 MITD1Q8WV92 249 aa16.85■□□□□ 0.29
CCDC61-207ENST00000599044 CACNG5Q9UF02 275 aa16.85■□□□□ 0.29
CCDC61-207ENST00000599044 CXorf65A6NEN9 183 aa16.84■□□□□ 0.29
CCDC61-207ENST00000599044 ADAP1O75689 374 aa16.84■□□□□ 0.29
CCDC61-207ENST00000599044 DFFBO76075 338 aa16.84■□□□□ 0.29
CCDC61-207ENST00000599044 HOXB5P09067 269 aa16.84■□□□□ 0.29
CCDC61-207ENST00000599044 ZNF600Q6ZNG1 722 aa16.84■□□□□ 0.29
CCDC61-207ENST00000599044 FAM24BQ8N5W8 94 aa16.84■□□□□ 0.29
CCDC61-207ENST00000599044 PDCD10Q9BUL8 212 aa16.84■□□□□ 0.29
CCDC61-207ENST00000599044 DUXBA0A1W2PPF3 345 aa16.83■□□□□ 0.28
CCDC61-207ENST00000599044 RGS21Q2M5E4 152 aa16.83■□□□□ 0.28
CCDC61-207ENST00000599044 BSXQ3C1V8 233 aa16.83■□□□□ 0.28
CCDC61-207ENST00000599044 GGNBP1Q5YKI7 109 aa16.83■□□□□ 0.28
CCDC61-207ENST00000599044 GINS3Q9BRX5 216 aa16.83■□□□□ 0.28
CCDC61-207ENST00000599044 MS4A6AQ9H2W1 248 aa16.83■□□□□ 0.28
CCDC61-207ENST00000599044 SUB1P53999 127 aaKnown RBP eCLIP16.82■□□□□ 0.28
CCDC61-207ENST00000599044 AARDQ4LEZ3 155 aa16.82■□□□□ 0.28
CCDC61-207ENST00000599044 CSTL1Q9H114 145 aa16.82■□□□□ 0.28
CCDC61-207ENST00000599044 CLN5O75503 358 aa16.81■□□□□ 0.28
CCDC61-207ENST00000599044 OPRK1P41145 380 aa16.81■□□□□ 0.28
CCDC61-207ENST00000599044 C12orf45Q8N5I9 185 aaPredicted RBP16.81■□□□□ 0.28
CCDC61-207ENST00000599044 ENY2Q9NPA8 101 aa16.81■□□□□ 0.28
CCDC61-207ENST00000599044 CTNNBIP1Q9NSA3 81 aaPredicted RBP16.81■□□□□ 0.28
CCDC61-207ENST00000599044 TMED3Q9Y3Q3 217 aa16.81■□□□□ 0.28
CCDC61-207ENST00000599044 PIGBOS1A0A0B4J2F0 54 aa16.8■□□□□ 0.28
CCDC61-207ENST00000599044 MPTX1A8MV57 137 aa16.8■□□□□ 0.28
CCDC61-207ENST00000599044 CORTO00230 105 aa16.8■□□□□ 0.28
CCDC61-207ENST00000599044 PRAF2O60831 178 aa16.8■□□□□ 0.28
CCDC61-207ENST00000599044 SULT1A3P0DMM9 295 aa16.8■□□□□ 0.28
CCDC61-207ENST00000599044 SULT1A4P0DMN0 295 aa16.8■□□□□ 0.28
CCDC61-207ENST00000599044 CMC4P56277 68 aaPredicted RBP16.8■□□□□ 0.28
CCDC61-207ENST00000599044 SPCS3P61009 180 aa16.8■□□□□ 0.28
CCDC61-207ENST00000599044 LEMD1Q68G75 181 aa16.8■□□□□ 0.28
CCDC61-207ENST00000599044 OR4X1Q8NH49 305 aa16.8■□□□□ 0.28
CCDC61-207ENST00000599044 LINC00476Q8WZB0 136 aa16.8■□□□□ 0.28
CCDC61-207ENST00000599044 NXPH3O95157 252 aa16.79■□□□□ 0.28
CCDC61-207ENST00000599044 IGKV1-17P01599 117 aa16.79■□□□□ 0.28
CCDC61-207ENST00000599044 RPL11P62913 178 aaKnown RBP16.79■□□□□ 0.28
CCDC61-207ENST00000599044 PAFAH1B2P68402 229 aa16.79■□□□□ 0.28
CCDC61-207ENST00000599044 SMCO1Q147U7 214 aa16.79■□□□□ 0.28
CCDC61-207ENST00000599044 OXA1LQ15070 435 aa16.79■□□□□ 0.28
CCDC61-207ENST00000599044 TIGITQ495A1 244 aa16.79■□□□□ 0.28
CCDC61-207ENST00000599044 CEMP1Q6PRD7 247 aaPredicted RBP16.79■□□□□ 0.28
CCDC61-207ENST00000599044 GPN1Q9HCN4 374 aaPredicted RBP16.79■□□□□ 0.28
CCDC61-207ENST00000599044 SNRPGP15A8MWD9 76 aa16.78■□□□□ 0.28
CCDC61-207ENST00000599044 CCSO14618 274 aa16.78■□□□□ 0.28
CCDC61-207ENST00000599044 PITX3O75364 302 aa16.78■□□□□ 0.28
CCDC61-207ENST00000599044 DEFB131AP59861 70 aa16.78■□□□□ 0.28
CCDC61-207ENST00000599044 OR52E5Q8NH55 327 aa16.78■□□□□ 0.28
CCDC61-207ENST00000599044 TMEM170AQ8WVE7 144 aa16.78■□□□□ 0.28
CCDC61-207ENST00000599044 DNASE2O00115 360 aaPredicted RBP16.77■□□□□ 0.28
CCDC61-207ENST00000599044 NPPCP23582 126 aa16.77■□□□□ 0.28
CCDC61-207ENST00000599044 NUPR2A6NF83 97 aa16.76■□□□□ 0.27
CCDC61-207ENST00000599044 LY6G6CO95867 125 aa16.76■□□□□ 0.27
CCDC61-207ENST00000599044 IFNA21P01568 189 aa16.76■□□□□ 0.27
CCDC61-207ENST00000599044 CD5P06127 495 aa16.76■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms