RNA–Protein interactions for RNA: ENST00000594346.1

FARP1-210, Transcript of FERM, ARH/RhoGEF and pleckstrin domain protein 1, humanhuman

Gene FARP1, Length 2,692 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FARP1-210ENST00000594346 DUX4L9Q6RFH8 374 aaPredicted RBP11.25□□□□□ -0.61
FARP1-210ENST00000594346 C9orf106Q8NAJ2 232 aa11.25□□□□□ -0.61
FARP1-210ENST00000594346 SNRNP40Q96DI7 357 aaKnown RBP11.25□□□□□ -0.61
FARP1-210ENST00000594346 MBD6Q96DN6 1003 aa11.25□□□□□ -0.61
FARP1-210ENST00000594346 PRNDQ9UKY0 176 aa11.25□□□□□ -0.61
FARP1-210ENST00000594346 SVEP1Q4LDE5 3571 aa11.25□□□□□ -0.61
FARP1-210ENST00000594346 TRAV5A0A0B4J249 113 aa11.25□□□□□ -0.61
FARP1-210ENST00000594346 SH2D7A6NKC9 451 aaPredicted RBP11.25□□□□□ -0.61
FARP1-210ENST00000594346 IGHV3-48P01763 117 aa11.25□□□□□ -0.61
FARP1-210ENST00000594346 PRB4P10163 310 aaPredicted RBP11.25□□□□□ -0.61
FARP1-210ENST00000594346 CD59P13987 128 aa11.25□□□□□ -0.61
FARP1-210ENST00000594346 SGK494Q96LW2 274 aa11.25□□□□□ -0.61
FARP1-210ENST00000594346 PLSCR4Q9NRQ2 329 aa11.25□□□□□ -0.61
FARP1-210ENST00000594346 POU2AF1Q16633 256 aa11.24□□□□□ -0.61
FARP1-210ENST00000594346 C17orf58Q2M2W7 97 aa11.24□□□□□ -0.61
FARP1-210ENST00000594346 FAM120AOSQ5T036 256 aa11.24□□□□□ -0.61
FARP1-210ENST00000594346 DHRS13Q6UX07 377 aa11.24□□□□□ -0.61
FARP1-210ENST00000594346 FAM231DQ6ZW35 169 aa11.24□□□□□ -0.61
FARP1-210ENST00000594346 C19orf24Q9BVV8 132 aa11.24□□□□□ -0.61
FARP1-210ENST00000594346 TMEM191AQ9H0A3 160 aa11.24□□□□□ -0.61
FARP1-210ENST00000594346 MEGF9Q9H1U4 602 aa11.24□□□□□ -0.61
FARP1-210ENST00000594346 C1RLQ9NZP8 487 aa11.24□□□□□ -0.61
FARP1-210ENST00000594346 PEF1Q9UBV8 284 aaKnown RBP11.24□□□□□ -0.61
FARP1-210ENST00000594346 DYSFO75923 2080 aa11.24□□□□□ -0.61
FARP1-210ENST00000594346 CEP250Q9BV73 2442 aa11.24□□□□□ -0.61
FARP1-210ENST00000594346 KBTBD11-OT1A0A1B0GTJ5 212 aa11.24□□□□□ -0.61
FARP1-210ENST00000594346 HIGD1CA8MV81 97 aa11.24□□□□□ -0.61
FARP1-210ENST00000594346 REG1BP48304 166 aa11.24□□□□□ -0.61
FARP1-210ENST00000594346 URB1-AS1Q96HZ7 61 aa11.24□□□□□ -0.61
FARP1-210ENST00000594346 ZNF257Q9Y2Q1 563 aa11.24□□□□□ -0.61
FARP1-210ENST00000594346 LEPROTL1O95214 131 aa11.23□□□□□ -0.61
FARP1-210ENST00000594346 MOGAT3Q86VF5 341 aa11.23□□□□□ -0.61
FARP1-210ENST00000594346 TANC2Q9HCD6 1990 aa11.23□□□□□ -0.61
FARP1-210ENST00000594346 TRAV8-6A0A0B4J262 113 aa11.23□□□□□ -0.61
FARP1-210ENST00000594346 IGHV1-24A0A0C4DH33 117 aa11.23□□□□□ -0.61
FARP1-210ENST00000594346 PRR33A8MZF0 331 aa11.23□□□□□ -0.61
FARP1-210ENST00000594346 C8orf88P0DMB2 117 aa11.23□□□□□ -0.61
FARP1-210ENST00000594346 ATP5IP56385 69 aaPredicted RBP11.23□□□□□ -0.61
FARP1-210ENST00000594346 PRCDQ00LT1 54 aa11.23□□□□□ -0.61
FARP1-210ENST00000594346 HES3Q5TGS1 186 aa11.23□□□□□ -0.61
FARP1-210ENST00000594346 CHRDL1Q9BU40 450 aa11.23□□□□□ -0.61
FARP1-210ENST00000594346 SCRT2Q9NQ03 307 aa11.23□□□□□ -0.61
FARP1-210ENST00000594346 ZNF71Q9NQZ8 489 aaPredicted RBP11.23□□□□□ -0.61
FARP1-210ENST00000594346 DSCAMO60469 2012 aa11.23□□□□□ -0.61
FARP1-210ENST00000594346 PLCE1Q9P212 2302 aa11.23□□□□□ -0.61
FARP1-210ENST00000594346 CORTO00230 105 aa11.22□□□□□ -0.61
FARP1-210ENST00000594346 TMEM11P17152 192 aa11.22□□□□□ -0.61
FARP1-210ENST00000594346 MSMPQ1L6U9 139 aa11.22□□□□□ -0.61
FARP1-210ENST00000594346 ZNF841Q6ZN19 808 aa11.22□□□□□ -0.61
FARP1-210ENST00000594346 LINC00173Q6ZV60 143 aa11.22□□□□□ -0.61
FARP1-210ENST00000594346 FAM169BQ8N8A8 192 aa11.22□□□□□ -0.61
FARP1-210ENST00000594346 AMMECR1Q9Y4X0 333 aaPredicted RBP11.22□□□□□ -0.61
FARP1-210ENST00000594346 CACNA1GO43497 2377 aa11.22□□□□□ -0.61
FARP1-210ENST00000594346 INTS1Q8N201 2190 aaKnown RBP11.22□□□□□ -0.61
FARP1-210ENST00000594346 A0A087X0K7 114 aa11.22□□□□□ -0.61
FARP1-210ENST00000594346 LHBP01229 141 aa11.22□□□□□ -0.61
FARP1-210ENST00000594346 RIPPLY3P57055 190 aa11.22□□□□□ -0.61
FARP1-210ENST00000594346 UBE2L3P68036 154 aaKnown RBP11.22□□□□□ -0.61
FARP1-210ENST00000594346 SSBP2P81877 361 aaPredicted RBP11.22□□□□□ -0.61
FARP1-210ENST00000594346 HIST1H1AQ02539 215 aaPredicted RBP11.22□□□□□ -0.61
FARP1-210ENST00000594346 ATP5L2Q7Z4Y8 100 aa11.22□□□□□ -0.61
FARP1-210ENST00000594346 CHCHD1Q96BP2 118 aaKnown RBP11.22□□□□□ -0.61
FARP1-210ENST00000594346 SARAFQ96BY9 339 aa11.22□□□□□ -0.61
FARP1-210ENST00000594346 SLC25A33Q9BSK2 321 aa11.22□□□□□ -0.61
FARP1-210ENST00000594346 UPK2O00526 184 aa11.22□□□□□ -0.61
FARP1-210ENST00000594346 HLA-DRB1P01911 266 aa11.22□□□□□ -0.61
FARP1-210ENST00000594346 HIST1H1EP10412 219 aaKnown RBP11.22□□□□□ -0.61
FARP1-210ENST00000594346 FOXA3P55318 350 aaPredicted RBP11.22□□□□□ -0.61
FARP1-210ENST00000594346 BHLHA15Q7RTS1 189 aaPredicted RBP11.22□□□□□ -0.61
FARP1-210ENST00000594346 OR9G1Q8NH87 305 aa11.22□□□□□ -0.61
FARP1-210ENST00000594346 IGLC1P0CG04 106 aa11.21□□□□□ -0.61
FARP1-210ENST00000594346 MCRIP2Q9BUT9 160 aaKnown RBP11.21□□□□□ -0.61
FARP1-210ENST00000594346 RPH3ALQ9UNE2 315 aa11.21□□□□□ -0.61
FARP1-210ENST00000594346 PROCRQ9UNN8 238 aa11.21□□□□□ -0.61
FARP1-210ENST00000594346 CHTOPQ9Y3Y2 248 aaKnown RBP11.21□□□□□ -0.61
FARP1-210ENST00000594346 GAGE10A6NGK3 116 aa11.21□□□□□ -0.62
FARP1-210ENST00000594346 SAP30O75446 220 aa11.21□□□□□ -0.62
FARP1-210ENST00000594346 GPR183P32249 361 aa11.21□□□□□ -0.62
FARP1-210ENST00000594346 C2orf83Q53S99 150 aa11.21□□□□□ -0.62
FARP1-210ENST00000594346 SSX8Q7RTT4 187 aa11.21□□□□□ -0.62
FARP1-210ENST00000594346 OR10W1Q8NGF6 305 aa11.21□□□□□ -0.62
FARP1-210ENST00000594346 MAP1LC3CQ9BXW4 147 aa11.21□□□□□ -0.62
FARP1-210ENST00000594346 SLC25A15Q9Y619 301 aa11.21□□□□□ -0.62
FARP1-210ENST00000594346 C7orf71A4D174 169 aa11.2□□□□□ -0.62
FARP1-210ENST00000594346 CIDEAO60543 219 aa11.2□□□□□ -0.62
FARP1-210ENST00000594346 HBBP68871 147 aa11.2□□□□□ -0.62
FARP1-210ENST00000594346 MS4A6AQ9H2W1 248 aa11.2□□□□□ -0.62
FARP1-210ENST00000594346 TEX50A0A1B0GTY4 177 aa11.2□□□□□ -0.62
FARP1-210ENST00000594346 A0A1B0GXF2 115 aa11.2□□□□□ -0.62
FARP1-210ENST00000594346 H0Y8G0 127 aa11.2□□□□□ -0.62
FARP1-210ENST00000594346 CDX4O14627 284 aaPredicted RBP11.2□□□□□ -0.62
FARP1-210ENST00000594346 SPRY3O43610 288 aa11.2□□□□□ -0.62
FARP1-210ENST00000594346 CCL11P51671 97 aa11.2□□□□□ -0.62
FARP1-210ENST00000594346 SRRM4A7MD48 611 aaKnown RBP11.19□□□□□ -0.62
FARP1-210ENST00000594346 VWC2LB2RUY7 222 aa11.19□□□□□ -0.62
FARP1-210ENST00000594346 PEX7O00628 323 aa11.19□□□□□ -0.62
FARP1-210ENST00000594346 OR1L8Q8NGR8 309 aa11.19□□□□□ -0.62
FARP1-210ENST00000594346 ITLN1Q8WWA0 313 aa11.19□□□□□ -0.62
FARP1-210ENST00000594346 ZC2HC1AQ96GY0 325 aa11.19□□□□□ -0.62
FARP1-210ENST00000594346 SLC25A2Q9BXI2 301 aa11.19□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms