RNA–Protein interactions for RNA: ENST00000594092.5

VRK3-207, Transcript of vaccinia related kinase 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VRK3, Length 1,831 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-207ENST00000594092 PRR20AP86496 221 aa11.91□□□□□ -0.5
VRK3-207ENST00000594092 C19orf54Q5BKX5 351 aa11.91□□□□□ -0.5
VRK3-207ENST00000594092 LINC00527Q9UJ94 153 aa11.91□□□□□ -0.5
VRK3-207ENST00000594092 BAHCC1Q9P281 2608 aa11.91□□□□□ -0.5
VRK3-207ENST00000594092 IGF1P05019 195 aa11.9□□□□□ -0.5
VRK3-207ENST00000594092 FGF8P55075 233 aaPredicted RBP11.9□□□□□ -0.5
VRK3-207ENST00000594092 GCSAMLQ5JQS6 135 aa11.9□□□□□ -0.5
VRK3-207ENST00000594092 TMEM116Q8NCL8 245 aa11.9□□□□□ -0.5
VRK3-207ENST00000594092 RAB24Q969Q5 203 aa11.9□□□□□ -0.5
VRK3-207ENST00000594092 TRAV41A0A0B4J266 112 aa11.9□□□□□ -0.5
VRK3-207ENST00000594092 RBFOX3A6NFN3 312 aa11.9□□□□□ -0.5
VRK3-207ENST00000594092 SEC14L6B5MCN3 397 aa11.9□□□□□ -0.5
VRK3-207ENST00000594092 CYP2G1PQ6ZSU1 146 aa11.9□□□□□ -0.5
VRK3-207ENST00000594092 THAP8Q8NA92 274 aa11.9□□□□□ -0.5
VRK3-207ENST00000594092 SCRT1Q9BWW7 348 aa11.9□□□□□ -0.5
VRK3-207ENST00000594092 SMDT1Q9H4I9 107 aa11.9□□□□□ -0.5
VRK3-207ENST00000594092 IGKV1D-37A0A075B6S9 117 aa11.89□□□□□ -0.51
VRK3-207ENST00000594092 ZFP92A6NM28 416 aa11.89□□□□□ -0.51
VRK3-207ENST00000594092 KLK9Q2XQG4 91 aa11.89□□□□□ -0.51
VRK3-207ENST00000594092 GNG13Q9P2W3 67 aa11.89□□□□□ -0.51
VRK3-207ENST00000594092 KLK9Q9UKQ9 250 aa11.89□□□□□ -0.51
VRK3-207ENST00000594092 TCRBV4S1A1TA0A5B7 111 aa11.88□□□□□ -0.51
VRK3-207ENST00000594092 F8W036 122 aa11.88□□□□□ -0.51
VRK3-207ENST00000594092 HMGB3O15347 200 aaKnown RBP11.88□□□□□ -0.51
VRK3-207ENST00000594092 IFNA1P01562 189 aa11.88□□□□□ -0.51
VRK3-207ENST00000594092 SFTA3P0C7M3 94 aa11.88□□□□□ -0.51
VRK3-207ENST00000594092 LINC00869P0C866 280 aa11.88□□□□□ -0.51
VRK3-207ENST00000594092 HAGHQ16775 308 aa11.88□□□□□ -0.51
VRK3-207ENST00000594092 CCDC28AQ8IWP9 274 aa11.88□□□□□ -0.51
VRK3-207ENST00000594092 TMEM86BQ8N661 226 aa11.88□□□□□ -0.51
VRK3-207ENST00000594092 NOL4LQ96MY1 436 aaPredicted RBP11.88□□□□□ -0.51
VRK3-207ENST00000594092 DUX5Q96PT3 197 aa11.88□□□□□ -0.51
VRK3-207ENST00000594092 THYN1Q9P016 225 aa11.88□□□□□ -0.51
VRK3-207ENST00000594092 AP4M1O00189 453 aa11.88□□□□□ -0.51
VRK3-207ENST00000594092 EIF3GO75821 320 aaKnown RBP eCLIP11.88□□□□□ -0.51
VRK3-207ENST00000594092 OR2J3O76001 311 aa11.88□□□□□ -0.51
VRK3-207ENST00000594092 NDUFB8O95169 186 aa11.88□□□□□ -0.51
VRK3-207ENST00000594092 HIST1H1BP16401 226 aaKnown RBP11.88□□□□□ -0.51
VRK3-207ENST00000594092 SELENOTP62341 195 aa11.88□□□□□ -0.51
VRK3-207ENST00000594092 RHOBP62745 196 aa11.88□□□□□ -0.51
VRK3-207ENST00000594092 RBMS3Q6XE24 437 aaKnown RBP11.88□□□□□ -0.51
VRK3-207ENST00000594092 OR4X1Q8NH49 305 aa11.88□□□□□ -0.51
VRK3-207ENST00000594092 RARRES2Q99969 163 aa11.88□□□□□ -0.51
VRK3-207ENST00000594092 ZNF355PQ9NSJ1 428 aa11.88□□□□□ -0.51
VRK3-207ENST00000594092 HIVEP2P31629 2446 aa11.87□□□□□ -0.51
VRK3-207ENST00000594092 TRBV9A0A0B4J1U6 114 aa11.87□□□□□ -0.51
VRK3-207ENST00000594092 C9JQL5 133 aa11.87□□□□□ -0.51
VRK3-207ENST00000594092 APOC3P02656 99 aa11.87□□□□□ -0.51
VRK3-207ENST00000594092 CD99P14209 185 aa11.87□□□□□ -0.51
VRK3-207ENST00000594092 GATA2P23769 480 aaPredicted RBP11.87□□□□□ -0.51
VRK3-207ENST00000594092 PPT1P50897 306 aa11.87□□□□□ -0.51
VRK3-207ENST00000594092 DEFA5Q01523 94 aa11.87□□□□□ -0.51
VRK3-207ENST00000594092 ZNF506Q5JVG8 444 aa11.87□□□□□ -0.51
VRK3-207ENST00000594092 TRGV9Q99603 122 aa11.87□□□□□ -0.51
VRK3-207ENST00000594092 C19orf24Q9BVV8 132 aa11.87□□□□□ -0.51
VRK3-207ENST00000594092 SEC11CQ9BY50 192 aa11.87□□□□□ -0.51
VRK3-207ENST00000594092 FBXL7Q9UJT9 491 aa11.87□□□□□ -0.51
VRK3-207ENST00000594092 MTORP42345 2549 aa11.87□□□□□ -0.51
VRK3-207ENST00000594092 LOC102723971A0A1B0GUV8 181 aa11.86□□□□□ -0.51
VRK3-207ENST00000594092 FOSL1P15407 271 aa11.86□□□□□ -0.51
VRK3-207ENST00000594092 ADCYAP1P18509 176 aa11.86□□□□□ -0.51
VRK3-207ENST00000594092 PMS2P11Q13670 270 aa11.86□□□□□ -0.51
VRK3-207ENST00000594092 KHDC3LQ587J8 217 aa11.86□□□□□ -0.51
VRK3-207ENST00000594092 GSX1Q9H4S2 264 aaPredicted RBP11.86□□□□□ -0.51
VRK3-207ENST00000594092 ZNF580Q9UK33 172 aa11.86□□□□□ -0.51
VRK3-207ENST00000594092 S4R3C0 116 aa11.86□□□□□ -0.51
VRK3-207ENST00000594092 BCL2P10415 239 aa11.86□□□□□ -0.51
VRK3-207ENST00000594092 PPIFP30405 207 aaKnown RBP11.86□□□□□ -0.51
VRK3-207ENST00000594092 RHOGP84095 191 aa11.86□□□□□ -0.51
VRK3-207ENST00000594092 ZNF90Q03938 601 aa11.86□□□□□ -0.51
VRK3-207ENST00000594092 SCGB2A2Q13296 93 aa11.86□□□□□ -0.51
VRK3-207ENST00000594092 ICAM4Q14773 271 aa11.86□□□□□ -0.51
VRK3-207ENST00000594092 TMEM95Q3KNT9 176 aa11.86□□□□□ -0.51
VRK3-207ENST00000594092 C10orf91Q5T1B1 145 aa11.86□□□□□ -0.51
VRK3-207ENST00000594092 IQCF2Q8IXL9 164 aa11.86□□□□□ -0.51
VRK3-207ENST00000594092 PRSS22Q9GZN4 317 aa11.86□□□□□ -0.51
VRK3-207ENST00000594092 NPFFR1Q9GZQ6 430 aa11.86□□□□□ -0.51
VRK3-207ENST00000594092 SLC35B3Q9H1N7 401 aa11.86□□□□□ -0.51
VRK3-207ENST00000594092 HIVEP1P15822 2718 aa11.85□□□□□ -0.51
VRK3-207ENST00000594092 DNAJC9-AS1A6NH13 148 aa11.85□□□□□ -0.51
VRK3-207ENST00000594092 CLN5O75503 358 aa11.85□□□□□ -0.51
VRK3-207ENST00000594092 HSPB1P04792 205 aaKnown RBP11.85□□□□□ -0.51
VRK3-207ENST00000594092 IGLC1P0CG04 106 aa11.85□□□□□ -0.51
VRK3-207ENST00000594092 STAG3L2P0CL84 134 aa11.85□□□□□ -0.51
VRK3-207ENST00000594092 STAG3L3P0CL85 134 aa11.85□□□□□ -0.51
VRK3-207ENST00000594092 SRD5A1P18405 259 aa11.85□□□□□ -0.51
VRK3-207ENST00000594092 FAM78BQ5VT40 261 aa11.85□□□□□ -0.51
VRK3-207ENST00000594092 RXFP4Q8TDU9 374 aa11.85□□□□□ -0.51
VRK3-207ENST00000594092 MS4A10Q96PG2 267 aa11.85□□□□□ -0.51
VRK3-207ENST00000594092 ZNF702PQ9H963 129 aa11.85□□□□□ -0.51
VRK3-207ENST00000594092 SEPSECSQ9HD40 501 aaKnown RBP11.85□□□□□ -0.51
VRK3-207ENST00000594092 MANBALQ9NQG1 85 aa11.85□□□□□ -0.51
VRK3-207ENST00000594092 CDC42EP3Q9UKI2 254 aa11.85□□□□□ -0.51
VRK3-207ENST00000594092 CARHSP1Q9Y2V2 147 aaKnown RBP11.85□□□□□ -0.51
VRK3-207ENST00000594092 F8W735 103 aaPredicted RBP11.84□□□□□ -0.51
VRK3-207ENST00000594092 CXorf1O96002 111 aa11.84□□□□□ -0.51
VRK3-207ENST00000594092 TAGLN2P37802 199 aaKnown RBP11.84□□□□□ -0.51
VRK3-207ENST00000594092 PSMB3P49720 205 aa11.84□□□□□ -0.51
VRK3-207ENST00000594092 MFAP4P55083 255 aa11.84□□□□□ -0.51
VRK3-207ENST00000594092 C15orf32Q32M92 178 aa11.84□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms