RNA–Protein interactions for RNA: ENST00000592790.1

VMP1-216, Transcript of vacuole membrane protein 1, human

Gene VMP1, Length 4,325 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
VMP1-216	ENST00000592790	DERL1	Q9BUN8	251 aa		2.92	□□□□□ -1.94
VMP1-216	ENST00000592790	TMEM14B	Q9NUH8	114 aa		2.92	□□□□□ -1.94
VMP1-216	ENST00000592790		V9GYV3	84 aa		2.92	□□□□□ -1.94
VMP1-216	ENST00000592790	COL6A6	A6NMZ7	2263 aa		2.92	□□□□□ -1.94
VMP1-216	ENST00000592790	CPAMD8	Q8IZJ3	1885 aa		2.92	□□□□□ -1.94
VMP1-216	ENST00000592790	PLCE1	Q9P212	2302 aa		2.92	□□□□□ -1.94
VMP1-216	ENST00000592790	IGHV2OR16-5	A0A0B4J2B6	119 aa		2.92	□□□□□ -1.94
VMP1-216	ENST00000592790	WNT9B	O14905	357 aa		2.92	□□□□□ -1.94
VMP1-216	ENST00000592790	PSPN	O60542	156 aa		2.92	□□□□□ -1.94
VMP1-216	ENST00000592790	AGFG2	O95081	481 aa		2.92	□□□□□ -1.94
VMP1-216	ENST00000592790	ORM1	P02763	201 aa		2.92	□□□□□ -1.94
VMP1-216	ENST00000592790	CECR9	P0C854	216 aa		2.92	□□□□□ -1.94
VMP1-216	ENST00000592790	CCDC144NL	Q6NUI1	221 aa		2.92	□□□□□ -1.94
VMP1-216	ENST00000592790	CRIP3	Q6Q6R5	217 aa		2.92	□□□□□ -1.94
VMP1-216	ENST00000592790	LYPD1	Q8N2G4	141 aa		2.92	□□□□□ -1.94
VMP1-216	ENST00000592790	TEX45	Q8NA69	505 aa		2.92	□□□□□ -1.94
VMP1-216	ENST00000592790	OR5AN1	Q8NGI8	311 aa		2.92	□□□□□ -1.94
VMP1-216	ENST00000592790	MYOZ3	Q8TDC0	251 aa		2.92	□□□□□ -1.94
VMP1-216	ENST00000592790	NPIPB3	Q92617	1050 aa		2.92	□□□□□ -1.94
VMP1-216	ENST00000592790	COQ2	Q96H96	371 aa		2.92	□□□□□ -1.94
VMP1-216	ENST00000592790	TRGV9	Q99603	122 aa		2.92	□□□□□ -1.94
VMP1-216	ENST00000592790	FZR1	Q9UM11	496 aa		2.92	□□□□□ -1.94
VMP1-216	ENST00000592790	ZNF318	Q5VUA4	2279 aa		2.91	□□□□□ -1.94
VMP1-216	ENST00000592790	IGHV2-26	A0A0B4J1V2	119 aa		2.91	□□□□□ -1.94
VMP1-216	ENST00000592790	PGPEP1L	A6NFU8	196 aa		2.91	□□□□□ -1.94
VMP1-216	ENST00000592790	LINC01549	A6NIU2	74 aa		2.91	□□□□□ -1.94
VMP1-216	ENST00000592790	NCBP2L	A6PVI3	153 aa	Known RBP	2.91	□□□□□ -1.94
VMP1-216	ENST00000592790	ATXN7	O15265	892 aa	Predicted RBP	2.91	□□□□□ -1.94
VMP1-216	ENST00000592790	IL18BP	O95998	194 aa		2.91	□□□□□ -1.94
VMP1-216	ENST00000592790	IGHV3-13	P01766	116 aa		2.91	□□□□□ -1.94
VMP1-216	ENST00000592790	CSN3	P07498	182 aa		2.91	□□□□□ -1.94
VMP1-216	ENST00000592790	SMIM13	P0DJ93	91 aa		2.91	□□□□□ -1.94
VMP1-216	ENST00000592790	PLP1	P60201	277 aa		2.91	□□□□□ -1.94
VMP1-216	ENST00000592790	HSD52	Q0P140	79 aa		2.91	□□□□□ -1.94
VMP1-216	ENST00000592790	TWIST1	Q15672	202 aa		2.91	□□□□□ -1.94
VMP1-216	ENST00000592790	GCSAML	Q5JQS6	135 aa		2.91	□□□□□ -1.94
VMP1-216	ENST00000592790	DHRS13	Q6UX07	377 aa		2.91	□□□□□ -1.94
VMP1-216	ENST00000592790	PRNT	Q86SH4	94 aa		2.91	□□□□□ -1.94
VMP1-216	ENST00000592790	NUDT10	Q8NFP7	164 aa		2.91	□□□□□ -1.94
VMP1-216	ENST00000592790	NUDT11	Q96G61	164 aa		2.91	□□□□□ -1.94
VMP1-216	ENST00000592790	SRSF8	Q9BRL6	282 aa	Known RBP	2.91	□□□□□ -1.94
VMP1-216	ENST00000592790	SPX	Q9BT56	116 aa		2.91	□□□□□ -1.94
VMP1-216	ENST00000592790	ARRDC1-AS1	Q9H2J1	176 aa		2.91	□□□□□ -1.94
VMP1-216	ENST00000592790	AKIRIN1	Q9H9L7	192 aa	Predicted RBP	2.91	□□□□□ -1.94
VMP1-216	ENST00000592790	C1RL	Q9NZP8	487 aa		2.91	□□□□□ -1.94
VMP1-216	ENST00000592790	FBXL7	Q9UJT9	491 aa		2.91	□□□□□ -1.94
VMP1-216	ENST00000592790	INSIG2	Q9Y5U4	225 aa		2.91	□□□□□ -1.94
VMP1-216	ENST00000592790	KNL1	Q8NG31	2342 aa		2.91	□□□□□ -1.94
VMP1-216	ENST00000592790	IGHV3OR15-7	A0A075B7D8	119 aa		2.91	□□□□□ -1.94
VMP1-216	ENST00000592790	LINC00473	A8K010	186 aa		2.91	□□□□□ -1.94
VMP1-216	ENST00000592790	PMS2P5	A8MQ11	134 aa		2.91	□□□□□ -1.94
VMP1-216	ENST00000592790	SLC25A17	O43808	307 aa		2.91	□□□□□ -1.94
VMP1-216	ENST00000592790	GNG7	O60262	68 aa		2.91	□□□□□ -1.94
VMP1-216	ENST00000592790	ATP5L	O75964	103 aa		2.91	□□□□□ -1.94
VMP1-216	ENST00000592790	TOMM40	O96008	361 aa		2.91	□□□□□ -1.94
VMP1-216	ENST00000592790	PRSS1	P07477	247 aa		2.91	□□□□□ -1.94
VMP1-216	ENST00000592790	RPL7	P18124	248 aa	Known RBP	2.91	□□□□□ -1.94
VMP1-216	ENST00000592790	KIR2DL2	P43627	348 aa	Predicted RBP	2.91	□□□□□ -1.94
VMP1-216	ENST00000592790	HERVK_113	P61574	105 aa		2.91	□□□□□ -1.94
VMP1-216	ENST00000592790	PVRIG	Q6DKI7	326 aa		2.91	□□□□□ -1.94
VMP1-216	ENST00000592790	VKORC1L1	Q8N0U8	176 aa		2.91	□□□□□ -1.94
VMP1-216	ENST00000592790	OR8A1	Q8NGG7	326 aa		2.91	□□□□□ -1.94
VMP1-216	ENST00000592790	TMEM167A	Q8TBQ9	72 aa		2.91	□□□□□ -1.94
VMP1-216	ENST00000592790	C18orf32	Q8TCD1	76 aa		2.91	□□□□□ -1.94
VMP1-216	ENST00000592790	ZNF414	Q96IQ9	312 aa		2.91	□□□□□ -1.94
VMP1-216	ENST00000592790	RNF5	Q99942	180 aa		2.91	□□□□□ -1.94
VMP1-216	ENST00000592790	SSBP3	Q9BWW4	388 aa	Predicted RBP	2.91	□□□□□ -1.94
VMP1-216	ENST00000592790	RPUSD1	Q9UJJ7	312 aa	Known RBP	2.91	□□□□□ -1.94
VMP1-216	ENST00000592790	LSM4	Q9Y4Z0	139 aa	Known RBP	2.91	□□□□□ -1.94
VMP1-216	ENST00000592790	ASXL3	Q9C0F0	2248 aa		2.91	□□□□□ -1.94
VMP1-216	ENST00000592790	SYS1-DBNDD2	H3BUS1	97 aa		2.91	□□□□□ -1.94
VMP1-216	ENST00000592790	GDF9	O60383	454 aa		2.91	□□□□□ -1.94
VMP1-216	ENST00000592790	OR2J3	O76001	311 aa		2.91	□□□□□ -1.94
VMP1-216	ENST00000592790	IGKV3-15	P01624	115 aa		2.91	□□□□□ -1.94
VMP1-216	ENST00000592790		P0C879	139 aa		2.91	□□□□□ -1.94
VMP1-216	ENST00000592790	CKS2	P33552	79 aa		2.91	□□□□□ -1.94
VMP1-216	ENST00000592790	PRR20E	P86478	221 aa		2.91	□□□□□ -1.94
VMP1-216	ENST00000592790	PRR20C	P86479	221 aa		2.91	□□□□□ -1.94
VMP1-216	ENST00000592790	PRR20D	P86480	221 aa		2.91	□□□□□ -1.94
VMP1-216	ENST00000592790	PRR20B	P86481	221 aa		2.91	□□□□□ -1.94
VMP1-216	ENST00000592790	PRR20A	P86496	221 aa		2.91	□□□□□ -1.94
VMP1-216	ENST00000592790	HOXA4	Q00056	320 aa	Predicted RBP	2.91	□□□□□ -1.94
VMP1-216	ENST00000592790	LPAL2	Q16609	132 aa		2.91	□□□□□ -1.94
VMP1-216	ENST00000592790	ALKBH6	Q3KRA9	238 aa		2.91	□□□□□ -1.94
VMP1-216	ENST00000592790	HES3	Q5TGS1	186 aa		2.91	□□□□□ -1.94
VMP1-216	ENST00000592790	CDPF1	Q6NVV7	123 aa		2.91	□□□□□ -1.94
VMP1-216	ENST00000592790	ORMDL3	Q8N138	153 aa		2.91	□□□□□ -1.94
VMP1-216	ENST00000592790	FAM19A2	Q8N3H0	131 aa		2.91	□□□□□ -1.94
VMP1-216	ENST00000592790	TMEM116	Q8NCL8	245 aa		2.91	□□□□□ -1.94
VMP1-216	ENST00000592790	ST6GALNAC3	Q8NDV1	305 aa		2.91	□□□□□ -1.94
VMP1-216	ENST00000592790	PHF3	Q92576	2039 aa	Known RBP	2.91	□□□□□ -1.94
VMP1-216	ENST00000592790	JKAMP	Q9P055	326 aa		2.91	□□□□□ -1.94
VMP1-216	ENST00000592790		A0A1B0GV72	72 aa		2.9	□□□□□ -1.94
VMP1-216	ENST00000592790		A6NNC1	897 aa		2.9	□□□□□ -1.94
VMP1-216	ENST00000592790	BMPR1B	O00238	502 aa		2.9	□□□□□ -1.94
VMP1-216	ENST00000592790	PPP1R17	O96001	155 aa		2.9	□□□□□ -1.94
VMP1-216	ENST00000592790	SAA1	P0DJI8	122 aa	Predicted RBP	2.9	□□□□□ -1.94
VMP1-216	ENST00000592790	ZNF137P	P52743	207 aa		2.9	□□□□□ -1.94
VMP1-216	ENST00000592790	RPL24	P83731	157 aa	Known RBP	2.9	□□□□□ -1.94
VMP1-216	ENST00000592790	HES1	Q14469	280 aa		2.9	□□□□□ -1.94

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