RNA–Protein interactions for RNA: ENST00000591622.1

CIRBP-233, Transcript of cold inducible RNA binding protein, humanhuman

TSL 4

Gene CIRBP, Length 548 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-233ENST00000591622 SPATA25Q9BR10 227 aa12.25□□□□□ -0.45
CIRBP-233ENST00000591622 CCDC32Q9BV29 185 aa12.25□□□□□ -0.45
CIRBP-233ENST00000591622 MED6O75586 246 aa12.24□□□□□ -0.45
CIRBP-233ENST00000591622 ADAP1O75689 374 aa12.24□□□□□ -0.45
CIRBP-233ENST00000591622 APOHP02749 345 aaPredicted RBP12.24□□□□□ -0.45
CIRBP-233ENST00000591622 IFNA4P05014 189 aa12.24□□□□□ -0.45
CIRBP-233ENST00000591622 OR10J1P30954 320 aa12.24□□□□□ -0.45
CIRBP-233ENST00000591622 BMI1P35226 326 aa12.24□□□□□ -0.45
CIRBP-233ENST00000591622 C4orf46Q504U0 113 aa12.24□□□□□ -0.45
CIRBP-233ENST00000591622 OR1S2Q8NGQ3 325 aa12.24□□□□□ -0.45
CIRBP-233ENST00000591622 COQ8AQ8NI60 647 aa12.24□□□□□ -0.45
CIRBP-233ENST00000591622 NPIPB3Q92617 1050 aa12.24□□□□□ -0.45
CIRBP-233ENST00000591622 ACY3Q96HD9 319 aa12.24□□□□□ -0.45
CIRBP-233ENST00000591622 VSIRQ9H7M9 311 aa12.24□□□□□ -0.45
CIRBP-233ENST00000591622 TENM3Q9P273 2699 aa12.23□□□□□ -0.45
CIRBP-233ENST00000591622 SYNGR2O43760 224 aa12.23□□□□□ -0.45
CIRBP-233ENST00000591622 CD5P06127 495 aa12.23□□□□□ -0.45
CIRBP-233ENST00000591622 NPPCP23582 126 aa12.23□□□□□ -0.45
CIRBP-233ENST00000591622 YPEL3P61236 119 aaPredicted RBP12.23□□□□□ -0.45
CIRBP-233ENST00000591622 FAM90A2PQ658T7 463 aa12.23□□□□□ -0.45
CIRBP-233ENST00000591622 S100ZQ8WXG8 99 aa12.23□□□□□ -0.45
CIRBP-233ENST00000591622 ST8SIA2Q92186 375 aa12.23□□□□□ -0.45
CIRBP-233ENST00000591622 IAPPP10997 89 aa12.22□□□□□ -0.45
CIRBP-233ENST00000591622 GPX4P36969 197 aaPredicted RBP12.22□□□□□ -0.45
CIRBP-233ENST00000591622 ODF3L2Q3SX64 289 aa12.22□□□□□ -0.45
CIRBP-233ENST00000591622 TCF24Q7RTU0 167 aa12.22□□□□□ -0.45
CIRBP-233ENST00000591622 LILRB2Q8N423 598 aa12.22□□□□□ -0.45
CIRBP-233ENST00000591622 Q8WTZ3 238 aa12.22□□□□□ -0.45
CIRBP-233ENST00000591622 CIB3Q96Q77 187 aaPredicted RBP12.22□□□□□ -0.45
CIRBP-233ENST00000591622 METTL26Q96S19 204 aa12.22□□□□□ -0.45
CIRBP-233ENST00000591622 MAGT1Q9H0U3 335 aa12.22□□□□□ -0.45
CIRBP-233ENST00000591622 C20orf85Q9H1P6 137 aa12.22□□□□□ -0.45
CIRBP-233ENST00000591622 UBQLN2Q9UHD9 624 aa12.22□□□□□ -0.45
CIRBP-233ENST00000591622 HUWE1Q7Z6Z7 4374 aaKnown RBP12.22□□□□□ -0.45
CIRBP-233ENST00000591622 STAB2Q8WWQ8 2551 aa12.22□□□□□ -0.45
CIRBP-233ENST00000591622 IGHV3-66A0A0C4DH42 116 aa12.21□□□□□ -0.45
CIRBP-233ENST00000591622 MPTX1A8MV57 137 aa12.21□□□□□ -0.45
CIRBP-233ENST00000591622 IFNA21P01568 189 aa12.21□□□□□ -0.45
CIRBP-233ENST00000591622 TCRBP04435 133 aa12.21□□□□□ -0.45
CIRBP-233ENST00000591622 CRYBB3P26998 211 aa12.21□□□□□ -0.45
CIRBP-233ENST00000591622 RAB11AP62491 216 aa12.21□□□□□ -0.45
CIRBP-233ENST00000591622 CITED4Q96RK1 184 aa12.21□□□□□ -0.45
CIRBP-233ENST00000591622 FAM110AQ9BQ89 295 aa12.21□□□□□ -0.45
CIRBP-233ENST00000591622 TMEM231Q9H6L2 316 aa12.21□□□□□ -0.45
CIRBP-233ENST00000591622 IGKV3-7A0A075B6H7 116 aa12.2□□□□□ -0.46
CIRBP-233ENST00000591622 A0A1W2PS18 150 aa12.2□□□□□ -0.46
CIRBP-233ENST00000591622 WRBO00258 174 aa12.2□□□□□ -0.46
CIRBP-233ENST00000591622 DFFBO76075 338 aa12.2□□□□□ -0.46
CIRBP-233ENST00000591622 RD3LP0DJH9 198 aa12.2□□□□□ -0.46
CIRBP-233ENST00000591622 TFPI2P48307 235 aa12.2□□□□□ -0.46
CIRBP-233ENST00000591622 PAFAH1B2P68402 229 aa12.2□□□□□ -0.46
CIRBP-233ENST00000591622 RPP30P78346 268 aaKnown RBP12.2□□□□□ -0.46
CIRBP-233ENST00000591622 ID3Q02535 119 aa12.2□□□□□ -0.46
CIRBP-233ENST00000591622 GAMTQ14353 236 aa12.2□□□□□ -0.46
CIRBP-233ENST00000591622 MITD1Q8WV92 249 aa12.2□□□□□ -0.46
CIRBP-233ENST00000591622 GGTLC1Q9BX51 225 aa12.2□□□□□ -0.46
CIRBP-233ENST00000591622 PTTG2Q9NZH5 202 aa12.2□□□□□ -0.46
CIRBP-233ENST00000591622 TRAV6A0A075B6T7 132 aa12.19□□□□□ -0.46
CIRBP-233ENST00000591622 LOC102724200A0A096LPH7 203 aaPredicted RBP12.19□□□□□ -0.46
CIRBP-233ENST00000591622 TOMM40O96008 361 aa12.19□□□□□ -0.46
CIRBP-233ENST00000591622 CMC4P56277 68 aaPredicted RBP12.19□□□□□ -0.46
CIRBP-233ENST00000591622 GBGT1Q8N5D6 347 aa12.19□□□□□ -0.46
CIRBP-233ENST00000591622 NARS2Q96I59 477 aaKnown RBP12.19□□□□□ -0.46
CIRBP-233ENST00000591622 SLC35E1Q96K37 410 aa12.19□□□□□ -0.46
CIRBP-233ENST00000591622 NUDT15Q9NV35 164 aa12.19□□□□□ -0.46
CIRBP-233ENST00000591622 PAIP2BQ9ULR5 123 aaKnown RBP12.19□□□□□ -0.46
CIRBP-233ENST00000591622 IL4P05112 153 aa12.18□□□□□ -0.46
CIRBP-233ENST00000591622 PSG1P11464 419 aa12.18□□□□□ -0.46
CIRBP-233ENST00000591622 NKX2-1P43699 371 aaPredicted RBP12.18□□□□□ -0.46
CIRBP-233ENST00000591622 RPL11P62913 178 aaKnown RBP12.18□□□□□ -0.46
CIRBP-233ENST00000591622 OR4D5Q8NGN0 318 aa12.18□□□□□ -0.46
CIRBP-233ENST00000591622 GRAMD2BQ96HH9 432 aa12.18□□□□□ -0.46
CIRBP-233ENST00000591622 MS4A6AQ9H2W1 248 aa12.18□□□□□ -0.46
CIRBP-233ENST00000591622 RETNQ9HD89 108 aa12.18□□□□□ -0.46
CIRBP-233ENST00000591622 U3KQE9 123 aa12.18□□□□□ -0.46
CIRBP-233ENST00000591622 ZFP92A6NM28 416 aa12.17□□□□□ -0.46
CIRBP-233ENST00000591622 DNASE2O00115 360 aaPredicted RBP12.17□□□□□ -0.46
CIRBP-233ENST00000591622 P2RY1P47900 373 aa12.17□□□□□ -0.46
CIRBP-233ENST00000591622 POLR2GP62487 172 aaKnown RBP eCLIP12.17□□□□□ -0.46
CIRBP-233ENST00000591622 USF2Q15853 346 aaPredicted RBP12.17□□□□□ -0.46
CIRBP-233ENST00000591622 IAH1Q2TAA2 248 aaPredicted RBP12.17□□□□□ -0.46
CIRBP-233ENST00000591622 SPANXN5Q5MJ07 72 aa12.17□□□□□ -0.46
CIRBP-233ENST00000591622 MZT2BQ6NZ67 158 aa12.17□□□□□ -0.46
CIRBP-233ENST00000591622 WDR12Q9GZL7 423 aaKnown RBP12.17□□□□□ -0.46
CIRBP-233ENST00000591622 BATF3Q9NR55 127 aa12.17□□□□□ -0.46
CIRBP-233ENST00000591622 TBC1D24Q9ULP9 559 aa12.17□□□□□ -0.46
CIRBP-233ENST00000591622 STRAPQ9Y3F4 350 aaKnown RBP12.17□□□□□ -0.46
CIRBP-233ENST00000591622 NBEAL2Q6ZNJ1 2754 aa12.16□□□□□ -0.46
CIRBP-233ENST00000591622 IGKV1D-37A0A075B6S9 117 aa12.16□□□□□ -0.46
CIRBP-233ENST00000591622 TRAV2A0A0B4J234 112 aa12.16□□□□□ -0.46
CIRBP-233ENST00000591622 FAM240BA0A1B0GVZ2 78 aa12.16□□□□□ -0.46
CIRBP-233ENST00000591622 PRSS46E5RG02 174 aa12.16□□□□□ -0.46
CIRBP-233ENST00000591622 H3BP45 60 aa12.16□□□□□ -0.46
CIRBP-233ENST00000591622 HNRNPCP07910 306 aaKnown RBP eCLIP12.16□□□□□ -0.46
CIRBP-233ENST00000591622 H2AFB2P0C5Z0 115 aa12.16□□□□□ -0.46
CIRBP-233ENST00000591622 ZNF90Q03938 601 aa12.16□□□□□ -0.46
CIRBP-233ENST00000591622 ASAH1Q13510 395 aa12.16□□□□□ -0.46
CIRBP-233ENST00000591622 ZNF846Q147U1 533 aa12.16□□□□□ -0.46
CIRBP-233ENST00000591622 WFDC3Q8IUB2 231 aa12.16□□□□□ -0.46
CIRBP-233ENST00000591622 APRG1Q8IVJ8 170 aa12.16□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 74.5 ms