RNA–Protein interactions for RNA: ENST00000589828.1

VAT1-207, Transcript of vesicle amine transport 1, humanhuman

TSL 2

Gene VAT1, Length 521 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAT1-207ENST00000589828 ERVK-16P61578 105 aa5.54□□□□□ -1.52
VAT1-207ENST00000589828 DAD1P61803 113 aa5.54□□□□□ -1.52
VAT1-207ENST00000589828 NUTF2P61970 127 aaKnown RBP5.54□□□□□ -1.52
VAT1-207ENST00000589828 ZNF674Q2M3X9 581 aa5.54□□□□□ -1.52
VAT1-207ENST00000589828 OGFRL1Q5TC84 451 aaPredicted RBP5.54□□□□□ -1.52
VAT1-207ENST00000589828 CADM3Q8N126 398 aa5.54□□□□□ -1.52
VAT1-207ENST00000589828 C1orf158Q8N1D5 194 aa5.54□□□□□ -1.52
VAT1-207ENST00000589828 DHRSXQ8N5I4 330 aa5.54□□□□□ -1.52
VAT1-207ENST00000589828 ZNF114Q8NC26 417 aa5.54□□□□□ -1.52
VAT1-207ENST00000589828 GLMPQ8WWB7 406 aa5.54□□□□□ -1.52
VAT1-207ENST00000589828 FCAMRQ8WWV6 532 aa5.54□□□□□ -1.52
VAT1-207ENST00000589828 FRZBQ92765 325 aa5.54□□□□□ -1.52
VAT1-207ENST00000589828 TMEM56Q96MV1 263 aa5.54□□□□□ -1.52
VAT1-207ENST00000589828 TSC22D3Q99576 134 aa5.54□□□□□ -1.52
VAT1-207ENST00000589828 BCL7BQ9BQE9 202 aa5.54□□□□□ -1.52
VAT1-207ENST00000589828 PRNDQ9UKY0 176 aa5.54□□□□□ -1.52
VAT1-207ENST00000589828 HLA-DRB4X5D2U9 266 aa5.54□□□□□ -1.52
VAT1-207ENST00000589828 LOC102723971A0A1B0GUV8 181 aa5.53□□□□□ -1.52
VAT1-207ENST00000589828 LOC105371267A0A1B0GV96 52 aa5.53□□□□□ -1.52
VAT1-207ENST00000589828 RPS10-NUDT3A0A1W2PQS6 291 aa5.53□□□□□ -1.52
VAT1-207ENST00000589828 HSBP1L1C9JCN9 74 aa5.53□□□□□ -1.52
VAT1-207ENST00000589828 PTGES3LE9PB15 166 aa5.53□□□□□ -1.52
VAT1-207ENST00000589828 PFDN1O60925 122 aa5.53□□□□□ -1.52
VAT1-207ENST00000589828 SNAPC5O75971 98 aa5.53□□□□□ -1.52
VAT1-207ENST00000589828 NUDT3O95989 172 aa5.53□□□□□ -1.52
VAT1-207ENST00000589828 PRM2P04554 102 aa5.53□□□□□ -1.52
VAT1-207ENST00000589828 HSMCR30P0CW71 290 aa5.53□□□□□ -1.52
VAT1-207ENST00000589828 NPBWR1P48145 328 aa5.53□□□□□ -1.52
VAT1-207ENST00000589828 GNG2P59768 71 aa5.53□□□□□ -1.52
VAT1-207ENST00000589828 KRTAP10-1P60331 282 aa5.53□□□□□ -1.52
VAT1-207ENST00000589828 TSPAN5P62079 268 aa5.53□□□□□ -1.52
VAT1-207ENST00000589828 ARL6IP1Q15041 203 aa5.53□□□□□ -1.52
VAT1-207ENST00000589828 MLANAQ16655 118 aa5.53□□□□□ -1.52
VAT1-207ENST00000589828 RGS21Q2M5E4 152 aa5.53□□□□□ -1.52
VAT1-207ENST00000589828 TMEM17Q86X19 198 aa5.53□□□□□ -1.52
VAT1-207ENST00000589828 C8orf59Q8N0T1 100 aaPredicted RBP5.53□□□□□ -1.52
VAT1-207ENST00000589828 ZNF709Q8N972 641 aa5.53□□□□□ -1.52
VAT1-207ENST00000589828 BEST4Q8NFU0 473 aa5.53□□□□□ -1.52
VAT1-207ENST00000589828 METTL26Q96S19 204 aa5.53□□□□□ -1.52
VAT1-207ENST00000589828 Q9H8V8 135 aa5.53□□□□□ -1.52
VAT1-207ENST00000589828 LOC100996750A0A140TA64 210 aa5.52□□□□□ -1.53
VAT1-207ENST00000589828 SMIM30A4D0T7 59 aa5.52□□□□□ -1.53
VAT1-207ENST00000589828 PGLYRP1O75594 196 aaPredicted RBP5.52□□□□□ -1.53
VAT1-207ENST00000589828 IGKV1-17P01599 117 aa5.52□□□□□ -1.53
VAT1-207ENST00000589828 RLN1P04808 185 aa5.52□□□□□ -1.53
VAT1-207ENST00000589828 F2RP25116 425 aa5.52□□□□□ -1.53
VAT1-207ENST00000589828 RAB14P61106 215 aa5.52□□□□□ -1.53
VAT1-207ENST00000589828 KCTD21Q4G0X4 260 aa5.52□□□□□ -1.53
VAT1-207ENST00000589828 SPINK9Q5DT21 86 aa5.52□□□□□ -1.53
VAT1-207ENST00000589828 XP32Q5T750 250 aa5.52□□□□□ -1.53
VAT1-207ENST00000589828 GSG1LQ6UXU4 331 aa5.52□□□□□ -1.53
VAT1-207ENST00000589828 Q6ZRN7 208 aaPredicted RBP5.52□□□□□ -1.53
VAT1-207ENST00000589828 TPRA1Q86W33 373 aa5.52□□□□□ -1.53
VAT1-207ENST00000589828 KRTAP4-6Q9BYQ5 205 aa5.52□□□□□ -1.53
VAT1-207ENST00000589828 WDR12Q9GZL7 423 aaKnown RBP5.52□□□□□ -1.53
VAT1-207ENST00000589828 SLC35B3Q9H1N7 401 aa5.52□□□□□ -1.53
VAT1-207ENST00000589828 FNDC4Q9H6D8 234 aaPredicted RBP5.52□□□□□ -1.53
VAT1-207ENST00000589828 FKBP11Q9NYL4 201 aa5.52□□□□□ -1.53
VAT1-207ENST00000589828 HMCN2Q8NDA2 5059 aa5.52□□□□□ -1.53
VAT1-207ENST00000589828 TRAV1-2A0A0B4J238 106 aa5.51□□□□□ -1.53
VAT1-207ENST00000589828 F5H768 121 aa5.51□□□□□ -1.53
VAT1-207ENST00000589828 PDCD5O14737 125 aa5.51□□□□□ -1.53
VAT1-207ENST00000589828 IGKV1-39P01597 117 aa5.51□□□□□ -1.53
VAT1-207ENST00000589828 HBE1P02100 147 aa5.51□□□□□ -1.53
VAT1-207ENST00000589828 IGKV1D-39P04432 117 aa5.51□□□□□ -1.53
VAT1-207ENST00000589828 PSMA1P25786 263 aaKnown RBP5.51□□□□□ -1.53
VAT1-207ENST00000589828 NUP62P37198 522 aaPredicted RBP5.51□□□□□ -1.53
VAT1-207ENST00000589828 PCP4P48539 62 aa5.51□□□□□ -1.53
VAT1-207ENST00000589828 CCL18P55774 89 aa5.51□□□□□ -1.53
VAT1-207ENST00000589828 HAMPP81172 84 aa5.51□□□□□ -1.53
VAT1-207ENST00000589828 PRCDQ00LT1 54 aa5.51□□□□□ -1.53
VAT1-207ENST00000589828 ODF1Q14990 250 aa5.51□□□□□ -1.53
VAT1-207ENST00000589828 TRAM1Q15629 374 aa5.51□□□□□ -1.53
VAT1-207ENST00000589828 TIGITQ495A1 244 aa5.51□□□□□ -1.53
VAT1-207ENST00000589828 SSX7Q7RTT5 188 aa5.51□□□□□ -1.53
VAT1-207ENST00000589828 HOGA1Q86XE5 327 aa5.51□□□□□ -1.53
VAT1-207ENST00000589828 LGALS14Q8TCE9 139 aa5.51□□□□□ -1.53
VAT1-207ENST00000589828 C17orf77Q96MU5 243 aa5.51□□□□□ -1.53
VAT1-207ENST00000589828 Q9H3A6 140 aa5.51□□□□□ -1.53
VAT1-207ENST00000589828 PGPEP1LA6NFU8 196 aa5.5□□□□□ -1.53
VAT1-207ENST00000589828 RAB3BP20337 219 aa5.5□□□□□ -1.53
VAT1-207ENST00000589828 HTR2BP41595 481 aa5.5□□□□□ -1.53
VAT1-207ENST00000589828 NKX2-1P43699 371 aaPredicted RBP5.5□□□□□ -1.53
VAT1-207ENST00000589828 ALDH3B2P48448 385 aa5.5□□□□□ -1.53
VAT1-207ENST00000589828 HSPE1P61604 102 aaKnown RBP5.5□□□□□ -1.53
VAT1-207ENST00000589828 SNRPD3P62318 126 aaKnown RBP5.5□□□□□ -1.53
VAT1-207ENST00000589828 MLLT11Q13015 90 aaPredicted RBP5.5□□□□□ -1.53
VAT1-207ENST00000589828 FCN2Q15485 313 aa5.5□□□□□ -1.53
VAT1-207ENST00000589828 IZUMO4Q1ZYL8 232 aa5.5□□□□□ -1.53
VAT1-207ENST00000589828 RRN3P1Q2M238 152 aa5.5□□□□□ -1.53
VAT1-207ENST00000589828 FAM122CQ6P4D5 195 aa5.5□□□□□ -1.53
VAT1-207ENST00000589828 TMEM230Q96A57 120 aa5.5□□□□□ -1.53
VAT1-207ENST00000589828 SEC22AQ96IW7 307 aa5.5□□□□□ -1.53
VAT1-207ENST00000589828 UHRF2Q96PU4 802 aa5.5□□□□□ -1.53
VAT1-207ENST00000589828 SEPSECSQ9HD40 501 aaKnown RBP5.5□□□□□ -1.53
VAT1-207ENST00000589828 NRN1Q9NPD7 142 aa5.5□□□□□ -1.53
VAT1-207ENST00000589828 ACOT13Q9NPJ3 140 aa5.5□□□□□ -1.53
VAT1-207ENST00000589828 ZNF586Q9NXT0 402 aa5.5□□□□□ -1.53
VAT1-207ENST00000589828 PRR13Q9NZ81 148 aa5.5□□□□□ -1.53
VAT1-207ENST00000589828 NDUFA13Q9P0J0 144 aa5.5□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 85.6 ms