RNA–Protein interactions for RNA: ENST00000588860.5

SMAD4-206, Transcript of SMAD family member 4, humanhuman

TSL 4

Gene SMAD4, Length 779 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-206ENST00000588860 H3BQ15 152 aa6.95□□□□□ -1.3
SMAD4-206ENST00000588860 COX7A2P2O60397 106 aa6.95□□□□□ -1.3
SMAD4-206ENST00000588860 TSPAN9O75954 239 aa6.95□□□□□ -1.3
SMAD4-206ENST00000588860 MT-CO2P00403 227 aa6.95□□□□□ -1.3
SMAD4-206ENST00000588860 IGHV1-69P01742 117 aa6.95□□□□□ -1.3
SMAD4-206ENST00000588860 CRYGCP07315 174 aa6.95□□□□□ -1.3
SMAD4-206ENST00000588860 MSMBP08118 114 aa6.95□□□□□ -1.3
SMAD4-206ENST00000588860 SLC25A16P16260 332 aa6.95□□□□□ -1.3
SMAD4-206ENST00000588860 GCHFRP30047 84 aa6.95□□□□□ -1.3
SMAD4-206ENST00000588860 CD81P60033 236 aa6.95□□□□□ -1.3
SMAD4-206ENST00000588860 UBE2G2P60604 165 aa6.95□□□□□ -1.3
SMAD4-206ENST00000588860 RHEBQ15382 184 aa6.95□□□□□ -1.3
SMAD4-206ENST00000588860 TMEM249Q2WGJ8 235 aa6.95□□□□□ -1.3
SMAD4-206ENST00000588860 FAM78BQ5VT40 261 aa6.95□□□□□ -1.3
SMAD4-206ENST00000588860 FAM90A2PQ658T7 463 aa6.95□□□□□ -1.3
SMAD4-206ENST00000588860 MIR17HGQ75NE6 70 aa6.95□□□□□ -1.3
SMAD4-206ENST00000588860 OR4F5Q8NH21 305 aa6.95□□□□□ -1.3
SMAD4-206ENST00000588860 NANPQ8TBE9 248 aa6.95□□□□□ -1.3
SMAD4-206ENST00000588860 TVP23CQ96ET8 276 aa6.95□□□□□ -1.3
SMAD4-206ENST00000588860 OR4F4Q96R69 305 aa6.95□□□□□ -1.3
SMAD4-206ENST00000588860 NIPSNAP3BQ9BS92 247 aa6.95□□□□□ -1.3
SMAD4-206ENST00000588860 FAM103A1Q9BTL3 118 aaKnown RBP6.95□□□□□ -1.3
SMAD4-206ENST00000588860 WNT10AQ9GZT5 417 aa6.95□□□□□ -1.3
SMAD4-206ENST00000588860 SEPSECSQ9HD40 501 aaKnown RBP6.95□□□□□ -1.3
SMAD4-206ENST00000588860 C1RLQ9NZP8 487 aa6.95□□□□□ -1.3
SMAD4-206ENST00000588860 DOK5Q9P104 306 aa6.95□□□□□ -1.3
SMAD4-206ENST00000588860 DMRT1Q9Y5R6 373 aa6.95□□□□□ -1.3
SMAD4-206ENST00000588860 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP6.95□□□□□ -1.34e-10■■■■■ 37.9
SMAD4-206ENST00000588860 TACC2O95359 2948 aa6.94□□□□□ -1.3
SMAD4-206ENST00000588860 TRAV40A0A0B4J280 105 aa6.94□□□□□ -1.3
SMAD4-206ENST00000588860 C11orf94C9JXX5 98 aa6.94□□□□□ -1.3
SMAD4-206ENST00000588860 OR5G3P0C626 314 aa6.94□□□□□ -1.3
SMAD4-206ENST00000588860 CTRB1P17538 263 aa6.94□□□□□ -1.3
SMAD4-206ENST00000588860 BPIFB3P59826 476 aa6.94□□□□□ -1.3
SMAD4-206ENST00000588860 SELENOTP62341 195 aa6.94□□□□□ -1.3
SMAD4-206ENST00000588860 CX3CL1P78423 397 aa6.94□□□□□ -1.3
SMAD4-206ENST00000588860 ZNF90Q03938 601 aa6.94□□□□□ -1.3
SMAD4-206ENST00000588860 ZNF674Q2M3X9 581 aa6.94□□□□□ -1.3
SMAD4-206ENST00000588860 CST9LP1Q5W188 147 aa6.94□□□□□ -1.3
SMAD4-206ENST00000588860 CTRB2Q6GPI1 263 aa6.94□□□□□ -1.3
SMAD4-206ENST00000588860 KRTAP1-3Q8IUG1 177 aa6.94□□□□□ -1.3
SMAD4-206ENST00000588860 OR1L4Q8NGR5 311 aa6.94□□□□□ -1.3
SMAD4-206ENST00000588860 OR4X1Q8NH49 305 aa6.94□□□□□ -1.3
SMAD4-206ENST00000588860 RNF2Q99496 336 aa6.94□□□□□ -1.3
SMAD4-206ENST00000588860 TRGV9Q99603 122 aa6.94□□□□□ -1.3
SMAD4-206ENST00000588860 RASL11BQ9BPW5 248 aa6.94□□□□□ -1.3
SMAD4-206ENST00000588860 C19orf24Q9BVV8 132 aa6.94□□□□□ -1.3
SMAD4-206ENST00000588860 MRPL32Q9BYC8 188 aaKnown RBP6.94□□□□□ -1.3
SMAD4-206ENST00000588860 SMCO4Q9NRQ5 59 aa6.94□□□□□ -1.3
SMAD4-206ENST00000588860 TNFRSF19Q9NS68 423 aa6.94□□□□□ -1.3
SMAD4-206ENST00000588860 TECRQ9NZ01 308 aaKnown RBP6.94□□□□□ -1.3
SMAD4-206ENST00000588860 NBEAL1Q6ZS30 2694 aa6.94□□□□□ -1.3
SMAD4-206ENST00000588860 ABCA1O95477 2261 aa6.93□□□□□ -1.3
SMAD4-206ENST00000588860 ZNF727A8MUV8 499 aa6.93□□□□□ -1.3
SMAD4-206ENST00000588860 B4DSR2 109 aa6.93□□□□□ -1.3
SMAD4-206ENST00000588860 F6UZH7 168 aa6.93□□□□□ -1.3
SMAD4-206ENST00000588860 TMEM250H0YL14 139 aa6.93□□□□□ -1.3
SMAD4-206ENST00000588860 I3L2K1 104 aa6.93□□□□□ -1.3
SMAD4-206ENST00000588860 ATP5G3P48201 142 aa6.93□□□□□ -1.3
SMAD4-206ENST00000588860 TAS2R45P59539 299 aa6.93□□□□□ -1.3
SMAD4-206ENST00000588860 KRTAP10-9P60411 292 aa6.93□□□□□ -1.3
SMAD4-206ENST00000588860 NDPQ00604 133 aa6.93□□□□□ -1.3
SMAD4-206ENST00000588860 KIAA0141Q14154 515 aaPredicted RBP6.93□□□□□ -1.3
SMAD4-206ENST00000588860 C10orf113Q5VZT2 155 aa6.93□□□□□ -1.3
SMAD4-206ENST00000588860 ZNF562Q6V9R5 426 aa6.93□□□□□ -1.3
SMAD4-206ENST00000588860 BRD3OSQ6XYD6 125 aa6.93□□□□□ -1.3
SMAD4-206ENST00000588860 Q8N9W7 124 aa6.93□□□□□ -1.3
SMAD4-206ENST00000588860 OR1L6Q8NGR2 347 aa6.93□□□□□ -1.3
SMAD4-206ENST00000588860 RPUSD4Q96CM3 377 aaKnown RBP6.93□□□□□ -1.3
SMAD4-206ENST00000588860 PFDN5Q99471 154 aa6.93□□□□□ -1.3
SMAD4-206ENST00000588860 GSX1Q9H4S2 264 aaPredicted RBP6.93□□□□□ -1.3
SMAD4-206ENST00000588860 C7orf69Q9H7B7 122 aa6.93□□□□□ -1.3
SMAD4-206ENST00000588860 DNAJC4Q9NNZ3 241 aa6.93□□□□□ -1.3
SMAD4-206ENST00000588860 IGHV7-81A0A0B4J1V7 117 aa6.92□□□□□ -1.3
SMAD4-206ENST00000588860 TRAV20A0A0B4J274 112 aa6.92□□□□□ -1.3
SMAD4-206ENST00000588860 A0A0U1RQK1 487 aa6.92□□□□□ -1.3
SMAD4-206ENST00000588860 PSMB11A5LHX3 300 aa6.92□□□□□ -1.3
SMAD4-206ENST00000588860 NPIPB5A8MRT5 1133 aa6.92□□□□□ -1.3
SMAD4-206ENST00000588860 PDE6DO43924 150 aa6.92□□□□□ -1.3
SMAD4-206ENST00000588860 OR7C2O60412 319 aa6.92□□□□□ -1.3
SMAD4-206ENST00000588860 NDUFS6O75380 124 aaKnown RBP6.92□□□□□ -1.3
SMAD4-206ENST00000588860 C8orf88P0DMB2 117 aa6.92□□□□□ -1.3
SMAD4-206ENST00000588860 IGHV4-38-2P0DP08 117 aa6.92□□□□□ -1.3
SMAD4-206ENST00000588860 TIGITQ495A1 244 aa6.92□□□□□ -1.3
SMAD4-206ENST00000588860 KLF17Q5JT82 389 aaPredicted RBP6.92□□□□□ -1.3
SMAD4-206ENST00000588860 ASPHD1Q5U4P2 390 aa6.92□□□□□ -1.3
SMAD4-206ENST00000588860 TMEM116Q8NCL8 245 aa6.92□□□□□ -1.3
SMAD4-206ENST00000588860 OR1B1Q8NGR6 318 aa6.92□□□□□ -1.3
SMAD4-206ENST00000588860 TMEM37Q8WXS4 190 aa6.92□□□□□ -1.3
SMAD4-206ENST00000588860 RBM14Q96PK6 669 aaKnown RBP6.92□□□□□ -1.3
SMAD4-206ENST00000588860 SMIM7Q9BQ49 75 aa6.92□□□□□ -1.3
SMAD4-206ENST00000588860 HSPB9Q9BQS6 159 aa6.92□□□□□ -1.3
SMAD4-206ENST00000588860 SLC25A2Q9BXI2 301 aa6.92□□□□□ -1.3
SMAD4-206ENST00000588860 TMEM167BQ9NRX6 74 aa6.92□□□□□ -1.3
SMAD4-206ENST00000588860 BEX4Q9NWD9 120 aaPredicted RBP6.92□□□□□ -1.3
SMAD4-206ENST00000588860 HIF1ANQ9NWT6 349 aa6.92□□□□□ -1.3
SMAD4-206ENST00000588860 NAT8Q9UHE5 227 aa6.92□□□□□ -1.3
SMAD4-206ENST00000588860 YTHDF2Q9Y5A9 579 aaKnown RBP6.92□□□□□ -1.3
SMAD4-206ENST00000588860 TRAV5A0A0B4J249 113 aa6.91□□□□□ -1.3
SMAD4-206ENST00000588860 K7EIM0 57 aa6.91□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms