RNA–Protein interactions for RNA: ENST00000588109.5

LIG3-210, Transcript of DNA ligase 3, humanhuman

TSL 4

Gene LIG3, Length 592 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG3-210ENST00000588109 AKR1C1Q04828 323 aa4.14□□□□□ -1.75
LIG3-210ENST00000588109 SLC38A11Q08AI6 406 aa4.14□□□□□ -1.75
LIG3-210ENST00000588109 OR2F1Q13607 317 aa4.14□□□□□ -1.75
LIG3-210ENST00000588109 EXOSC2Q13868 293 aaKnown RBP4.14□□□□□ -1.75
LIG3-210ENST00000588109 CLINT1Q14677 625 aa4.14□□□□□ -1.75
LIG3-210ENST00000588109 ZNF674Q2M3X9 581 aa4.14□□□□□ -1.75
LIG3-210ENST00000588109 BSXQ3C1V8 233 aa4.14□□□□□ -1.75
LIG3-210ENST00000588109 KHDC1LQ5JSQ8 128 aa4.14□□□□□ -1.75
LIG3-210ENST00000588109 ACSM6Q6P461 480 aa4.14□□□□□ -1.75
LIG3-210ENST00000588109 TEX38Q6PEX7 206 aa4.14□□□□□ -1.75
LIG3-210ENST00000588109 ZNF329Q86UD4 541 aa4.14□□□□□ -1.75
LIG3-210ENST00000588109 NECAP1Q8NC96 275 aa4.14□□□□□ -1.75
LIG3-210ENST00000588109 OR11H4Q8NGC9 324 aa4.14□□□□□ -1.75
LIG3-210ENST00000588109 OR4X2Q8NGF9 303 aa4.14□□□□□ -1.75
LIG3-210ENST00000588109 OR5C1Q8NGR4 320 aa4.14□□□□□ -1.75
LIG3-210ENST00000588109 LINC01006Q8NI28 216 aa4.14□□□□□ -1.75
LIG3-210ENST00000588109 TMEM170AQ8WVE7 144 aa4.14□□□□□ -1.75
LIG3-210ENST00000588109 PPP1R14BQ96C90 147 aa4.14□□□□□ -1.75
LIG3-210ENST00000588109 ACY3Q96HD9 319 aa4.14□□□□□ -1.75
LIG3-210ENST00000588109 SLC35E1Q96K37 410 aa4.14□□□□□ -1.75
LIG3-210ENST00000588109 AQP10Q96PS8 301 aa4.14□□□□□ -1.75
LIG3-210ENST00000588109 C16orf95Q9H693 158 aa4.14□□□□□ -1.75
LIG3-210ENST00000588109 SLA2Q9H6Q3 261 aa4.14□□□□□ -1.75
LIG3-210ENST00000588109 SERTAD4Q9NUC0 356 aa4.14□□□□□ -1.75
LIG3-210ENST00000588109 HSPB11Q9Y547 144 aa4.14□□□□□ -1.75
LIG3-210ENST00000588109 MXRA5Q9NR99 2828 aa4.14□□□□□ -1.75
LIG3-210ENST00000588109 CUBNO60494 3623 aa4.13□□□□□ -1.75
LIG3-210ENST00000588109 A0A0G2JLM5 398 aa4.13□□□□□ -1.75
LIG3-210ENST00000588109 UBE2L5PA0A1B0GUS4 154 aa4.13□□□□□ -1.75
LIG3-210ENST00000588109 TMEM89A2RUT3 159 aa4.13□□□□□ -1.75
LIG3-210ENST00000588109 CLPSL1A2RUU4 121 aa4.13□□□□□ -1.75
LIG3-210ENST00000588109 RNF222A6NCQ9 220 aa4.13□□□□□ -1.75
LIG3-210ENST00000588109 FAM223BA6NKX1 122 aa4.13□□□□□ -1.75
LIG3-210ENST00000588109 SOX15O60248 233 aa4.13□□□□□ -1.75
LIG3-210ENST00000588109 SCGB2A1O75556 95 aa4.13□□□□□ -1.75
LIG3-210ENST00000588109 DFFBO76075 338 aa4.13□□□□□ -1.75
LIG3-210ENST00000588109 NDUFB8O95169 186 aa4.13□□□□□ -1.75
LIG3-210ENST00000588109 IGHV3-48P01763 117 aa4.13□□□□□ -1.75
LIG3-210ENST00000588109 IGHG4P01861 327 aa4.13□□□□□ -1.75
LIG3-210ENST00000588109 CXCL2P19875 107 aa4.13□□□□□ -1.75
LIG3-210ENST00000588109 MDKP21741 143 aaPredicted RBP4.13□□□□□ -1.75
LIG3-210ENST00000588109 PPIFP30405 207 aaKnown RBP4.13□□□□□ -1.75
LIG3-210ENST00000588109 GPX4P36969 197 aaPredicted RBP4.13□□□□□ -1.75
LIG3-210ENST00000588109 RAB9AP51151 201 aa4.13□□□□□ -1.75
LIG3-210ENST00000588109 CFHR3Q02985 330 aa4.13□□□□□ -1.75
LIG3-210ENST00000588109 ATP5G2Q06055 141 aa4.13□□□□□ -1.75
LIG3-210ENST00000588109 ARL16Q0P5N6 197 aa4.13□□□□□ -1.75
LIG3-210ENST00000588109 ZNF345Q14585 488 aa4.13□□□□□ -1.75
LIG3-210ENST00000588109 ATP6V1FQ16864 119 aa4.13□□□□□ -1.75
LIG3-210ENST00000588109 C15orf32Q32M92 178 aa4.13□□□□□ -1.75
LIG3-210ENST00000588109 Q56UQ5 140 aa4.13□□□□□ -1.75
LIG3-210ENST00000588109 IGFL4Q6B9Z1 124 aa4.13□□□□□ -1.75
LIG3-210ENST00000588109 SLC16A13Q7RTY0 426 aa4.13□□□□□ -1.75
LIG3-210ENST00000588109 FAM223AQ8IWN6 122 aa4.13□□□□□ -1.75
LIG3-210ENST00000588109 C9orf62Q8N4C0 152 aa4.13□□□□□ -1.75
LIG3-210ENST00000588109 KCNRGQ8N5I3 272 aa4.13□□□□□ -1.75
LIG3-210ENST00000588109 COMMD1Q8N668 190 aa4.13□□□□□ -1.75
LIG3-210ENST00000588109 KLHDC1Q8N7A1 406 aa4.13□□□□□ -1.75
LIG3-210ENST00000588109 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP4.13□□□□□ -1.75
LIG3-210ENST00000588109 UBAC2Q8NBM4 344 aa4.13□□□□□ -1.75
LIG3-210ENST00000588109 OR5AU1Q8NGC0 362 aa4.13□□□□□ -1.75
LIG3-210ENST00000588109 CACNG8Q8WXS5 425 aa4.13□□□□□ -1.75
LIG3-210ENST00000588109 RAB24Q969Q5 203 aa4.13□□□□□ -1.75
LIG3-210ENST00000588109 EEF1AKMT3Q96AZ1 226 aa4.13□□□□□ -1.75
LIG3-210ENST00000588109 CXorf58Q96LI9 332 aa4.13□□□□□ -1.75
LIG3-210ENST00000588109 ATP5SQ99766 215 aa4.13□□□□□ -1.75
LIG3-210ENST00000588109 TMEM147Q9BVK8 224 aa4.13□□□□□ -1.75
LIG3-210ENST00000588109 ARL6Q9H0F7 186 aa4.13□□□□□ -1.75
LIG3-210ENST00000588109 UQCC1Q9NVA1 299 aa4.13□□□□□ -1.75
LIG3-210ENST00000588109 FAM30AQ9NZY2 134 aa4.13□□□□□ -1.75
LIG3-210ENST00000588109 FBXL17Q9UF56 701 aa4.13□□□□□ -1.75
LIG3-210ENST00000588109 DMRT1Q9Y5R6 373 aa4.13□□□□□ -1.75
LIG3-210ENST00000588109 S4R3C0 116 aa4.13□□□□□ -1.75
LIG3-210ENST00000588109 BORCS7-ASMTA0A0B4J1R7 106 aa4.12□□□□□ -1.75
LIG3-210ENST00000588109 A0A1B0GUS0 222 aa4.12□□□□□ -1.75
LIG3-210ENST00000588109 TCRBV4S1A1TA0A5B7 111 aa4.12□□□□□ -1.75
LIG3-210ENST00000588109 MFSD2BA6NFX1 497 aa4.12□□□□□ -1.75
LIG3-210ENST00000588109 ZFP92A6NM28 416 aa4.12□□□□□ -1.75
LIG3-210ENST00000588109 PMS2P5A8MQ11 134 aa4.12□□□□□ -1.75
LIG3-210ENST00000588109 I3L2K1 104 aa4.12□□□□□ -1.75
LIG3-210ENST00000588109 K7EIM0 57 aa4.12□□□□□ -1.75
LIG3-210ENST00000588109 TAAR5O14804 337 aa4.12□□□□□ -1.75
LIG3-210ENST00000588109 BCL2L11O43521 198 aa4.12□□□□□ -1.75
LIG3-210ENST00000588109 GNG7O60262 68 aa4.12□□□□□ -1.75
LIG3-210ENST00000588109 BRI3O95415 125 aa4.12□□□□□ -1.75
LIG3-210ENST00000588109 IFNA5P01569 189 aa4.12□□□□□ -1.75
LIG3-210ENST00000588109 IGHV3-11P01762 117 aa4.12□□□□□ -1.75
LIG3-210ENST00000588109 IGHV3-23P01764 117 aa4.12□□□□□ -1.75
LIG3-210ENST00000588109 ELANEP08246 267 aa4.12□□□□□ -1.75
LIG3-210ENST00000588109 FGF7P21781 194 aa4.12□□□□□ -1.75
LIG3-210ENST00000588109 PSMB8P28062 276 aa4.12□□□□□ -1.75
LIG3-210ENST00000588109 NPBWR1P48145 328 aa4.12□□□□□ -1.75
LIG3-210ENST00000588109 RND2P52198 227 aa4.12□□□□□ -1.75
LIG3-210ENST00000588109 PTTG1IPP53801 180 aa4.12□□□□□ -1.75
LIG3-210ENST00000588109 MFAP4P55083 255 aa4.12□□□□□ -1.75
LIG3-210ENST00000588109 DLK1P80370 383 aa4.12□□□□□ -1.75
LIG3-210ENST00000588109 ZNF266Q14584 549 aa4.12□□□□□ -1.75
LIG3-210ENST00000588109 LGALSLQ3ZCW2 172 aaPredicted RBP4.12□□□□□ -1.75
LIG3-210ENST00000588109 PVRIGQ6DKI7 326 aa4.12□□□□□ -1.75
LIG3-210ENST00000588109 C10orf99Q6UWK7 81 aa4.12□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms