RNA–Protein interactions for RNA: ENST00000581113.6

NF1-220, Transcript of neurofibromin 1, humanhuman

TSL 5

Gene NF1, Length 1,464 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NF1-220ENST00000581113 IGHV6-1A0A0B4J1U7 121 aa2.72□□□□□ -1.97
NF1-220ENST00000581113 A0A1B0GVG6 124 aa2.72□□□□□ -1.97
NF1-220ENST00000581113 NKX2-6A6NCS4 301 aa2.72□□□□□ -1.97
NF1-220ENST00000581113 KNCNA6PVL3 124 aa2.72□□□□□ -1.97
NF1-220ENST00000581113 C4orf51C9J302 202 aa2.72□□□□□ -1.97
NF1-220ENST00000581113 NDUFC2-KCTD14E9PQ53 114 aa2.72□□□□□ -1.97
NF1-220ENST00000581113 KRTAP4-16G5E9R7 235 aaPredicted RBP2.72□□□□□ -1.97
NF1-220ENST00000581113 MRASO14807 208 aa2.72□□□□□ -1.97
NF1-220ENST00000581113 CDRT1O95170 752 aa2.72□□□□□ -1.97
NF1-220ENST00000581113 SERPINE1P05121 402 aa2.72□□□□□ -1.97
NF1-220ENST00000581113 UBBP0CG47 229 aa2.72□□□□□ -1.97
NF1-220ENST00000581113 INAFM2P0DMQ5 153 aa2.72□□□□□ -1.97
NF1-220ENST00000581113 IGHV3-43DP0DP04 118 aa2.72□□□□□ -1.97
NF1-220ENST00000581113 COX6A1P12074 109 aa2.72□□□□□ -1.97
NF1-220ENST00000581113 APLNRP35414 380 aa2.72□□□□□ -1.97
NF1-220ENST00000581113 TALDO1P37837 337 aa2.72□□□□□ -1.97
NF1-220ENST00000581113 MP68P56378 58 aa2.72□□□□□ -1.97
NF1-220ENST00000581113 SNRPD2P62316 118 aaKnown RBP2.72□□□□□ -1.97
NF1-220ENST00000581113 RPL23P62829 140 aaKnown RBP2.72□□□□□ -1.97
NF1-220ENST00000581113 GRB2P62993 217 aaKnown RBP2.72□□□□□ -1.97
NF1-220ENST00000581113 FABP5Q01469 135 aa2.72□□□□□ -1.97
NF1-220ENST00000581113 GRK1Q15835 563 aa2.72□□□□□ -1.97
NF1-220ENST00000581113 ZNF404Q494X3 552 aa2.72□□□□□ -1.97
NF1-220ENST00000581113 TOMM20LQ6UXN7 152 aa2.72□□□□□ -1.97
NF1-220ENST00000581113 MARCH3Q86UD3 253 aa2.72□□□□□ -1.97
NF1-220ENST00000581113 YIPF7Q8N8F6 280 aa2.72□□□□□ -1.97
NF1-220ENST00000581113 DCAKDQ8WVC6 231 aa2.72□□□□□ -1.97
NF1-220ENST00000581113 ROPN1LQ96C74 230 aa2.72□□□□□ -1.97
NF1-220ENST00000581113 AURKBQ96GD4 344 aaPredicted RBP2.72□□□□□ -1.97
NF1-220ENST00000581113 C14orf144Q96I85 54 aa2.72□□□□□ -1.97
NF1-220ENST00000581113 ANAPC13Q9BS18 74 aa2.72□□□□□ -1.97
NF1-220ENST00000581113 CXorf21Q9HAI6 301 aa2.72□□□□□ -1.97
NF1-220ENST00000581113 ACER3Q9NUN7 267 aa2.72□□□□□ -1.97
NF1-220ENST00000581113 MED13Q9UHV7 2174 aa2.72□□□□□ -1.97
NF1-220ENST00000581113 SPTAN1Q13813 2472 aaKnown RBP2.72□□□□□ -1.97
NF1-220ENST00000581113 RP1L1Q8IWN7 2480 aaPredicted RBP2.72□□□□□ -1.97
NF1-220ENST00000581113 TNRC6AQ8NDV7 1962 aaKnown RBP2.72□□□□□ -1.97
NF1-220ENST00000581113 NOTCH2Q04721 2471 aa2.72□□□□□ -1.97
NF1-220ENST00000581113 TRAV17A0A0B4J275 112 aa2.71□□□□□ -1.97
NF1-220ENST00000581113 C9orf170A2RU37 121 aa2.71□□□□□ -1.97
NF1-220ENST00000581113 C5orf63A6NC05 138 aa2.71□□□□□ -1.97
NF1-220ENST00000581113 OR5H14A6NHG9 310 aa2.71□□□□□ -1.97
NF1-220ENST00000581113 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP2.71□□□□□ -1.97
NF1-220ENST00000581113 H7C1C5 153 aa2.71□□□□□ -1.97
NF1-220ENST00000581113 COPEO14579 308 aa2.71□□□□□ -1.97
NF1-220ENST00000581113 GYG2O15488 501 aa2.71□□□□□ -1.97
NF1-220ENST00000581113 GNG7O60262 68 aa2.71□□□□□ -1.97
NF1-220ENST00000581113 CDS2O95674 445 aa2.71□□□□□ -1.97
NF1-220ENST00000581113 STATHP02808 62 aa2.71□□□□□ -1.97
NF1-220ENST00000581113 C8GP07360 202 aa2.71□□□□□ -1.97
NF1-220ENST00000581113 UQCRHP07919 91 aa2.71□□□□□ -1.97
NF1-220ENST00000581113 SPI1P17947 270 aa2.71□□□□□ -1.97
NF1-220ENST00000581113 ORM2P19652 201 aa2.71□□□□□ -1.97
NF1-220ENST00000581113 CDK2P24941 298 aa2.71□□□□□ -1.97
NF1-220ENST00000581113 S100A2P29034 98 aa2.71□□□□□ -1.97
NF1-220ENST00000581113 IMPA1P29218 277 aa2.71□□□□□ -1.97
NF1-220ENST00000581113 BLVRBP30043 206 aaPredicted RBP2.71□□□□□ -1.97
NF1-220ENST00000581113 UBE2NP61088 152 aaKnown RBP2.71□□□□□ -1.97
NF1-220ENST00000581113 LCN6P62502 163 aa2.71□□□□□ -1.97
NF1-220ENST00000581113 ERCC8Q13216 396 aa2.71□□□□□ -1.97
NF1-220ENST00000581113 ARL9Q6T311 187 aa2.71□□□□□ -1.97
NF1-220ENST00000581113 SBSNQ6UWP8 590 aa2.71□□□□□ -1.97
NF1-220ENST00000581113 HRCT1Q6UXD1 115 aa2.71□□□□□ -1.97
NF1-220ENST00000581113 C20orf196Q8IYI0 205 aa2.71□□□□□ -1.97
NF1-220ENST00000581113 DRAM1Q8N682 238 aa2.71□□□□□ -1.97
NF1-220ENST00000581113 OR2T27Q8NH04 317 aa2.71□□□□□ -1.97
NF1-220ENST00000581113 OR4S2Q8NH73 311 aa2.71□□□□□ -1.97
NF1-220ENST00000581113 TWIST2Q8WVJ9 160 aa2.71□□□□□ -1.97
NF1-220ENST00000581113 TMEM158Q8WZ71 300 aa2.71□□□□□ -1.97
NF1-220ENST00000581113 OR5P3Q8WZ94 311 aa2.71□□□□□ -1.97
NF1-220ENST00000581113 PSMF1Q92530 271 aa2.71□□□□□ -1.97
NF1-220ENST00000581113 SLC35G5Q96KT7 338 aa2.71□□□□□ -1.97
NF1-220ENST00000581113 ZNF382Q96SR6 550 aa2.71□□□□□ -1.97
NF1-220ENST00000581113 THTPAQ9BU02 230 aa2.71□□□□□ -1.97
NF1-220ENST00000581113 SAMD10Q9BYL1 202 aa2.71□□□□□ -1.97
NF1-220ENST00000581113 YIPF3Q9GZM5 350 aa2.71□□□□□ -1.97
NF1-220ENST00000581113 C20orf27Q9GZN8 174 aa2.71□□□□□ -1.97
NF1-220ENST00000581113 SH3BGRL3Q9H299 93 aa2.71□□□□□ -1.97
NF1-220ENST00000581113 NOX3Q9HBY0 568 aa2.71□□□□□ -1.97
NF1-220ENST00000581113 TRAPPC2LQ9UL33 140 aa2.71□□□□□ -1.97
NF1-220ENST00000581113 ANAPC10Q9UM13 185 aa2.71□□□□□ -1.97
NF1-220ENST00000581113 CYSLTR1Q9Y271 337 aa2.71□□□□□ -1.97
NF1-220ENST00000581113 U3KQ87 197 aa2.71□□□□□ -1.97
NF1-220ENST00000581113 SHANK1Q9Y566 2161 aa2.71□□□□□ -1.98
NF1-220ENST00000581113 SPTBN1Q01082 2364 aaKnown RBP2.71□□□□□ -1.98
NF1-220ENST00000581113 PIKFYVEQ9Y2I7 2098 aa2.71□□□□□ -1.98
NF1-220ENST00000581113 DOPEY1Q5JWR5 2465 aa2.71□□□□□ -1.98
NF1-220ENST00000581113 ESPL1Q14674 2120 aa2.71□□□□□ -1.98
NF1-220ENST00000581113 MEIKINA0A087WXM9 373 aa2.71□□□□□ -1.98
NF1-220ENST00000581113 IGHV2-26A0A0B4J1V2 119 aa2.71□□□□□ -1.98
NF1-220ENST00000581113 LOC102725191A0A1B0GVB3 256 aa2.71□□□□□ -1.98
NF1-220ENST00000581113 A8MT66 165 aa2.71□□□□□ -1.98
NF1-220ENST00000581113 UPK2O00526 184 aa2.71□□□□□ -1.98
NF1-220ENST00000581113 TCF21O43680 179 aa2.71□□□□□ -1.98
NF1-220ENST00000581113 BANF1O75531 89 aa2.71□□□□□ -1.98
NF1-220ENST00000581113 CRYBA1P05813 215 aa2.71□□□□□ -1.98
NF1-220ENST00000581113 SMIM6P0DI80 62 aa2.71□□□□□ -1.98
NF1-220ENST00000581113 SMIM17P0DL12 118 aa2.71□□□□□ -1.98
NF1-220ENST00000581113 OR12D1P0DN82 309 aa2.71□□□□□ -1.98
NF1-220ENST00000581113 CRISP2P16562 243 aa2.71□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms