RNA–Protein interactions for RNA: ENST00000578664.1

GAPLINC-201, gastric adenocarcinoma associated, positive CD44 regulator, long intergenic non-coding RNA, humanhuman

TSL 3

Gene GAPLINC, Length 440 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPLINC-201ENST00000578664 TIFABQ6ZNK6 161 aa2.97□□□□□ -1.93
GAPLINC-201ENST00000578664 C3orf62Q6ZUJ4 267 aa2.97□□□□□ -1.93
GAPLINC-201ENST00000578664 KTN1-AS1Q86SY8 53 aa2.97□□□□□ -1.93
GAPLINC-201ENST00000578664 WDR86Q86TI4 376 aa2.97□□□□□ -1.93
GAPLINC-201ENST00000578664 IFT20Q8IY31 132 aa2.97□□□□□ -1.93
GAPLINC-201ENST00000578664 POM121L12Q8N7R1 296 aa2.97□□□□□ -1.93
GAPLINC-201ENST00000578664 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP2.97□□□□□ -1.93
GAPLINC-201ENST00000578664 SLC30A7Q8NEW0 376 aa2.97□□□□□ -1.93
GAPLINC-201ENST00000578664 OR51T1Q8NGJ9 327 aa2.97□□□□□ -1.93
GAPLINC-201ENST00000578664 LINC01006Q8NI28 216 aa2.97□□□□□ -1.93
GAPLINC-201ENST00000578664 C2orf15Q8WU43 125 aaKnown RBP2.97□□□□□ -1.93
GAPLINC-201ENST00000578664 ISOC1Q96CN7 298 aa2.97□□□□□ -1.93
GAPLINC-201ENST00000578664 IP6K3Q96PC2 410 aa2.97□□□□□ -1.93
GAPLINC-201ENST00000578664 OR2J1Q9GZK6 312 aa2.97□□□□□ -1.93
GAPLINC-201ENST00000578664 C11orf68Q9H3H3 251 aaKnown RBP2.97□□□□□ -1.93
GAPLINC-201ENST00000578664 ZNF286AQ9HBT8 521 aa2.97□□□□□ -1.93
GAPLINC-201ENST00000578664 KLK5Q9Y337 293 aaPredicted RBP2.97□□□□□ -1.93
GAPLINC-201ENST00000578664 PRSS21Q9Y6M0 314 aa2.97□□□□□ -1.93
GAPLINC-201ENST00000578664 CACNA1IQ9P0X4 2223 aa2.97□□□□□ -1.93
GAPLINC-201ENST00000578664 ITPR1Q14643 2758 aa2.97□□□□□ -1.93
GAPLINC-201ENST00000578664 CACNA1BQ00975 2339 aa2.97□□□□□ -1.93
GAPLINC-201ENST00000578664 EP300Q09472 2414 aaPredicted RBP2.97□□□□□ -1.93
GAPLINC-201ENST00000578664 MYH9P35579 1960 aaKnown RBP2.96□□□□□ -1.94
GAPLINC-201ENST00000578664 MIA3Q5JRA6 1907 aa2.96□□□□□ -1.94
GAPLINC-201ENST00000578664 IGHV3-49A0A0A0MS15 119 aa2.96□□□□□ -1.94
GAPLINC-201ENST00000578664 LOC102725191A0A1B0GVB3 256 aa2.96□□□□□ -1.94
GAPLINC-201ENST00000578664 TRDV1A0A1B0GX56 115 aa2.96□□□□□ -1.94
GAPLINC-201ENST00000578664 K7ERU9 68 aa2.96□□□□□ -1.94
GAPLINC-201ENST00000578664 SMIM17P0DL12 118 aa2.96□□□□□ -1.94
GAPLINC-201ENST00000578664 BCL2P10415 239 aa2.96□□□□□ -1.94
GAPLINC-201ENST00000578664 CASP1P29466 404 aa2.96□□□□□ -1.94
GAPLINC-201ENST00000578664 GABRA2P47869 451 aa2.96□□□□□ -1.94
GAPLINC-201ENST00000578664 RRAS2P62070 204 aaPredicted RBP2.96□□□□□ -1.94
GAPLINC-201ENST00000578664 PDGFRLQ15198 375 aa2.96□□□□□ -1.94
GAPLINC-201ENST00000578664 LUZP6Q538Z0 58 aa2.96□□□□□ -1.94
GAPLINC-201ENST00000578664 FAM78AQ5JUQ0 283 aa2.96□□□□□ -1.94
GAPLINC-201ENST00000578664 LAIR2Q6ISS4 152 aa2.96□□□□□ -1.94
GAPLINC-201ENST00000578664 KRTAP5-3Q6L8H2 238 aa2.96□□□□□ -1.94
GAPLINC-201ENST00000578664 NTM-AS1Q6ZSK4 140 aa2.96□□□□□ -1.94
GAPLINC-201ENST00000578664 SCXQ7RTU7 201 aa2.96□□□□□ -1.94
GAPLINC-201ENST00000578664 H1FOOQ8IZA3 346 aaPredicted RBP2.96□□□□□ -1.94
GAPLINC-201ENST00000578664 OR8I2Q8N0Y5 310 aa2.96□□□□□ -1.94
GAPLINC-201ENST00000578664 TMEM229BQ8NBD8 167 aa2.96□□□□□ -1.94
GAPLINC-201ENST00000578664 OR4C6Q8NH72 309 aa2.96□□□□□ -1.94
GAPLINC-201ENST00000578664 RAB2BQ8WUD1 216 aa2.96□□□□□ -1.94
GAPLINC-201ENST00000578664 NRTNQ99748 197 aa2.96□□□□□ -1.94
GAPLINC-201ENST00000578664 TM2D3Q9BRN9 247 aa2.96□□□□□ -1.94
GAPLINC-201ENST00000578664 HDHD3Q9BSH5 251 aaPredicted RBP2.96□□□□□ -1.94
GAPLINC-201ENST00000578664 SHANK2-AS3Q9BTD1 123 aa2.96□□□□□ -1.94
GAPLINC-201ENST00000578664 C1QTNF6Q9BXI9 259 aa2.96□□□□□ -1.94
GAPLINC-201ENST00000578664 NKX6-2Q9C056 277 aaPredicted RBP2.96□□□□□ -1.94
GAPLINC-201ENST00000578664 POPDC3Q9HBV1 291 aa2.96□□□□□ -1.94
GAPLINC-201ENST00000578664 U3KQ87 197 aa2.96□□□□□ -1.94
GAPLINC-201ENST00000578664 BAHCC1Q9P281 2608 aa2.96□□□□□ -1.94
GAPLINC-201ENST00000578664 DOCK8Q8NF50 2099 aa2.96□□□□□ -1.94
GAPLINC-201ENST00000578664 CEP250Q9BV73 2442 aa2.95□□□□□ -1.94
GAPLINC-201ENST00000578664 NCOR2Q9Y618 2525 aa2.95□□□□□ -1.94
GAPLINC-201ENST00000578664 USP24Q9UPU5 2620 aa2.95□□□□□ -1.94
GAPLINC-201ENST00000578664 MAP1BP46821 2468 aaKnown RBP2.95□□□□□ -1.94
GAPLINC-201ENST00000578664 CHD8Q9HCK8 2581 aa2.95□□□□□ -1.94
GAPLINC-201ENST00000578664 OTOGLQ3ZCN5 2332 aa2.95□□□□□ -1.94
GAPLINC-201ENST00000578664 A0A087X0T9 212 aa2.95□□□□□ -1.94
GAPLINC-201ENST00000578664 IGHV3-43A0A0B4J1X8 118 aa2.95□□□□□ -1.94
GAPLINC-201ENST00000578664 IGKV1-12A0A0C4DH73 117 aa2.95□□□□□ -1.94
GAPLINC-201ENST00000578664 C9orf170A2RU37 121 aa2.95□□□□□ -1.94
GAPLINC-201ENST00000578664 C9JCJ5 164 aa2.95□□□□□ -1.94
GAPLINC-201ENST00000578664 CLDN25C9JDP6 229 aa2.95□□□□□ -1.94
GAPLINC-201ENST00000578664 TRAF3IP2O43734 574 aaPredicted RBP2.95□□□□□ -1.94
GAPLINC-201ENST00000578664 CDS2O95674 445 aa2.95□□□□□ -1.94
GAPLINC-201ENST00000578664 IGF2P01344 180 aa2.95□□□□□ -1.94
GAPLINC-201ENST00000578664 IGKV1D-12P01611 117 aa2.95□□□□□ -1.94
GAPLINC-201ENST00000578664 IGLV3-25P01717 112 aa2.95□□□□□ -1.94
GAPLINC-201ENST00000578664 SRP19P09132 144 aaKnown RBP2.95□□□□□ -1.94
GAPLINC-201ENST00000578664 TLX1NBP0CAT3 122 aa2.95□□□□□ -1.94
GAPLINC-201ENST00000578664 P0DMU3 169 aa2.95□□□□□ -1.94
GAPLINC-201ENST00000578664 FAM231AP0DMU4 169 aa2.95□□□□□ -1.94
GAPLINC-201ENST00000578664 FAM231CP0DMU5 169 aa2.95□□□□□ -1.94
GAPLINC-201ENST00000578664 PTHLHP12272 177 aa2.95□□□□□ -1.94
GAPLINC-201ENST00000578664 ZNF32P17041 273 aa2.95□□□□□ -1.94
GAPLINC-201ENST00000578664 S100A2P29034 98 aa2.95□□□□□ -1.94
GAPLINC-201ENST00000578664 CD52P31358 61 aa2.95□□□□□ -1.94
GAPLINC-201ENST00000578664 RBMXP38159 391 aaKnown RBP2.95□□□□□ -1.94
GAPLINC-201ENST00000578664 EVX1P49640 407 aa2.95□□□□□ -1.94
GAPLINC-201ENST00000578664 KLF3P57682 345 aaPredicted RBP2.95□□□□□ -1.94
GAPLINC-201ENST00000578664 TAS2R45P59539 299 aa2.95□□□□□ -1.94
GAPLINC-201ENST00000578664 HBA1P69905 142 aa2.95□□□□□ -1.94
GAPLINC-201ENST00000578664 UBE2SQ16763 222 aa2.95□□□□□ -1.94
GAPLINC-201ENST00000578664 HIGD2BQ4VC39 106 aa2.95□□□□□ -1.94
GAPLINC-201ENST00000578664 ZC2HC1BQ5TFG8 222 aa2.95□□□□□ -1.94
GAPLINC-201ENST00000578664 FAM104BQ5XKR9 115 aa2.95□□□□□ -1.94
GAPLINC-201ENST00000578664 SLC25A34Q6PIV7 304 aa2.95□□□□□ -1.94
GAPLINC-201ENST00000578664 GPHB5Q86YW7 130 aa2.95□□□□□ -1.94
GAPLINC-201ENST00000578664 PRR15Q8IV56 129 aa2.95□□□□□ -1.94
GAPLINC-201ENST00000578664 C10orf126Q8N4M7 172 aa2.95□□□□□ -1.94
GAPLINC-201ENST00000578664 Q8N9P0 234 aaPredicted RBP2.95□□□□□ -1.94
GAPLINC-201ENST00000578664 ACOT12Q8WYK0 555 aa2.95□□□□□ -1.94
GAPLINC-201ENST00000578664 MAL2Q969L2 176 aa2.95□□□□□ -1.94
GAPLINC-201ENST00000578664 NARS2Q96I59 477 aaKnown RBP2.95□□□□□ -1.94
GAPLINC-201ENST00000578664 OR2D2Q9H210 308 aa2.95□□□□□ -1.94
GAPLINC-201ENST00000578664 ERG28Q9UKR5 140 aa2.95□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms