RNA–Protein interactions for RNA: ENST00000575909.1

TOM1L1-222, Transcript of target of myb1 like 1 membrane trafficking protein, human

TSL 3

Gene TOM1L1, Length 708 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TOM1L1-222	ENST00000575909	EXOC3-AS1	Q8N2X6	119 aa		4.15	□□□□□ -1.75
TOM1L1-222	ENST00000575909	OR4X2	Q8NGF9	303 aa		4.15	□□□□□ -1.75
TOM1L1-222	ENST00000575909	SCGB1C1	Q8TD33	95 aa		4.15	□□□□□ -1.75
TOM1L1-222	ENST00000575909	RPS4Y2	Q8TD47	263 aa		4.15	□□□□□ -1.75
TOM1L1-222	ENST00000575909	YPEL4	Q96NS1	127 aa		4.15	□□□□□ -1.75
TOM1L1-222	ENST00000575909	GNB1L	Q9BYB4	327 aa		4.15	□□□□□ -1.75
TOM1L1-222	ENST00000575909	EIF5A2	Q9GZV4	153 aa	Known RBP	4.15	□□□□□ -1.75
TOM1L1-222	ENST00000575909	PARP12	Q9H0J9	701 aa	Known RBP	4.15	□□□□□ -1.75
TOM1L1-222	ENST00000575909	ST20	Q9HBF5	79 aa		4.15	□□□□□ -1.75
TOM1L1-222	ENST00000575909	TVP23B	Q9NYZ1	205 aa		4.15	□□□□□ -1.75
TOM1L1-222	ENST00000575909	ZSWIM8	A7E2V4	1837 aa		4.15	□□□□□ -1.75
TOM1L1-222	ENST00000575909	CUX1	P39880	1505 aa		4.15	□□□□□ -1.75
TOM1L1-222	ENST00000575909	POLR1A	O95602	1720 aa	Predicted RBP	4.15	□□□□□ -1.75
TOM1L1-222	ENST00000575909	PTPRF	P10586	1907 aa		4.15	□□□□□ -1.75
TOM1L1-222	ENST00000575909	LAMB4	A4D0S4	1761 aa		4.14	□□□□□ -1.75
TOM1L1-222	ENST00000575909	PTPRK	Q15262	1439 aa		4.14	□□□□□ -1.75
TOM1L1-222	ENST00000575909	TNS2	Q63HR2	1409 aa		4.14	□□□□□ -1.75
TOM1L1-222	ENST00000575909	CFTR	P13569	1480 aa		4.14	□□□□□ -1.75
TOM1L1-222	ENST00000575909		H3BRM9	83 aa		4.14	□□□□□ -1.75
TOM1L1-222	ENST00000575909	CCDC179	H3BU77	68 aa		4.14	□□□□□ -1.75
TOM1L1-222	ENST00000575909	UPK2	O00526	184 aa		4.14	□□□□□ -1.75
TOM1L1-222	ENST00000575909	LYZL6	O75951	148 aa		4.14	□□□□□ -1.75
TOM1L1-222	ENST00000575909	TRGC1	P0CF51	173 aa		4.14	□□□□□ -1.75
TOM1L1-222	ENST00000575909	PGA5	P0DJD9	388 aa		4.14	□□□□□ -1.75
TOM1L1-222	ENST00000575909	CTLA4	P16410	223 aa		4.14	□□□□□ -1.75
TOM1L1-222	ENST00000575909	RND2	P52198	227 aa		4.14	□□□□□ -1.75
TOM1L1-222	ENST00000575909	ZNF136	P52737	540 aa		4.14	□□□□□ -1.75
TOM1L1-222	ENST00000575909	ZNF90	Q03938	601 aa		4.14	□□□□□ -1.75
TOM1L1-222	ENST00000575909	PMCHL1	Q16048	86 aa		4.14	□□□□□ -1.75
TOM1L1-222	ENST00000575909	RTL8B	Q17RB0	113 aa		4.14	□□□□□ -1.75
TOM1L1-222	ENST00000575909	VMA21	Q3ZAQ7	101 aa		4.14	□□□□□ -1.75
TOM1L1-222	ENST00000575909	FKBP1C	Q5VVH2	108 aa		4.14	□□□□□ -1.75
TOM1L1-222	ENST00000575909		Q5XG85	94 aa		4.14	□□□□□ -1.75
TOM1L1-222	ENST00000575909	ZNF660	Q6AZW8	331 aa	Predicted RBP	4.14	□□□□□ -1.75
TOM1L1-222	ENST00000575909		Q6ZUT4	128 aa		4.14	□□□□□ -1.75
TOM1L1-222	ENST00000575909	MSRB3	Q8IXL7	192 aa		4.14	□□□□□ -1.75
TOM1L1-222	ENST00000575909	OR52P1P	Q8NH57	321 aa		4.14	□□□□□ -1.75
TOM1L1-222	ENST00000575909	C2orf15	Q8WU43	125 aa	Known RBP	4.14	□□□□□ -1.75
TOM1L1-222	ENST00000575909	LINC01587	Q99440	93 aa		4.14	□□□□□ -1.75
TOM1L1-222	ENST00000575909	TBL1Y	Q9BQ87	522 aa		4.14	□□□□□ -1.75
TOM1L1-222	ENST00000575909	PMCHL2	Q9BQD1	86 aa		4.14	□□□□□ -1.75
TOM1L1-222	ENST00000575909	CA10	Q9NS85	328 aa		4.14	□□□□□ -1.75
TOM1L1-222	ENST00000575909	AK3	Q9UIJ7	227 aa		4.14	□□□□□ -1.75
TOM1L1-222	ENST00000575909	TRPM3	Q9HCF6	1732 aa	Predicted RBP	4.14	□□□□□ -1.75
TOM1L1-222	ENST00000575909	GLI3	P10071	1580 aa		4.14	□□□□□ -1.75
TOM1L1-222	ENST00000575909	NRK	Q7Z2Y5	1582 aa		4.14	□□□□□ -1.75
TOM1L1-222	ENST00000575909	CUL7	Q14999	1698 aa		4.13	□□□□□ -1.75
TOM1L1-222	ENST00000575909	NCKAP5	O14513	1909 aa		4.13	□□□□□ -1.75
TOM1L1-222	ENST00000575909	LTN1	O94822	1766 aa		4.13	□□□□□ -1.75
TOM1L1-222	ENST00000575909	TRAV4	A0A0B4J268	109 aa		4.13	□□□□□ -1.75
TOM1L1-222	ENST00000575909	LOC107984640	A0A0U1RRK4	108 aa		4.13	□□□□□ -1.75
TOM1L1-222	ENST00000575909	ARRDC5	A6NEK1	342 aa		4.13	□□□□□ -1.75
TOM1L1-222	ENST00000575909	OR2T8	A6NH00	312 aa		4.13	□□□□□ -1.75
TOM1L1-222	ENST00000575909	NDUFC2-KCTD14	E9PQ53	114 aa		4.13	□□□□□ -1.75
TOM1L1-222	ENST00000575909	LINC01619	G3V211	115 aa		4.13	□□□□□ -1.75
TOM1L1-222	ENST00000575909	GEMIN2	O14893	280 aa	Known RBP	4.13	□□□□□ -1.75
TOM1L1-222	ENST00000575909	GSTZ1	O43708	216 aa	Predicted RBP	4.13	□□□□□ -1.75
TOM1L1-222	ENST00000575909	SFT2D2	O95562	160 aa		4.13	□□□□□ -1.75
TOM1L1-222	ENST00000575909	HRAS	P01112	189 aa		4.13	□□□□□ -1.75
TOM1L1-222	ENST00000575909	EIF4E	P06730	217 aa	Known RBP	4.13	□□□□□ -1.75
TOM1L1-222	ENST00000575909	PGA4	P0DJD7	388 aa		4.13	□□□□□ -1.75
TOM1L1-222	ENST00000575909	IGLC2	P0DOY2	106 aa		4.13	□□□□□ -1.75
TOM1L1-222	ENST00000575909	IGLC3	P0DOY3	106 aa		4.13	□□□□□ -1.75
TOM1L1-222	ENST00000575909	ADCYAP1	P18509	176 aa		4.13	□□□□□ -1.75
TOM1L1-222	ENST00000575909	MDK	P21741	143 aa	Predicted RBP	4.13	□□□□□ -1.75
TOM1L1-222	ENST00000575909	UBE2A	P49459	152 aa		4.13	□□□□□ -1.75
TOM1L1-222	ENST00000575909	PSMB2	P49721	201 aa		4.13	□□□□□ -1.75
TOM1L1-222	ENST00000575909	YPEL3	P61236	119 aa	Predicted RBP	4.13	□□□□□ -1.75
TOM1L1-222	ENST00000575909	ZNF345	Q14585	488 aa		4.13	□□□□□ -1.75
TOM1L1-222	ENST00000575909		Q56UQ5	140 aa		4.13	□□□□□ -1.75
TOM1L1-222	ENST00000575909	SH2D6	Q7Z4S9	175 aa		4.13	□□□□□ -1.75
TOM1L1-222	ENST00000575909	DAZ4	Q86SG3	579 aa	Known RBP	4.13	□□□□□ -1.75
TOM1L1-222	ENST00000575909	PRR15	Q8IV56	129 aa		4.13	□□□□□ -1.75
TOM1L1-222	ENST00000575909		Q8N7P7	452 aa		4.13	□□□□□ -1.75
TOM1L1-222	ENST00000575909	OR2T35	Q8NGX2	323 aa		4.13	□□□□□ -1.75
TOM1L1-222	ENST00000575909	OR4K13	Q8NH42	304 aa		4.13	□□□□□ -1.75
TOM1L1-222	ENST00000575909	OR4A5	Q8NH83	315 aa		4.13	□□□□□ -1.75
TOM1L1-222	ENST00000575909	VSTM2A	Q8TAG5	236 aa		4.13	□□□□□ -1.75
TOM1L1-222	ENST00000575909	LINC00526	Q96FQ7	95 aa		4.13	□□□□□ -1.75
TOM1L1-222	ENST00000575909	SLC25A44	Q96H78	314 aa	Predicted RBP	4.13	□□□□□ -1.75
TOM1L1-222	ENST00000575909	SLC25A2	Q9BXI2	301 aa		4.13	□□□□□ -1.75
TOM1L1-222	ENST00000575909	DAZ1	Q9NQZ3	744 aa	Known RBP	4.13	□□□□□ -1.75
TOM1L1-222	ENST00000575909	TMEM100	Q9NV29	134 aa		4.13	□□□□□ -1.75
TOM1L1-222	ENST00000575909	ZNF257	Q9Y2Q1	563 aa		4.13	□□□□□ -1.75
TOM1L1-222	ENST00000575909	LINC00312	Q9Y6C7	94 aa		4.13	□□□□□ -1.75
TOM1L1-222	ENST00000575909	KIF13B	Q9NQT8	1826 aa		4.13	□□□□□ -1.75
TOM1L1-222	ENST00000575909	ABCA8	O94911	1581 aa		4.13	□□□□□ -1.75
TOM1L1-222	ENST00000575909	SETBP1	Q9Y6X0	1596 aa		4.13	□□□□□ -1.75
TOM1L1-222	ENST00000575909	TARBP1	Q13395	1621 aa	Known RBP	4.13	□□□□□ -1.75
TOM1L1-222	ENST00000575909	TECPR2	O15040	1411 aa		4.12	□□□□□ -1.75
TOM1L1-222	ENST00000575909	CRB1	P82279	1406 aa		4.12	□□□□□ -1.75
TOM1L1-222	ENST00000575909	CCL15-CCL14	A0A0B4J2E2	113 aa		4.12	□□□□□ -1.75
TOM1L1-222	ENST00000575909	C3orf85	A0A1B0GTC6	90 aa		4.12	□□□□□ -1.75
TOM1L1-222	ENST00000575909	IZUMO1R	A6ND01	250 aa		4.12	□□□□□ -1.75
TOM1L1-222	ENST00000575909		J3QT63	122 aa		4.12	□□□□□ -1.75
TOM1L1-222	ENST00000575909	APOC4-APOC2	K7ER74	178 aa		4.12	□□□□□ -1.75
TOM1L1-222	ENST00000575909	LYRM1	O43325	122 aa		4.12	□□□□□ -1.75
TOM1L1-222	ENST00000575909	PROSC	O94903	275 aa		4.12	□□□□□ -1.75
TOM1L1-222	ENST00000575909	SIX6	O95475	246 aa		4.12	□□□□□ -1.75
TOM1L1-222	ENST00000575909	APOC2	P02655	101 aa		4.12	□□□□□ -1.75

Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms