RNA–Protein interactions for RNA: ENST00000572205.5

SMG6-210, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 4

Gene SMG6, Length 551 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-210ENST00000572205 TMEM116Q8NCL8 245 aa6.47□□□□□ -1.37
SMG6-210ENST00000572205 OR4X1Q8NH49 305 aa6.47□□□□□ -1.37
SMG6-210ENST00000572205 MARC2Q969Z3 335 aa6.47□□□□□ -1.37
SMG6-210ENST00000572205 PINX1Q96BK5 328 aaKnown RBP6.47□□□□□ -1.37
SMG6-210ENST00000572205 SCGB3A2Q96PL1 93 aa6.47□□□□□ -1.37
SMG6-210ENST00000572205 C7orf50Q9BRJ6 194 aaKnown RBP6.47□□□□□ -1.37
SMG6-210ENST00000572205 VSIRQ9H7M9 311 aa6.47□□□□□ -1.37
SMG6-210ENST00000572205 MRPL27Q9P0M9 148 aaKnown RBP6.47□□□□□ -1.37
SMG6-210ENST00000572205 AGRNO00468 2067 aa6.46□□□□□ -1.37
SMG6-210ENST00000572205 IGKV1OR2-108A0A075B7D4 117 aa6.46□□□□□ -1.38
SMG6-210ENST00000572205 IGHV7-4-1A0A0J9YVY3 117 aa6.46□□□□□ -1.38
SMG6-210ENST00000572205 CORTO00230 105 aa6.46□□□□□ -1.38
SMG6-210ENST00000572205 CHEK1O14757 476 aa6.46□□□□□ -1.38
SMG6-210ENST00000572205 TSPAN4O14817 238 aa6.46□□□□□ -1.38
SMG6-210ENST00000572205 LYRM1O43325 122 aa6.46□□□□□ -1.38
SMG6-210ENST00000572205 ZNF207O43670 478 aaKnown RBP6.46□□□□□ -1.38
SMG6-210ENST00000572205 NPY1RP25929 384 aa6.46□□□□□ -1.38
SMG6-210ENST00000572205 HTR2BP41595 481 aa6.46□□□□□ -1.38
SMG6-210ENST00000572205 CD81P60033 236 aa6.46□□□□□ -1.38
SMG6-210ENST00000572205 ERHP84090 104 aaKnown RBP6.46□□□□□ -1.38
SMG6-210ENST00000572205 FAM106AQ4KMX7 169 aa6.46□□□□□ -1.38
SMG6-210ENST00000572205 Q56UQ5 140 aa6.46□□□□□ -1.38
SMG6-210ENST00000572205 GGNBP1Q5YKI7 109 aa6.46□□□□□ -1.38
SMG6-210ENST00000572205 TRIQKQ629K1 86 aa6.46□□□□□ -1.38
SMG6-210ENST00000572205 UBAC2Q8NBM4 344 aa6.46□□□□□ -1.38
SMG6-210ENST00000572205 OR52B4Q8NGK2 314 aa6.46□□□□□ -1.38
SMG6-210ENST00000572205 OR4D5Q8NGN0 318 aa6.46□□□□□ -1.38
SMG6-210ENST00000572205 DTD1Q8TEA8 209 aa6.46□□□□□ -1.38
SMG6-210ENST00000572205 RNF2Q99496 336 aa6.46□□□□□ -1.38
SMG6-210ENST00000572205 NEURL2Q9BR09 285 aa6.46□□□□□ -1.38
SMG6-210ENST00000572205 CCDC32Q9BV29 185 aa6.46□□□□□ -1.38
SMG6-210ENST00000572205 C1orf43Q9BWL3 253 aa6.46□□□□□ -1.38
SMG6-210ENST00000572205 C20orf85Q9H1P6 137 aa6.46□□□□□ -1.38
SMG6-210ENST00000572205 PTTG2Q9NZH5 202 aa6.46□□□□□ -1.38
SMG6-210ENST00000572205 SMPXQ9UHP9 88 aa6.46□□□□□ -1.38
SMG6-210ENST00000572205 UFC1Q9Y3C8 167 aa6.46□□□□□ -1.38
SMG6-210ENST00000572205 TRAV25A0A0B4J276 109 aa6.45□□□□□ -1.38
SMG6-210ENST00000572205 LINC00854A0A1B0GVQ3 168 aa6.45□□□□□ -1.38
SMG6-210ENST00000572205 ZNF320A2RRD8 509 aa6.45□□□□□ -1.38
SMG6-210ENST00000572205 PMS2P5A8MQ11 134 aa6.45□□□□□ -1.38
SMG6-210ENST00000572205 FAM90A26D6RGX4 464 aa6.45□□□□□ -1.38
SMG6-210ENST00000572205 CYB5BO43169 146 aa6.45□□□□□ -1.38
SMG6-210ENST00000572205 OR4E1P0C645 316 aa6.45□□□□□ -1.38
SMG6-210ENST00000572205 NHLRC4P0CG21 123 aaPredicted RBP6.45□□□□□ -1.38
SMG6-210ENST00000572205 OPRK1P41145 380 aa6.45□□□□□ -1.38
SMG6-210ENST00000572205 RND2P52198 227 aa6.45□□□□□ -1.38
SMG6-210ENST00000572205 HAGHQ16775 308 aa6.45□□□□□ -1.38
SMG6-210ENST00000572205 TATDN3Q17R31 274 aa6.45□□□□□ -1.38
SMG6-210ENST00000572205 TIGITQ495A1 244 aa6.45□□□□□ -1.38
SMG6-210ENST00000572205 LYG2Q86SG7 212 aa6.45□□□□□ -1.38
SMG6-210ENST00000572205 DEFB125Q8N687 156 aa6.45□□□□□ -1.38
SMG6-210ENST00000572205 STPG3Q8N7X2 389 aa6.45□□□□□ -1.38
SMG6-210ENST00000572205 RNASE11Q8TAA1 199 aaKnown RBP6.45□□□□□ -1.38
SMG6-210ENST00000572205 RNASEH2CQ8TDP1 164 aaKnown RBP6.45□□□□□ -1.38
SMG6-210ENST00000572205 DYNLRB2Q8TF09 96 aa6.45□□□□□ -1.38
SMG6-210ENST00000572205 MITD1Q8WV92 249 aa6.45□□□□□ -1.38
SMG6-210ENST00000572205 ST8SIA2Q92186 375 aa6.45□□□□□ -1.38
SMG6-210ENST00000572205 C11orf1Q9H5F2 150 aa6.45□□□□□ -1.38
SMG6-210ENST00000572205 EDA2RQ9HAV5 297 aa6.45□□□□□ -1.38
SMG6-210ENST00000572205 PALMDQ9NP74 551 aa6.45□□□□□ -1.38
SMG6-210ENST00000572205 RCL1Q9Y2P8 373 aaKnown RBP6.45□□□□□ -1.38
SMG6-210ENST00000572205 KCNIP3Q9Y2W7 256 aa6.45□□□□□ -1.38
SMG6-210ENST00000572205 TMED3Q9Y3Q3 217 aa6.45□□□□□ -1.38
SMG6-210ENST00000572205 PUS1Q9Y606 427 aaKnown RBP eCLIP6.45□□□□□ -1.38
SMG6-210ENST00000572205 U3KQK5 164 aa6.45□□□□□ -1.38
SMG6-210ENST00000572205 IGHV3-49A0A0A0MS15 119 aa6.44□□□□□ -1.38
SMG6-210ENST00000572205 CEBPZOSA8MTT3 80 aa6.44□□□□□ -1.38
SMG6-210ENST00000572205 NUPL2O15504 423 aaKnown RBP6.44□□□□□ -1.38
SMG6-210ENST00000572205 GNG7O60262 68 aa6.44□□□□□ -1.38
SMG6-210ENST00000572205 ANXA3P12429 323 aa6.44□□□□□ -1.38
SMG6-210ENST00000572205 CRYBB3P26998 211 aa6.44□□□□□ -1.38
SMG6-210ENST00000572205 SNCAP37840 140 aa6.44□□□□□ -1.38
SMG6-210ENST00000572205 PAX9P55771 341 aa6.44□□□□□ -1.38
SMG6-210ENST00000572205 RELQ04864 619 aaPredicted RBP6.44□□□□□ -1.38
SMG6-210ENST00000572205 ASAH1Q13510 395 aa6.44□□□□□ -1.38
SMG6-210ENST00000572205 USF2Q15853 346 aaPredicted RBP6.44□□□□□ -1.38
SMG6-210ENST00000572205 ZNF600Q6ZNG1 722 aa6.44□□□□□ -1.38
SMG6-210ENST00000572205 SLC16A13Q7RTY0 426 aa6.44□□□□□ -1.38
SMG6-210ENST00000572205 FAM24BQ8N5W8 94 aa6.44□□□□□ -1.38
SMG6-210ENST00000572205 RCHY1Q96PM5 261 aa6.44□□□□□ -1.38
SMG6-210ENST00000572205 SPAG8Q99932 426 aaPredicted RBP6.44□□□□□ -1.38
SMG6-210ENST00000572205 PDCD10Q9BUL8 212 aa6.44□□□□□ -1.38
SMG6-210ENST00000572205 RHPN1-AS1Q9BWJ2 59 aa6.44□□□□□ -1.38
SMG6-210ENST00000572205 RETNQ9HD89 108 aa6.44□□□□□ -1.38
SMG6-210ENST00000572205 HEYLQ9NQ87 328 aaPredicted RBP6.44□□□□□ -1.38
SMG6-210ENST00000572205 GAR1Q9NY12 217 aaKnown RBP6.44□□□□□ -1.38
SMG6-210ENST00000572205 IGHV3OR16-13A0A075B7E8 117 aa6.43□□□□□ -1.38
SMG6-210ENST00000572205 IGHV3-74A0A0B4J1X5 117 aa6.43□□□□□ -1.38
SMG6-210ENST00000572205 CCNKO75909 580 aa6.43□□□□□ -1.38
SMG6-210ENST00000572205 TCRBP04435 133 aa6.43□□□□□ -1.38
SMG6-210ENST00000572205 HOXB5P09067 269 aa6.43□□□□□ -1.38
SMG6-210ENST00000572205 IAPPP10997 89 aa6.43□□□□□ -1.38
SMG6-210ENST00000572205 NPBWR1P48145 328 aa6.43□□□□□ -1.38
SMG6-210ENST00000572205 IL15RAQ13261 267 aa6.43□□□□□ -1.38
SMG6-210ENST00000572205 GAMTQ14353 236 aa6.43□□□□□ -1.38
SMG6-210ENST00000572205 ZNF124Q15973 351 aa6.43□□□□□ -1.38
SMG6-210ENST00000572205 DUSP18Q8NEJ0 188 aa6.43□□□□□ -1.38
SMG6-210ENST00000572205 C17orf77Q96MU5 243 aa6.43□□□□□ -1.38
SMG6-210ENST00000572205 FAM110AQ9BQ89 295 aa6.43□□□□□ -1.38
SMG6-210ENST00000572205 C20orf24Q9BUV8 137 aa6.43□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms