RNA–Protein interactions for RNA: ENST00000570937.1

NUP88-202, Transcript of nucleoporin 88, humanhuman

TSL 3

Gene NUP88, Length 361 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88-202ENST00000570937 ZNF256Q9Y2P7 627 aaPredicted RBP2.87□□□□□ -1.95
NUP88-202ENST00000570937 RBMX2Q9Y388 322 aaKnown RBP2.87□□□□□ -1.95
NUP88-202ENST00000570937 IGKV1D-8A0A087WSZ0 117 aa2.86□□□□□ -1.95
NUP88-202ENST00000570937 TRAV9-2A0A087WT02 112 aa2.86□□□□□ -1.95
NUP88-202ENST00000570937 A0A0G2JLM5 398 aa2.86□□□□□ -1.95
NUP88-202ENST00000570937 H3BUA1 57 aa2.86□□□□□ -1.95
NUP88-202ENST00000570937 J3QRK9 145 aa2.86□□□□□ -1.95
NUP88-202ENST00000570937 ZNF701M0R085 212 aaPredicted RBP2.86□□□□□ -1.95
NUP88-202ENST00000570937 CYB5BO43169 146 aa2.86□□□□□ -1.95
NUP88-202ENST00000570937 RBFOX2O43251 390 aaKnown RBP eCLIP2.86□□□□□ -1.95
NUP88-202ENST00000570937 HPGDSO60760 199 aa2.86□□□□□ -1.95
NUP88-202ENST00000570937 CRYZL1O95825 349 aa2.86□□□□□ -1.95
NUP88-202ENST00000570937 DHFRP00374 187 aa2.86□□□□□ -1.95
NUP88-202ENST00000570937 CA2P00918 260 aa2.86□□□□□ -1.95
NUP88-202ENST00000570937 IGHG4P01861 327 aa2.86□□□□□ -1.95
NUP88-202ENST00000570937 PMP2P02689 132 aa2.86□□□□□ -1.95
NUP88-202ENST00000570937 IGKV1-16P04430 117 aa2.86□□□□□ -1.95
NUP88-202ENST00000570937 EIF4EP06730 217 aaKnown RBP2.86□□□□□ -1.95
NUP88-202ENST00000570937 ELK1P19419 428 aa2.86□□□□□ -1.95
NUP88-202ENST00000570937 TBPP20226 339 aa2.86□□□□□ -1.95
NUP88-202ENST00000570937 HLA-DMAP28067 261 aa2.86□□□□□ -1.95
NUP88-202ENST00000570937 MAS1LP35410 378 aa2.86□□□□□ -1.95
NUP88-202ENST00000570937 RAB9AP51151 201 aa2.86□□□□□ -1.95
NUP88-202ENST00000570937 TAS2R19P59542 299 aa2.86□□□□□ -1.95
NUP88-202ENST00000570937 FXYD4P59646 89 aa2.86□□□□□ -1.95
NUP88-202ENST00000570937 UBE2KP61086 200 aa2.86□□□□□ -1.95
NUP88-202ENST00000570937 RGS21Q2M5E4 152 aa2.86□□□□□ -1.95
NUP88-202ENST00000570937 RNASE10Q5GAN6 216 aaKnown RBP2.86□□□□□ -1.95
NUP88-202ENST00000570937 AADACL3Q5VUY0 350 aa2.86□□□□□ -1.95
NUP88-202ENST00000570937 UNQ5815/PRO19632Q6UWF5 114 aa2.86□□□□□ -1.95
NUP88-202ENST00000570937 SNX29P2Q8IUI4 249 aa2.86□□□□□ -1.95
NUP88-202ENST00000570937 SLC38A6Q8IZM9 456 aa2.86□□□□□ -1.95
NUP88-202ENST00000570937 ARRDC1Q8N5I2 433 aa2.86□□□□□ -1.95
NUP88-202ENST00000570937 MINDY2Q8NBR6 621 aa2.86□□□□□ -1.95
NUP88-202ENST00000570937 WFDC9Q8NEX5 89 aa2.86□□□□□ -1.95
NUP88-202ENST00000570937 OR4A5Q8NH83 315 aa2.86□□□□□ -1.95
NUP88-202ENST00000570937 GRPEL2Q8TAA5 225 aa2.86□□□□□ -1.95
NUP88-202ENST00000570937 GPX8Q8TED1 209 aa2.86□□□□□ -1.95
NUP88-202ENST00000570937 C4orf3Q8WVX3 66 aa2.86□□□□□ -1.95
NUP88-202ENST00000570937 ARPC1AQ92747 370 aa2.86□□□□□ -1.95
NUP88-202ENST00000570937 DIRAS2Q96HU8 199 aa2.86□□□□□ -1.95
NUP88-202ENST00000570937 UBE2E2Q96LR5 201 aa2.86□□□□□ -1.95
NUP88-202ENST00000570937 CLCC1Q96S66 551 aa2.86□□□□□ -1.95
NUP88-202ENST00000570937 HSPB9Q9BQS6 159 aa2.86□□□□□ -1.95
NUP88-202ENST00000570937 ZNF2Q9BSG1 426 aaPredicted RBP2.86□□□□□ -1.95
NUP88-202ENST00000570937 C6orf62Q9GZU0 229 aaPredicted RBP2.86□□□□□ -1.95
NUP88-202ENST00000570937 FBXL15Q9H469 300 aa2.86□□□□□ -1.95
NUP88-202ENST00000570937 ZNF355PQ9NSJ1 428 aa2.86□□□□□ -1.95
NUP88-202ENST00000570937 CCDC59Q9P031 241 aaKnown RBP2.86□□□□□ -1.95
NUP88-202ENST00000570937 EXTL2Q9UBQ6 330 aa2.86□□□□□ -1.95
NUP88-202ENST00000570937 RSL24D1Q9UHA3 163 aaKnown RBP2.86□□□□□ -1.95
NUP88-202ENST00000570937 LINC00527Q9UJ94 153 aa2.86□□□□□ -1.95
NUP88-202ENST00000570937 CHTOPQ9Y3Y2 248 aaKnown RBP2.86□□□□□ -1.95
NUP88-202ENST00000570937 WSB1Q9Y6I7 421 aa2.86□□□□□ -1.95
NUP88-202ENST00000570937 TRAV6A0A075B6T7 132 aa2.85□□□□□ -1.95
NUP88-202ENST00000570937 IGHV7-81A0A0B4J1V7 117 aa2.85□□□□□ -1.95
NUP88-202ENST00000570937 PIGBOS1A0A0B4J2F0 54 aa2.85□□□□□ -1.95
NUP88-202ENST00000570937 C13orf42A0A1B0GVH6 325 aa2.85□□□□□ -1.95
NUP88-202ENST00000570937 MEIS3P1A6NDR6 274 aa2.85□□□□□ -1.95
NUP88-202ENST00000570937 FABP12A6NFH5 140 aa2.85□□□□□ -1.95
NUP88-202ENST00000570937 DISC1C4P0D8 188 aa2.85□□□□□ -1.95
NUP88-202ENST00000570937 G3V318 75 aa2.85□□□□□ -1.95
NUP88-202ENST00000570937 H3BMQ9 156 aa2.85□□□□□ -1.95
NUP88-202ENST00000570937 GABARAPH6UMI1 98 aa2.85□□□□□ -1.95
NUP88-202ENST00000570937 L7N2F9 121 aa2.85□□□□□ -1.95
NUP88-202ENST00000570937 GPR31O00270 319 aa2.85□□□□□ -1.95
NUP88-202ENST00000570937 FCN1O00602 326 aa2.85□□□□□ -1.95
NUP88-202ENST00000570937 SNAPC5O75971 98 aa2.85□□□□□ -1.95
NUP88-202ENST00000570937 ATG12O94817 140 aa2.85□□□□□ -1.95
NUP88-202ENST00000570937 OR2A4O95047 310 aa2.85□□□□□ -1.95
NUP88-202ENST00000570937 BRI3O95415 125 aa2.85□□□□□ -1.95
NUP88-202ENST00000570937 HPRT1P00492 218 aa2.85□□□□□ -1.95
NUP88-202ENST00000570937 IGLV2-23P01705 113 aa2.85□□□□□ -1.95
NUP88-202ENST00000570937 TRGV3P03979 118 aa2.85□□□□□ -1.95
NUP88-202ENST00000570937 FCER2P06734 321 aa2.85□□□□□ -1.95
NUP88-202ENST00000570937 SERPINE2P07093 398 aa2.85□□□□□ -1.95
NUP88-202ENST00000570937 OR8U8P0C7N1 319 aa2.85□□□□□ -1.95
NUP88-202ENST00000570937 PTHLHP12272 177 aa2.85□□□□□ -1.95
NUP88-202ENST00000570937 NQO2P16083 231 aa2.85□□□□□ -1.95
NUP88-202ENST00000570937 CNTFRP26992 372 aa2.85□□□□□ -1.95
NUP88-202ENST00000570937 PSMB8P28062 276 aa2.85□□□□□ -1.95
NUP88-202ENST00000570937 HRH1P35367 487 aa2.85□□□□□ -1.95
NUP88-202ENST00000570937 ID1P41134 155 aa2.85□□□□□ -1.95
NUP88-202ENST00000570937 RAB25P57735 213 aa2.85□□□□□ -1.95
NUP88-202ENST00000570937 TAS2R31P59538 309 aa2.85□□□□□ -1.95
NUP88-202ENST00000570937 AP3S2P59780 193 aa2.85□□□□□ -1.95
NUP88-202ENST00000570937 POLR2GP62487 172 aaKnown RBP eCLIP2.85□□□□□ -1.95
NUP88-202ENST00000570937 NDPQ00604 133 aa2.85□□□□□ -1.95
NUP88-202ENST00000570937 IL18Q14116 193 aa2.85□□□□□ -1.95
NUP88-202ENST00000570937 TNXAQ16473 311 aa2.85□□□□□ -1.95
NUP88-202ENST00000570937 PRSS8Q16651 343 aa2.85□□□□□ -1.95
NUP88-202ENST00000570937 TATDN3Q17R31 274 aa2.85□□□□□ -1.95
NUP88-202ENST00000570937 KRTAP13-3Q3SY46 172 aa2.85□□□□□ -1.95
NUP88-202ENST00000570937 VAX1Q5SQQ9 334 aa2.85□□□□□ -1.95
NUP88-202ENST00000570937 HSD17B13Q7Z5P4 300 aaPredicted RBP2.85□□□□□ -1.95
NUP88-202ENST00000570937 ZNF491Q8N8L2 437 aa2.85□□□□□ -1.95
NUP88-202ENST00000570937 TMEM229BQ8NBD8 167 aa2.85□□□□□ -1.95
NUP88-202ENST00000570937 LFNGQ8NES3 379 aa2.85□□□□□ -1.95
NUP88-202ENST00000570937 OR1N2Q8NGR9 330 aa2.85□□□□□ -1.95
NUP88-202ENST00000570937 TERB2Q8NHR7 220 aa2.85□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms