RNA–Protein interactions for RNA: ENST00000566808.2

CDH3-205, Transcript of cadherin 3, humanhuman

TSL 5

Gene CDH3, Length 573 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3-205ENST00000566808 FCER2P06734 321 aa11.7□□□□□ -0.54
CDH3-205ENST00000566808 SUB1P53999 127 aaKnown RBP eCLIP11.7□□□□□ -0.54
CDH3-205ENST00000566808 USF2Q15853 346 aaPredicted RBP11.7□□□□□ -0.54
CDH3-205ENST00000566808 SPINK9Q5DT21 86 aa11.7□□□□□ -0.54
CDH3-205ENST00000566808 SLC35G3Q8N808 338 aa11.7□□□□□ -0.54
CDH3-205ENST00000566808 DUSP21Q9H596 190 aa11.7□□□□□ -0.54
CDH3-205ENST00000566808 TRDV1A0A1B0GX56 115 aa11.69□□□□□ -0.54
CDH3-205ENST00000566808 RNASE2P10153 161 aaKnown RBP11.69□□□□□ -0.54
CDH3-205ENST00000566808 CBX5P45973 191 aa11.69□□□□□ -0.54
CDH3-205ENST00000566808 DEFB1P60022 68 aa11.69□□□□□ -0.54
CDH3-205ENST00000566808 DLK1P80370 383 aa11.69□□□□□ -0.54
CDH3-205ENST00000566808 ZNF79Q15937 498 aa11.69□□□□□ -0.54
CDH3-205ENST00000566808 SPATA31B1PQ5VZV4 182 aa11.69□□□□□ -0.54
CDH3-205ENST00000566808 OR4B1Q8NGF8 309 aa11.69□□□□□ -0.54
CDH3-205ENST00000566808 RNF141Q8WVD5 230 aa11.69□□□□□ -0.54
CDH3-205ENST00000566808 ZNF2Q9BSG1 426 aaPredicted RBP11.69□□□□□ -0.54
CDH3-205ENST00000566808 FXYD6Q9H0Q3 95 aa11.69□□□□□ -0.54
CDH3-205ENST00000566808 TRAV18A0A075B6X5 111 aa11.68□□□□□ -0.54
CDH3-205ENST00000566808 A0A0A6YYH2 397 aa11.68□□□□□ -0.54
CDH3-205ENST00000566808 A6NJ64 397 aa11.68□□□□□ -0.54
CDH3-205ENST00000566808 ATP5G1P05496 136 aa11.68□□□□□ -0.54
CDH3-205ENST00000566808 RPL5P46777 297 aaKnown RBP11.68□□□□□ -0.54
CDH3-205ENST00000566808 ATP5G3P48201 142 aa11.68□□□□□ -0.54
CDH3-205ENST00000566808 RORCP51449 518 aa11.68□□□□□ -0.54
CDH3-205ENST00000566808 PSG9Q00887 426 aa11.68□□□□□ -0.54
CDH3-205ENST00000566808 C22orf42Q6IC83 251 aa11.68□□□□□ -0.54
CDH3-205ENST00000566808 DHRS11Q6UWP2 260 aa11.68□□□□□ -0.54
CDH3-205ENST00000566808 OR1S2Q8NGQ3 325 aa11.68□□□□□ -0.54
CDH3-205ENST00000566808 MRGPRFQ96AM1 343 aa11.68□□□□□ -0.54
CDH3-205ENST00000566808 TMEM208Q9BTX3 173 aa11.68□□□□□ -0.54
CDH3-205ENST00000566808 MAGT1Q9H0U3 335 aa11.68□□□□□ -0.54
CDH3-205ENST00000566808 HMCN2Q8NDA2 5059 aa11.67□□□□□ -0.54
CDH3-205ENST00000566808 BUB3O43684 328 aa11.67□□□□□ -0.54
CDH3-205ENST00000566808 IGKV1-39P01597 117 aa11.67□□□□□ -0.54
CDH3-205ENST00000566808 IGKV1D-39P04432 117 aa11.67□□□□□ -0.54
CDH3-205ENST00000566808 IGLC1P0CG04 106 aa11.67□□□□□ -0.54
CDH3-205ENST00000566808 DEFB130BP0DP73 79 aa11.67□□□□□ -0.54
CDH3-205ENST00000566808 DEFB130AP0DP74 79 aa11.67□□□□□ -0.54
CDH3-205ENST00000566808 S100GP29377 79 aa11.67□□□□□ -0.54
CDH3-205ENST00000566808 PSMB3P49720 205 aa11.67□□□□□ -0.54
CDH3-205ENST00000566808 Q6ZSN1 163 aa11.67□□□□□ -0.54
CDH3-205ENST00000566808 PRSS48Q7RTY5 328 aa11.67□□□□□ -0.54
CDH3-205ENST00000566808 OR4C16Q8NGL9 310 aa11.67□□□□□ -0.54
CDH3-205ENST00000566808 OR6F1Q8NGZ6 308 aa11.67□□□□□ -0.54
CDH3-205ENST00000566808 Q8WTZ3 238 aa11.67□□□□□ -0.54
CDH3-205ENST00000566808 SLC25A38Q96DW6 304 aa11.67□□□□□ -0.54
CDH3-205ENST00000566808 C17orf77Q96MU5 243 aa11.67□□□□□ -0.54
CDH3-205ENST00000566808 UPK3BQ9BT76 320 aa11.67□□□□□ -0.54
CDH3-205ENST00000566808 EREGO14944 169 aa11.66□□□□□ -0.54
CDH3-205ENST00000566808 IL4P05112 153 aa11.66□□□□□ -0.54
CDH3-205ENST00000566808 PAX9P55771 341 aa11.66□□□□□ -0.54
CDH3-205ENST00000566808 YPEL3P61236 119 aaPredicted RBP11.66□□□□□ -0.54
CDH3-205ENST00000566808 TBCEQ15813 527 aaPredicted RBP11.66□□□□□ -0.54
CDH3-205ENST00000566808 PHLDA2Q53GA4 152 aa11.66□□□□□ -0.54
CDH3-205ENST00000566808 COQ8AQ8NI60 647 aa11.66□□□□□ -0.54
CDH3-205ENST00000566808 LINC00052Q96N35 136 aa11.66□□□□□ -0.54
CDH3-205ENST00000566808 AUNIPQ9H7T9 357 aa11.66□□□□□ -0.54
CDH3-205ENST00000566808 IFT46Q9NQC8 304 aa11.66□□□□□ -0.54
CDH3-205ENST00000566808 MDFICQ9P1T7 246 aa11.66□□□□□ -0.54
CDH3-205ENST00000566808 FAM229AH3BQW9 127 aa11.65□□□□□ -0.54
CDH3-205ENST00000566808 M0QYG6 137 aa11.65□□□□□ -0.54
CDH3-205ENST00000566808 NUP62P37198 522 aaPredicted RBP11.65□□□□□ -0.54
CDH3-205ENST00000566808 ID1P41134 155 aa11.65□□□□□ -0.54
CDH3-205ENST00000566808 RFX2P48378 723 aa11.65□□□□□ -0.54
CDH3-205ENST00000566808 SCAND1P57086 179 aa11.65□□□□□ -0.54
CDH3-205ENST00000566808 DHODHQ02127 395 aa11.65□□□□□ -0.54
CDH3-205ENST00000566808 SFXN4Q6P4A7 337 aa11.65□□□□□ -0.54
CDH3-205ENST00000566808 IGF2BP2-AS1Q96M15 143 aa11.65□□□□□ -0.54
CDH3-205ENST00000566808 TSPOP30536 169 aa11.64□□□□□ -0.55
CDH3-205ENST00000566808 OR10J1P30954 320 aa11.64□□□□□ -0.55
CDH3-205ENST00000566808 LINC00315P59091 139 aa11.64□□□□□ -0.55
CDH3-205ENST00000566808 ICAM4Q14773 271 aa11.64□□□□□ -0.55
CDH3-205ENST00000566808 MLANAQ16655 118 aa11.64□□□□□ -0.55
CDH3-205ENST00000566808 FAM78BQ5VT40 261 aa11.64□□□□□ -0.55
CDH3-205ENST00000566808 EBLN2Q6P2I7 272 aa11.64□□□□□ -0.55
CDH3-205ENST00000566808 Q6ZRN7 208 aaPredicted RBP11.64□□□□□ -0.55
CDH3-205ENST00000566808 TBC1D26Q86UD7 250 aa11.64□□□□□ -0.55
CDH3-205ENST00000566808 PDCD10Q9BUL8 212 aa11.64□□□□□ -0.55
CDH3-205ENST00000566808 WDR12Q9GZL7 423 aaKnown RBP11.64□□□□□ -0.55
CDH3-205ENST00000566808 VCXQ9H320 206 aa11.64□□□□□ -0.55
CDH3-205ENST00000566808 MEIS3P1A6NDR6 274 aa11.63□□□□□ -0.55
CDH3-205ENST00000566808 RND2P52198 227 aa11.63□□□□□ -0.55
CDH3-205ENST00000566808 TAS2R46P59540 309 aa11.63□□□□□ -0.55
CDH3-205ENST00000566808 ERVFC1-1P60608 527 aa11.63□□□□□ -0.55
CDH3-205ENST00000566808 IZUMO4Q1ZYL8 232 aa11.63□□□□□ -0.55
CDH3-205ENST00000566808 BSXQ3C1V8 233 aa11.63□□□□□ -0.55
CDH3-205ENST00000566808 OR5H2Q8NGV7 314 aa11.63□□□□□ -0.55
CDH3-205ENST00000566808 ABHD1Q96SE0 405 aa11.63□□□□□ -0.55
CDH3-205ENST00000566808 ENY2Q9NPA8 101 aa11.63□□□□□ -0.55
CDH3-205ENST00000566808 ZNF586Q9NXT0 402 aa11.63□□□□□ -0.55
CDH3-205ENST00000566808 RRP15Q9Y3B9 282 aaKnown RBP11.63□□□□□ -0.55
CDH3-205ENST00000566808 A0A0J9YX75 114 aa11.62□□□□□ -0.55
CDH3-205ENST00000566808 CBY3A6NI87 242 aa11.62□□□□□ -0.55
CDH3-205ENST00000566808 SOCS3O14543 225 aa11.62□□□□□ -0.55
CDH3-205ENST00000566808 IFNA5P01569 189 aa11.62□□□□□ -0.55
CDH3-205ENST00000566808 SMR3BP02814 79 aaPredicted RBP11.62□□□□□ -0.55
CDH3-205ENST00000566808 PSMB9P28065 219 aa11.62□□□□□ -0.55
CDH3-205ENST00000566808 FUSP35637 526 aaKnown RBP eCLIP11.62□□□□□ -0.55
CDH3-205ENST00000566808 HSPA13P48723 471 aa11.62□□□□□ -0.55
CDH3-205ENST00000566808 KRTAP10-1P60331 282 aa11.62□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms