RNA–Protein interactions for RNA: ENST00000566523.1

CCP110-208, Transcript of centriolar coiled-coil protein 110, humanhuman

TSL 3

Gene CCP110, Length 818 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCP110-208ENST00000566523 ITFG2Q969R8 447 aa0.59□□□□□ -2.31
CCP110-208ENST00000566523 U3KQ87 197 aa0.59□□□□□ -2.31
CCP110-208ENST00000566523 COL1A1P02452 1464 aaPredicted RBP0.59□□□□□ -2.32
CCP110-208ENST00000566523 EML5Q05BV3 1969 aa0.58□□□□□ -2.32
CCP110-208ENST00000566523 TRAV3A0A0B4J244 114 aa0.58□□□□□ -2.32
CCP110-208ENST00000566523 C7orf71A4D174 169 aa0.58□□□□□ -2.32
CCP110-208ENST00000566523 CCDC160A6NGH7 325 aa0.58□□□□□ -2.32
CCP110-208ENST00000566523 OR4E1P0C645 316 aa0.58□□□□□ -2.32
CCP110-208ENST00000566523 DEFA1P59665 94 aa0.58□□□□□ -2.32
CCP110-208ENST00000566523 TEX47Q8TBZ9 253 aa0.58□□□□□ -2.32
CCP110-208ENST00000566523 OR51V1Q9H2C8 321 aa0.58□□□□□ -2.32
CCP110-208ENST00000566523 ECM29Q5VYK3 1845 aa0.58□□□□□ -2.32
CCP110-208ENST00000566523 E9PCH4 1651 aa0.58□□□□□ -2.32
CCP110-208ENST00000566523 MED1Q15648 1581 aaPredicted RBP0.57□□□□□ -2.32
CCP110-208ENST00000566523 A0A1W2PPM0 123 aa0.57□□□□□ -2.32
CCP110-208ENST00000566523 CLDN24A6NM45 220 aa0.57□□□□□ -2.32
CCP110-208ENST00000566523 KRT222Q8N1A0 295 aa0.57□□□□□ -2.32
CCP110-208ENST00000566523 CLDN22Q8N7P3 220 aa0.57□□□□□ -2.32
CCP110-208ENST00000566523 C8orf76Q96K31 380 aa0.57□□□□□ -2.32
CCP110-208ENST00000566523 CYSLTR1Q9Y271 337 aa0.57□□□□□ -2.32
CCP110-208ENST00000566523 V9GYY5 206 aaPredicted RBP0.57□□□□□ -2.32
CCP110-208ENST00000566523 NCR3O14931 201 aa0.56□□□□□ -2.32
CCP110-208ENST00000566523 TSNQ15631 228 aaKnown RBP0.56□□□□□ -2.32
CCP110-208ENST00000566523 ESRGQ1W209 222 aa0.56□□□□□ -2.32
CCP110-208ENST00000566523 BRMS1LQ5PSV4 323 aa0.56□□□□□ -2.32
CCP110-208ENST00000566523 SPATA8Q6RVD6 105 aa0.56□□□□□ -2.32
CCP110-208ENST00000566523 C12orf45Q8N5I9 185 aaPredicted RBP0.56□□□□□ -2.32
CCP110-208ENST00000566523 LINC00301Q8NCQ3 95 aa0.56□□□□□ -2.32
CCP110-208ENST00000566523 CCDC90BQ9GZT6 254 aa0.56□□□□□ -2.32
CCP110-208ENST00000566523 DENND4CQ5VZ89 1909 aa0.56□□□□□ -2.32
CCP110-208ENST00000566523 A0A087X0T9 212 aa0.55□□□□□ -2.32
CCP110-208ENST00000566523 FAM236DA0A1B0GTK5 79 aa0.55□□□□□ -2.32
CCP110-208ENST00000566523 SMIM23A6NLE4 172 aa0.55□□□□□ -2.32
CCP110-208ENST00000566523 FAM236CP0DP71 79 aa0.55□□□□□ -2.32
CCP110-208ENST00000566523 OR6V1Q8N148 313 aa0.55□□□□□ -2.32
CCP110-208ENST00000566523 C2orf50Q96LR7 162 aa0.55□□□□□ -2.32
CCP110-208ENST00000566523 C14orf132Q9NPU4 83 aa0.55□□□□□ -2.32
CCP110-208ENST00000566523 MYO3BQ8WXR4 1341 aa0.55□□□□□ -2.32
CCP110-208ENST00000566523 PHGR1C9JFL3 82 aa0.54□□□□□ -2.32
CCP110-208ENST00000566523 CASP1P29466 404 aa0.54□□□□□ -2.32
CCP110-208ENST00000566523 SRSF6Q13247 344 aaKnown RBP0.54□□□□□ -2.32
CCP110-208ENST00000566523 LCA10Q71F78 164 aa0.54□□□□□ -2.32
CCP110-208ENST00000566523 PATE1Q8WXA2 126 aa0.54□□□□□ -2.32
CCP110-208ENST00000566523 BORCS7Q96B45 105 aa0.54□□□□□ -2.32
CCP110-208ENST00000566523 HIST1H2BLQ99880 126 aa0.54□□□□□ -2.32
CCP110-208ENST00000566523 CMSS1Q9BQ75 279 aaKnown RBP0.54□□□□□ -2.32
CCP110-208ENST00000566523 RNF122Q9H9V4 155 aa0.54□□□□□ -2.32
CCP110-208ENST00000566523 NOSIPQ9Y314 301 aaKnown RBP0.54□□□□□ -2.32
CCP110-208ENST00000566523 CCL25O15444 150 aa0.53□□□□□ -2.32
CCP110-208ENST00000566523 CNIH1O95406 144 aa0.53□□□□□ -2.32
CCP110-208ENST00000566523 PSG9Q00887 426 aa0.53□□□□□ -2.32
CCP110-208ENST00000566523 IAH1Q2TAA2 248 aaPredicted RBP0.53□□□□□ -2.32
CCP110-208ENST00000566523 C12orf74Q32Q52 190 aa0.53□□□□□ -2.32
CCP110-208ENST00000566523 CLECL1Q8IZS7 167 aa0.53□□□□□ -2.32
CCP110-208ENST00000566523 GDPD1Q8N9F7 314 aa0.53□□□□□ -2.32
CCP110-208ENST00000566523 CT55Q8WUE5 264 aa0.53□□□□□ -2.32
CCP110-208ENST00000566523 ADAT3Q96EY9 351 aaPredicted RBP0.53□□□□□ -2.32
CCP110-208ENST00000566523 TAF1LQ8IZX4 1826 aa0.52□□□□□ -2.33
CCP110-208ENST00000566523 ZNF106Q9H2Y7 1883 aaKnown RBP0.52□□□□□ -2.33
CCP110-208ENST00000566523 ZNF682O95780 498 aa0.52□□□□□ -2.33
CCP110-208ENST00000566523 ANP32AP39687 249 aaKnown RBP0.52□□□□□ -2.33
CCP110-208ENST00000566523 OMPP47874 163 aa0.52□□□□□ -2.33
CCP110-208ENST00000566523 EFNA4P52798 201 aa0.52□□□□□ -2.33
CCP110-208ENST00000566523 SPRNQ5BIV9 151 aa0.52□□□□□ -2.33
CCP110-208ENST00000566523 FAM74A1Q5RGS3 127 aa0.52□□□□□ -2.33
CCP110-208ENST00000566523 OR8D4Q8NGM9 314 aa0.52□□□□□ -2.33
CCP110-208ENST00000566523 WFDC5Q8TCV5 224 aa0.52□□□□□ -2.33
CCP110-208ENST00000566523 KPNA3O00505 521 aaPredicted RBP0.51□□□□□ -2.33
CCP110-208ENST00000566523 AP3S2P59780 193 aa0.51□□□□□ -2.33
CCP110-208ENST00000566523 OR2T10Q8NGZ9 312 aa0.51□□□□□ -2.33
CCP110-208ENST00000566523 C6orf62Q9GZU0 229 aaPredicted RBP0.51□□□□□ -2.33
CCP110-208ENST00000566523 C10orf95Q9H7T3 257 aa0.51□□□□□ -2.33
CCP110-208ENST00000566523 UBAP1Q9NZ09 502 aa0.51□□□□□ -2.33
CCP110-208ENST00000566523 TRBV6-4A0A1B0GX49 114 aa0.5□□□□□ -2.33
CCP110-208ENST00000566523 hADV38S2A0JD32 116 aa0.5□□□□□ -2.33
CCP110-208ENST00000566523 CCL16O15467 120 aa0.5□□□□□ -2.33
CCP110-208ENST00000566523 DNAL4O96015 105 aa0.5□□□□□ -2.33
CCP110-208ENST00000566523 PPIBP23284 216 aaKnown RBP0.5□□□□□ -2.33
CCP110-208ENST00000566523 LINC00322Q6ZN03 302 aaPredicted RBP0.5□□□□□ -2.33
CCP110-208ENST00000566523 PARD6GQ9BYG4 376 aaPredicted RBP0.5□□□□□ -2.33
CCP110-208ENST00000566523 BCL2L10Q9HD36 194 aa0.5□□□□□ -2.33
CCP110-208ENST00000566523 UTP11Q9Y3A2 253 aaKnown RBP0.5□□□□□ -2.33
CCP110-208ENST00000566523 NCOA1Q15788 1441 aa0.49□□□□□ -2.33
CCP110-208ENST00000566523 SCN3AQ9NY46 2000 aa0.49□□□□□ -2.33
CCP110-208ENST00000566523 J3QRK9 145 aa0.49□□□□□ -2.33
CCP110-208ENST00000566523 DHFRP00374 187 aa0.49□□□□□ -2.33
CCP110-208ENST00000566523 PTRHD1Q6GMV3 140 aaKnown RBP0.49□□□□□ -2.33
CCP110-208ENST00000566523 GKN2Q86XP6 184 aa0.49□□□□□ -2.33
CCP110-208ENST00000566523 CCDC42Q96M95 316 aa0.49□□□□□ -2.33
CCP110-208ENST00000566523 CHCHD2Q9Y6H1 151 aaPredicted RBP0.49□□□□□ -2.33
CCP110-208ENST00000566523 MDN1Q9NU22 5596 aa0.48□□□□□ -2.33
CCP110-208ENST00000566523 hCG_1818297A0A087WSY0 165 aa0.48□□□□□ -2.33
CCP110-208ENST00000566523 A0A087WUJ7 227 aa0.48□□□□□ -2.33
CCP110-208ENST00000566523 A8MT66 165 aa0.48□□□□□ -2.33
CCP110-208ENST00000566523 TRAPPC5Q8IUR0 188 aa0.48□□□□□ -2.33
CCP110-208ENST00000566523 TMEM133Q9H2Q1 129 aa0.48□□□□□ -2.33
CCP110-208ENST00000566523 MUC5BQ9HC84 5762 aaPredicted RBP0.48□□□□□ -2.33
CCP110-208ENST00000566523 PIK3C2GO75747 1445 aa0.47□□□□□ -2.33
CCP110-208ENST00000566523 TNS3Q68CZ2 1445 aa0.47□□□□□ -2.33
CCP110-208ENST00000566523 DOCK3Q8IZD9 2030 aa0.47□□□□□ -2.33
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms