RNA–Protein interactions for RNA: ENST00000564641.1

CHD9-212, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 4

Gene CHD9, Length 589 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-212ENST00000564641 TRAPPC1Q9Y5R8 145 aa2.72□□□□□ -1.97
CHD9-212ENST00000564641 F8P00451 2351 aa2.72□□□□□ -1.97
CHD9-212ENST00000564641 NAV3Q8IVL0 2385 aa2.72□□□□□ -1.97
CHD9-212ENST00000564641 NUP210LQ5VU65 1888 aa2.71□□□□□ -1.98
CHD9-212ENST00000564641 ABCA4P78363 2273 aa2.71□□□□□ -1.98
CHD9-212ENST00000564641 GTF3C1Q12789 2109 aa2.71□□□□□ -1.98
CHD9-212ENST00000564641 TNRC6AQ8NDV7 1962 aaKnown RBP2.71□□□□□ -1.98
CHD9-212ENST00000564641 CACNA1CQ13936 2221 aa2.71□□□□□ -1.98
CHD9-212ENST00000564641 IGLV3-16A0A075B6K0 115 aa2.71□□□□□ -1.98
CHD9-212ENST00000564641 IGLC7A0M8Q6 106 aa2.71□□□□□ -1.98
CHD9-212ENST00000564641 TMEM212A6NML5 194 aa2.71□□□□□ -1.98
CHD9-212ENST00000564641 G3V3Y1 287 aa2.71□□□□□ -1.98
CHD9-212ENST00000564641 CDC42EP2O14613 210 aa2.71□□□□□ -1.98
CHD9-212ENST00000564641 HCRTR1O43613 425 aa2.71□□□□□ -1.98
CHD9-212ENST00000564641 GNG7O60262 68 aa2.71□□□□□ -1.98
CHD9-212ENST00000564641 NPIPB7O75200 414 aa2.71□□□□□ -1.98
CHD9-212ENST00000564641 KLF7O75840 302 aaPredicted RBP2.71□□□□□ -1.98
CHD9-212ENST00000564641 EPPINO95925 133 aa2.71□□□□□ -1.98
CHD9-212ENST00000564641 CATP04040 527 aaKnown RBP2.71□□□□□ -1.98
CHD9-212ENST00000564641 IGLC2P0DOY2 106 aa2.71□□□□□ -1.98
CHD9-212ENST00000564641 IGLC3P0DOY3 106 aa2.71□□□□□ -1.98
CHD9-212ENST00000564641 ESDP10768 282 aa2.71□□□□□ -1.98
CHD9-212ENST00000564641 ZNF43P17038 809 aa2.71□□□□□ -1.98
CHD9-212ENST00000564641 COX5AP20674 150 aa2.71□□□□□ -1.98
CHD9-212ENST00000564641 IGHV1-2P23083 117 aa2.71□□□□□ -1.98
CHD9-212ENST00000564641 S100GP29377 79 aa2.71□□□□□ -1.98
CHD9-212ENST00000564641 HRH1P35367 487 aa2.71□□□□□ -1.98
CHD9-212ENST00000564641 UQCRFS1P47985 274 aa2.71□□□□□ -1.98
CHD9-212ENST00000564641 DNASE1L1P49184 302 aa2.71□□□□□ -1.98
CHD9-212ENST00000564641 RAB9AP51151 201 aa2.71□□□□□ -1.98
CHD9-212ENST00000564641 BIDP55957 195 aa2.71□□□□□ -1.98
CHD9-212ENST00000564641 RAB38P57729 211 aa2.71□□□□□ -1.98
CHD9-212ENST00000564641 LCN6P62502 163 aa2.71□□□□□ -1.98
CHD9-212ENST00000564641 FAM53BQ14153 422 aa2.71□□□□□ -1.98
CHD9-212ENST00000564641 GGTLC2Q14390 218 aa2.71□□□□□ -1.98
CHD9-212ENST00000564641 OR1Q1Q15612 314 aa2.71□□□□□ -1.98
CHD9-212ENST00000564641 ADIRFQ15847 76 aa2.71□□□□□ -1.98
CHD9-212ENST00000564641 CLEC12BQ2HXU8 276 aa2.71□□□□□ -1.98
CHD9-212ENST00000564641 PLPPR5Q32ZL2 321 aa2.71□□□□□ -1.98
CHD9-212ENST00000564641 TRMT12Q53H54 448 aaKnown RBP2.71□□□□□ -1.98
CHD9-212ENST00000564641 C9orf135Q5VTT2 229 aa2.71□□□□□ -1.98
CHD9-212ENST00000564641 AMMECR1LQ6DCA0 310 aa2.71□□□□□ -1.98
CHD9-212ENST00000564641 UFSP1Q6NVU6 142 aa2.71□□□□□ -1.98
CHD9-212ENST00000564641 OLIG3Q7RTU3 272 aa2.71□□□□□ -1.98
CHD9-212ENST00000564641 ZNF550Q7Z398 422 aa2.71□□□□□ -1.98
CHD9-212ENST00000564641 C1orf174Q8IYL3 243 aa2.71□□□□□ -1.98
CHD9-212ENST00000564641 SIGLECL1Q8N7X8 197 aa2.71□□□□□ -1.98
CHD9-212ENST00000564641 FER1L6-AS1Q8NA97 138 aa2.71□□□□□ -1.98
CHD9-212ENST00000564641 OR1L4Q8NGR5 311 aa2.71□□□□□ -1.98
CHD9-212ENST00000564641 OR11L1Q8NGX0 322 aa2.71□□□□□ -1.98
CHD9-212ENST00000564641 OR4K13Q8NH42 304 aa2.71□□□□□ -1.98
CHD9-212ENST00000564641 CLDND2Q8NHS1 167 aa2.71□□□□□ -1.98
CHD9-212ENST00000564641 KCNG3Q8TAE7 436 aa2.71□□□□□ -1.98
CHD9-212ENST00000564641 STARD4Q96DR4 205 aa2.71□□□□□ -1.98
CHD9-212ENST00000564641 GNPNAT1Q96EK6 184 aaPredicted RBP2.71□□□□□ -1.98
CHD9-212ENST00000564641 Q96M85 177 aa2.71□□□□□ -1.98
CHD9-212ENST00000564641 P2RX4Q99571 388 aa2.71□□□□□ -1.98
CHD9-212ENST00000564641 KIR2DL4Q99706 377 aa2.71□□□□□ -1.98
CHD9-212ENST00000564641 HSPB9Q9BQS6 159 aa2.71□□□□□ -1.98
CHD9-212ENST00000564641 HES7Q9BYE0 225 aa2.71□□□□□ -1.98
CHD9-212ENST00000564641 SAMD10Q9BYL1 202 aa2.71□□□□□ -1.98
CHD9-212ENST00000564641 LPAR5Q9H1C0 372 aa2.71□□□□□ -1.98
CHD9-212ENST00000564641 OR51I2Q9H344 312 aa2.71□□□□□ -1.98
CHD9-212ENST00000564641 CKLFQ9UBR5 152 aa2.71□□□□□ -1.98
CHD9-212ENST00000564641 SMPXQ9UHP9 88 aa2.71□□□□□ -1.98
CHD9-212ENST00000564641 AK3Q9UIJ7 227 aa2.71□□□□□ -1.98
CHD9-212ENST00000564641 IER3IP1Q9Y5U9 82 aa2.71□□□□□ -1.98
CHD9-212ENST00000564641 LRBAP50851 2863 aa2.71□□□□□ -1.98
CHD9-212ENST00000564641 SPENQ96T58 3664 aaKnown RBP2.71□□□□□ -1.98
CHD9-212ENST00000564641 ABCA2Q9BZC7 2435 aa2.71□□□□□ -1.98
CHD9-212ENST00000564641 MED13LQ71F56 2210 aa2.7□□□□□ -1.98
CHD9-212ENST00000564641 UTP20O75691 2785 aaKnown RBP2.7□□□□□ -1.98
CHD9-212ENST00000564641 SCN2AQ99250 2005 aa2.7□□□□□ -1.98
CHD9-212ENST00000564641 CCDC88CQ9P219 2028 aa2.7□□□□□ -1.98
CHD9-212ENST00000564641 TRAV8-7A0A075B6U6 113 aa2.7□□□□□ -1.98
CHD9-212ENST00000564641 IGHV2-26A0A0B4J1V2 119 aa2.7□□□□□ -1.98
CHD9-212ENST00000564641 IGHV1-69-2A0A0G2JMI3 117 aa2.7□□□□□ -1.98
CHD9-212ENST00000564641 A0A1B0GWB2 263 aa2.7□□□□□ -1.98
CHD9-212ENST00000564641 OR6C6A6NF89 314 aa2.7□□□□□ -1.98
CHD9-212ENST00000564641 CEBPZOSA8MTT3 80 aa2.7□□□□□ -1.98
CHD9-212ENST00000564641 E9PLD3 99 aa2.7□□□□□ -1.98
CHD9-212ENST00000564641 KLRC4-KLRK1H3BQV0 150 aa2.7□□□□□ -1.98
CHD9-212ENST00000564641 CCL21O00585 134 aa2.7□□□□□ -1.98
CHD9-212ENST00000564641 RBFOX2O43251 390 aaKnown RBP eCLIP2.7□□□□□ -1.98
CHD9-212ENST00000564641 YPEL1O60688 119 aa2.7□□□□□ -1.98
CHD9-212ENST00000564641 HYPMO75409 117 aa2.7□□□□□ -1.98
CHD9-212ENST00000564641 NDUFB2O95178 105 aa2.7□□□□□ -1.98
CHD9-212ENST00000564641 HRASP01112 189 aa2.7□□□□□ -1.98
CHD9-212ENST00000564641 HLA-HP01893 362 aa2.7□□□□□ -1.98
CHD9-212ENST00000564641 TYMSP04818 313 aa2.7□□□□□ -1.98
CHD9-212ENST00000564641 ATP6V0CP27449 155 aa2.7□□□□□ -1.98
CHD9-212ENST00000564641 PSMB5P28074 263 aa2.7□□□□□ -1.98
CHD9-212ENST00000564641 CD1BP29016 333 aa2.7□□□□□ -1.98
CHD9-212ENST00000564641 GABRA3P34903 492 aa2.7□□□□□ -1.98
CHD9-212ENST00000564641 GUCA1AP43080 201 aaPredicted RBP2.7□□□□□ -1.98
CHD9-212ENST00000564641 CA7P43166 264 aa2.7□□□□□ -1.98
CHD9-212ENST00000564641 DAP3P51398 398 aaKnown RBP2.7□□□□□ -1.98
CHD9-212ENST00000564641 NCBP2P52298 156 aaKnown RBP eCLIP2.7□□□□□ -1.98
CHD9-212ENST00000564641 CRYBA4P53673 196 aa2.7□□□□□ -1.98
CHD9-212ENST00000564641 EMP2P54851 167 aa2.7□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms