RNA–Protein interactions for RNA: ENST00000563963.1

TUBGCP4-207, Transcript of tubulin gamma complex associated protein 4, humanhuman

TSL 2

Gene TUBGCP4, Length 4,379 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBGCP4-207ENST00000563963 ASPHD1Q5U4P2 390 aa4.86□□□□□ -1.63
TUBGCP4-207ENST00000563963 LRRC29Q8WV35 223 aa4.86□□□□□ -1.63
TUBGCP4-207ENST00000563963 SPRY4Q9C004 299 aa4.86□□□□□ -1.63
TUBGCP4-207ENST00000563963 KMT2BQ9UMN6 2715 aaPredicted RBP4.85□□□□□ -1.63
TUBGCP4-207ENST00000563963 TRAV4A0A0B4J268 109 aa4.85□□□□□ -1.63
TUBGCP4-207ENST00000563963 J3QLW9 94 aa4.85□□□□□ -1.63
TUBGCP4-207ENST00000563963 OR5AL1P0C617 328 aa4.85□□□□□ -1.63
TUBGCP4-207ENST00000563963 FBXW4P57775 412 aa4.85□□□□□ -1.63
TUBGCP4-207ENST00000563963 INSL4Q14641 139 aa4.85□□□□□ -1.63
TUBGCP4-207ENST00000563963 OR2T6Q8NHC8 308 aa4.85□□□□□ -1.63
TUBGCP4-207ENST00000563963 BADQ92934 168 aa4.85□□□□□ -1.63
TUBGCP4-207ENST00000563963 VKORC1Q9BQB6 163 aa4.85□□□□□ -1.63
TUBGCP4-207ENST00000563963 CHCHD5Q9BSY4 110 aa4.85□□□□□ -1.63
TUBGCP4-207ENST00000563963 TRAV8-4A0A0B4J246 113 aa4.85□□□□□ -1.63
TUBGCP4-207ENST00000563963 M0R1B8 84 aa4.85□□□□□ -1.63
TUBGCP4-207ENST00000563963 EFNA2O43921 213 aa4.85□□□□□ -1.63
TUBGCP4-207ENST00000563963 CLDN2P57739 230 aa4.85□□□□□ -1.63
TUBGCP4-207ENST00000563963 WFDC11Q8NEX6 87 aa4.85□□□□□ -1.63
TUBGCP4-207ENST00000563963 ZNF665Q9H7R5 613 aa4.85□□□□□ -1.63
TUBGCP4-207ENST00000563963 M0QZQ0 153 aa4.85□□□□□ -1.63
TUBGCP4-207ENST00000563963 M0R2P5 195 aa4.85□□□□□ -1.63
TUBGCP4-207ENST00000563963 HLA-DQA1P01909 254 aa4.85□□□□□ -1.63
TUBGCP4-207ENST00000563963 MGST1P10620 155 aaKnown RBP4.85□□□□□ -1.63
TUBGCP4-207ENST00000563963 FSTP19883 344 aa4.85□□□□□ -1.63
TUBGCP4-207ENST00000563963 FKBP2P26885 142 aaKnown RBP4.85□□□□□ -1.63
TUBGCP4-207ENST00000563963 HOXD3P31249 432 aaPredicted RBP4.85□□□□□ -1.63
TUBGCP4-207ENST00000563963 CCL20P78556 96 aa4.85□□□□□ -1.63
TUBGCP4-207ENST00000563963 ARFRP1Q13795 201 aa4.85□□□□□ -1.63
TUBGCP4-207ENST00000563963 Q5XG85 94 aa4.85□□□□□ -1.63
TUBGCP4-207ENST00000563963 OR2A1Q8NGT9 310 aa4.85□□□□□ -1.63
TUBGCP4-207ENST00000563963 CARD19Q96LW7 228 aa4.85□□□□□ -1.63
TUBGCP4-207ENST00000563963 CKLFQ9UBR5 152 aa4.85□□□□□ -1.63
TUBGCP4-207ENST00000563963 C19orf25Q9UFG5 118 aaPredicted RBP4.85□□□□□ -1.63
TUBGCP4-207ENST00000563963 KLF13Q9Y2Y9 288 aaPredicted RBP4.85□□□□□ -1.63
TUBGCP4-207ENST00000563963 NPC2P61916 151 aa4.84□□□□□ -1.63
TUBGCP4-207ENST00000563963 UBE2L3P68036 154 aaKnown RBP4.84□□□□□ -1.63
TUBGCP4-207ENST00000563963 TMEM187Q14656 261 aa4.84□□□□□ -1.63
TUBGCP4-207ENST00000563963 SLC25A48Q6ZT89 311 aaKnown RBP4.84□□□□□ -1.63
TUBGCP4-207ENST00000563963 IMUPQ9GZP8 106 aa4.84□□□□□ -1.63
TUBGCP4-207ENST00000563963 GBF1Q92538 1859 aa4.84□□□□□ -1.63
TUBGCP4-207ENST00000563963 SPRY2O43597 315 aa4.84□□□□□ -1.63
TUBGCP4-207ENST00000563963 COX7CP15954 63 aa4.84□□□□□ -1.63
TUBGCP4-207ENST00000563963 LIM2P55344 173 aa4.84□□□□□ -1.63
TUBGCP4-207ENST00000563963 HILS1P60008 231 aa4.84□□□□□ -1.63
TUBGCP4-207ENST00000563963 ZNF816Q0VGE8 651 aaPredicted RBP4.84□□□□□ -1.63
TUBGCP4-207ENST00000563963 FOXC1Q12948 553 aa4.84□□□□□ -1.63
TUBGCP4-207ENST00000563963 DNM1P46Q6ZS02 220 aa4.84□□□□□ -1.63
TUBGCP4-207ENST00000563963 Q6ZVL8 140 aa4.84□□□□□ -1.63
TUBGCP4-207ENST00000563963 FAM57BQ71RH2 274 aa4.84□□□□□ -1.63
TUBGCP4-207ENST00000563963 RPS4Y2Q8TD47 263 aa4.84□□□□□ -1.63
TUBGCP4-207ENST00000563963 APOBEC4Q8WW27 367 aaKnown RBP4.84□□□□□ -1.63
TUBGCP4-207ENST00000563963 GNB1LQ9BYB4 327 aa4.84□□□□□ -1.63
TUBGCP4-207ENST00000563963 NUP214P35658 2090 aaPredicted RBP4.84□□□□□ -1.63
TUBGCP4-207ENST00000563963 SNRNP200O75643 2136 aaKnown RBP4.84□□□□□ -1.63
TUBGCP4-207ENST00000563963 CEP350Q5VT06 3117 aa4.84□□□□□ -1.63
TUBGCP4-207ENST00000563963 TRBV5-4A0A0C4DH59 114 aa4.84□□□□□ -1.63
TUBGCP4-207ENST00000563963 hDV102S1A0JD36 115 aa4.84□□□□□ -1.63
TUBGCP4-207ENST00000563963 E9PLD3 99 aa4.84□□□□□ -1.63
TUBGCP4-207ENST00000563963 C11orf98E9PRG8 122 aa4.84□□□□□ -1.63
TUBGCP4-207ENST00000563963 CLDN14O95500 239 aa4.84□□□□□ -1.63
TUBGCP4-207ENST00000563963 CRYGAP11844 174 aa4.84□□□□□ -1.63
TUBGCP4-207ENST00000563963 ERVK-16P61578 105 aa4.84□□□□□ -1.63
TUBGCP4-207ENST00000563963 PNPLA5Q7Z6Z6 429 aaPredicted RBP4.84□□□□□ -1.63
TUBGCP4-207ENST00000563963 CEND1Q8N111 149 aa4.84□□□□□ -1.63
TUBGCP4-207ENST00000563963 C2orf48Q96LS8 159 aa4.84□□□□□ -1.63
TUBGCP4-207ENST00000563963 PDCD11Q14690 1871 aaKnown RBP4.84□□□□□ -1.64
TUBGCP4-207ENST00000563963 MAP1BP46821 2468 aaKnown RBP4.84□□□□□ -1.64
TUBGCP4-207ENST00000563963 RBAKDNA6NC62 111 aa4.83□□□□□ -1.64
TUBGCP4-207ENST00000563963 K7ENP7 123 aa4.83□□□□□ -1.64
TUBGCP4-207ENST00000563963 LOXP28300 417 aaPredicted RBP4.83□□□□□ -1.64
TUBGCP4-207ENST00000563963 TRIP6Q15654 476 aaKnown RBP4.83□□□□□ -1.64
TUBGCP4-207ENST00000563963 LCN10Q6JVE6 187 aa4.83□□□□□ -1.64
TUBGCP4-207ENST00000563963 SHISA9B4DS77 424 aa4.83□□□□□ -1.64
TUBGCP4-207ENST00000563963 VCYO14598 125 aa4.83□□□□□ -1.64
TUBGCP4-207ENST00000563963 NDUFB2O95178 105 aa4.83□□□□□ -1.64
TUBGCP4-207ENST00000563963 POU3F1Q03052 451 aaPredicted RBP4.83□□□□□ -1.64
TUBGCP4-207ENST00000563963 PHLDA2Q53GA4 152 aa4.83□□□□□ -1.64
TUBGCP4-207ENST00000563963 CIARTQ8N365 385 aaPredicted RBP4.83□□□□□ -1.64
TUBGCP4-207ENST00000563963 FAM19A2Q8N3H0 131 aa4.83□□□□□ -1.64
TUBGCP4-207ENST00000563963 RFLNBQ8N5W9 214 aa4.83□□□□□ -1.64
TUBGCP4-207ENST00000563963 DCAF4L2Q8NA75 395 aa4.83□□□□□ -1.64
TUBGCP4-207ENST00000563963 AGPAT4-IT1Q9H0P7 198 aa4.83□□□□□ -1.64
TUBGCP4-207ENST00000563963 SAP30LQ9HAJ7 183 aa4.83□□□□□ -1.64
TUBGCP4-207ENST00000563963 AP5S1Q9NUS5 200 aa4.83□□□□□ -1.64
TUBGCP4-207ENST00000563963 NUMA1Q14980 2115 aa4.83□□□□□ -1.64
TUBGCP4-207ENST00000563963 NYNRINQ9P2P1 1898 aaKnown RBP4.83□□□□□ -1.64
TUBGCP4-207ENST00000563963 TRAV12-2A0A075B6T6 113 aa4.83□□□□□ -1.64
TUBGCP4-207ENST00000563963 SMIM26A0A096LP01 95 aa4.83□□□□□ -1.64
TUBGCP4-207ENST00000563963 CD7P09564 240 aa4.83□□□□□ -1.64
TUBGCP4-207ENST00000563963 COX6A1P12074 109 aa4.83□□□□□ -1.64
TUBGCP4-207ENST00000563963 NUP35Q8NFH5 326 aa4.83□□□□□ -1.64
TUBGCP4-207ENST00000563963 TSKUQ8WUA8 353 aa4.83□□□□□ -1.64
TUBGCP4-207ENST00000563963 PLA2G2EQ9NZK7 142 aa4.83□□□□□ -1.64
TUBGCP4-207ENST00000563963 GREB1Q4ZG55 1949 aa4.83□□□□□ -1.64
TUBGCP4-207ENST00000563963 CPSF4LA6NMK7 179 aaKnown RBP4.83□□□□□ -1.64
TUBGCP4-207ENST00000563963 LYRM9A8MSI8 78 aa4.83□□□□□ -1.64
TUBGCP4-207ENST00000563963 LEPROTL1O95214 131 aa4.83□□□□□ -1.64
TUBGCP4-207ENST00000563963 ZNF136P52737 540 aa4.83□□□□□ -1.64
TUBGCP4-207ENST00000563963 HERVK_113P61574 105 aa4.83□□□□□ -1.64
TUBGCP4-207ENST00000563963 ZNF627Q7L945 461 aa4.83□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms