RNA–Protein interactions for RNA: ENST00000560920.6

TRIP4-211, Transcript of thyroid hormone receptor interactor 4, humanhuman

TSL 3

Gene TRIP4, Length 565 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIP4-211ENST00000560920 HOXA1P49639 335 aaPredicted RBP13.24□□□□□ -0.29
TRIP4-211ENST00000560920 SNRPD3P62318 126 aaKnown RBP13.24□□□□□ -0.29
TRIP4-211ENST00000560920 CROCCP3Q8IVE0 287 aa13.24□□□□□ -0.29
TRIP4-211ENST00000560920 YTHDF1Q9BYJ9 559 aaKnown RBP13.24□□□□□ -0.29
TRIP4-211ENST00000560920 DKK2Q9UBU2 259 aa13.24□□□□□ -0.29
TRIP4-211ENST00000560920 TMEM189A5PLL7 270 aa13.23□□□□□ -0.29
TRIP4-211ENST00000560920 SCGB2A1O75556 95 aa13.23□□□□□ -0.29
TRIP4-211ENST00000560920 HLA-DRB4P13762 266 aa13.23□□□□□ -0.29
TRIP4-211ENST00000560920 PI3P19957 117 aa13.23□□□□□ -0.29
TRIP4-211ENST00000560920 AKR1C2P52895 323 aa13.23□□□□□ -0.29
TRIP4-211ENST00000560920 RND3P61587 244 aa13.23□□□□□ -0.29
TRIP4-211ENST00000560920 DHODHQ02127 395 aa13.23□□□□□ -0.29
TRIP4-211ENST00000560920 USF2Q15853 346 aaPredicted RBP13.23□□□□□ -0.29
TRIP4-211ENST00000560920 GDF5OSQ5U4N7 250 aa13.23□□□□□ -0.29
TRIP4-211ENST00000560920 Q8WTZ3 238 aa13.23□□□□□ -0.29
TRIP4-211ENST00000560920 PDCD10Q9BUL8 212 aa13.23□□□□□ -0.29
TRIP4-211ENST00000560920 NRN1Q9NPD7 142 aa13.23□□□□□ -0.29
TRIP4-211ENST00000560920 HLA-DRB4X5D2U9 266 aa13.23□□□□□ -0.29
TRIP4-211ENST00000560920 A0A0G2JRQ6 117 aa13.22□□□□□ -0.29
TRIP4-211ENST00000560920 FXYD7P58549 80 aa13.22□□□□□ -0.29
TRIP4-211ENST00000560920 DEFB1P60022 68 aa13.22□□□□□ -0.29
TRIP4-211ENST00000560920 YPEL3P61236 119 aaPredicted RBP13.22□□□□□ -0.29
TRIP4-211ENST00000560920 FAM222AQ5U5X8 452 aa13.22□□□□□ -0.29
TRIP4-211ENST00000560920 PRSS54Q6PEW0 395 aa13.22□□□□□ -0.29
TRIP4-211ENST00000560920 OR1S2Q8NGQ3 325 aa13.22□□□□□ -0.29
TRIP4-211ENST00000560920 NIPSNAP3BQ9BS92 247 aa13.22□□□□□ -0.29
TRIP4-211ENST00000560920 ENY2Q9NPA8 101 aa13.22□□□□□ -0.29
TRIP4-211ENST00000560920 RFNGQ9Y644 331 aa13.22□□□□□ -0.29
TRIP4-211ENST00000560920 IGHV3OR16-12A0A075B7B8 117 aa13.21□□□□□ -0.29
TRIP4-211ENST00000560920 BUB3O43684 328 aa13.21□□□□□ -0.29
TRIP4-211ENST00000560920 CDK2AP2O75956 126 aa13.21□□□□□ -0.29
TRIP4-211ENST00000560920 RND2P52198 227 aa13.21□□□□□ -0.29
TRIP4-211ENST00000560920 PIGPP57054 158 aa13.21□□□□□ -0.29
TRIP4-211ENST00000560920 TNP2Q05952 138 aa13.21□□□□□ -0.29
TRIP4-211ENST00000560920 RPS10-NUDT3A0A1W2PQS6 291 aa13.2□□□□□ -0.3
TRIP4-211ENST00000560920 C16orf90A8MZG2 172 aa13.2□□□□□ -0.3
TRIP4-211ENST00000560920 M0QYG6 137 aa13.2□□□□□ -0.3
TRIP4-211ENST00000560920 IGKV3-20P01619 116 aa13.2□□□□□ -0.3
TRIP4-211ENST00000560920 PGAM2P15259 253 aa13.2□□□□□ -0.3
TRIP4-211ENST00000560920 OR10J1P30954 320 aa13.2□□□□□ -0.3
TRIP4-211ENST00000560920 NKX2-1P43699 371 aaPredicted RBP13.2□□□□□ -0.3
TRIP4-211ENST00000560920 NEDD8Q15843 81 aa13.2□□□□□ -0.3
TRIP4-211ENST00000560920 SP6Q3SY56 376 aa13.2□□□□□ -0.3
TRIP4-211ENST00000560920 SIGLEC15Q6ZMC9 328 aa13.2□□□□□ -0.3
TRIP4-211ENST00000560920 ZNF486Q96H40 463 aaPredicted RBP13.2□□□□□ -0.3
TRIP4-211ENST00000560920 SCPEP1Q9HB40 452 aa13.2□□□□□ -0.3
TRIP4-211ENST00000560920 C3orf85A0A1B0GTC6 90 aa13.19□□□□□ -0.3
TRIP4-211ENST00000560920 ATG12O94817 140 aa13.19□□□□□ -0.3
TRIP4-211ENST00000560920 IL4P05112 153 aa13.19□□□□□ -0.3
TRIP4-211ENST00000560920 HTN3P15516 51 aa13.19□□□□□ -0.3
TRIP4-211ENST00000560920 RCVRNP35243 200 aa13.19□□□□□ -0.3
TRIP4-211ENST00000560920 OXA1LQ15070 435 aa13.19□□□□□ -0.3
TRIP4-211ENST00000560920 TMEM88Q6PEY1 159 aa13.19□□□□□ -0.3
TRIP4-211ENST00000560920 LHFPL1Q86WI0 220 aa13.19□□□□□ -0.3
TRIP4-211ENST00000560920 SNX29P2Q8IUI4 249 aa13.19□□□□□ -0.3
TRIP4-211ENST00000560920 MAPKAPK5-AS1Q8N8E1 139 aa13.19□□□□□ -0.3
TRIP4-211ENST00000560920 TEX48A0A1B0GUV7 120 aa13.18□□□□□ -0.3
TRIP4-211ENST00000560920 NXPH3O95157 252 aa13.18□□□□□ -0.3
TRIP4-211ENST00000560920 SLC25A4P12235 298 aa13.18□□□□□ -0.3
TRIP4-211ENST00000560920 HTR2BP41595 481 aa13.18□□□□□ -0.3
TRIP4-211ENST00000560920 SPCS3P61009 180 aa13.18□□□□□ -0.3
TRIP4-211ENST00000560920 AARDQ4LEZ3 155 aa13.18□□□□□ -0.3
TRIP4-211ENST00000560920 ZNF709Q8N972 641 aa13.18□□□□□ -0.3
TRIP4-211ENST00000560920 TMEM170AQ8WVE7 144 aa13.18□□□□□ -0.3
TRIP4-211ENST00000560920 TRIM16LQ309B1 348 aa13.17□□□□□ -0.3
TRIP4-211ENST00000560920 C2orf83Q53S99 150 aa13.17□□□□□ -0.3
TRIP4-211ENST00000560920 C1orf158Q8N1D5 194 aa13.17□□□□□ -0.3
TRIP4-211ENST00000560920 RNASEH2CQ8TDP1 164 aaKnown RBP13.17□□□□□ -0.3
TRIP4-211ENST00000560920 RRNAD1Q96FB5 475 aaKnown RBP13.17□□□□□ -0.3
TRIP4-211ENST00000560920 CLUHP3Q96NS8 147 aa13.17□□□□□ -0.3
TRIP4-211ENST00000560920 WDR12Q9GZL7 423 aaKnown RBP13.17□□□□□ -0.3
TRIP4-211ENST00000560920 SAV1Q9H4B6 383 aaPredicted RBP13.17□□□□□ -0.3
TRIP4-211ENST00000560920 APOBP04114 4563 aaKnown RBP13.17□□□□□ -0.3
TRIP4-211ENST00000560920 TOMM40O96008 361 aa13.16□□□□□ -0.3
TRIP4-211ENST00000560920 RD3LP0DJH9 198 aa13.16□□□□□ -0.3
TRIP4-211ENST00000560920 UCP1P25874 307 aa13.16□□□□□ -0.3
TRIP4-211ENST00000560920 LSM3P62310 102 aaKnown RBP13.16□□□□□ -0.3
TRIP4-211ENST00000560920 OR52E5Q8NH55 327 aa13.16□□□□□ -0.3
TRIP4-211ENST00000560920 NPIPB3Q92617 1050 aa13.16□□□□□ -0.3
TRIP4-211ENST00000560920 SLC35B3Q9H1N7 401 aa13.16□□□□□ -0.3
TRIP4-211ENST00000560920 HEYLQ9NQ87 328 aaPredicted RBP13.16□□□□□ -0.3
TRIP4-211ENST00000560920 YTHDF2Q9Y5A9 579 aaKnown RBP13.16□□□□□ -0.3
TRIP4-211ENST00000560920 SMIM31A0A1B0GVY4 71 aa13.15□□□□□ -0.3
TRIP4-211ENST00000560920 GSTZ1O43708 216 aaPredicted RBP13.15□□□□□ -0.3
TRIP4-211ENST00000560920 APOA1P02647 267 aa13.15□□□□□ -0.3
TRIP4-211ENST00000560920 FAM3BP58499 235 aaPredicted RBP13.15□□□□□ -0.3
TRIP4-211ENST00000560920 FOXI2Q6ZQN5 318 aa13.15□□□□□ -0.3
TRIP4-211ENST00000560920 LINC00052Q96N35 136 aa13.15□□□□□ -0.3
TRIP4-211ENST00000560920 CTNNBIP1Q9NSA3 81 aaPredicted RBP13.15□□□□□ -0.3
TRIP4-211ENST00000560920 COMMD3Q9UBI1 195 aa13.15□□□□□ -0.3
TRIP4-211ENST00000560920 LOC102723971A0A1B0GUV8 181 aa13.14□□□□□ -0.31
TRIP4-211ENST00000560920 PSG1P11464 419 aa13.14□□□□□ -0.31
TRIP4-211ENST00000560920 ZNF79Q15937 498 aa13.14□□□□□ -0.31
TRIP4-211ENST00000560920 GSG1LQ6UXU4 331 aa13.14□□□□□ -0.31
TRIP4-211ENST00000560920 OR4B1Q8NGF8 309 aa13.14□□□□□ -0.31
TRIP4-211ENST00000560920 OR51G1Q8NGK1 321 aa13.14□□□□□ -0.31
TRIP4-211ENST00000560920 RNASE11Q8TAA1 199 aaKnown RBP13.14□□□□□ -0.31
TRIP4-211ENST00000560920 COPZ2Q9P299 210 aa13.14□□□□□ -0.31
TRIP4-211ENST00000560920 KLK11Q9UBX7 282 aa13.14□□□□□ -0.31
TRIP4-211ENST00000560920 TMED3Q9Y3Q3 217 aa13.14□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms