RNA–Protein interactions for RNA: ENST00000559886.1

HERC1-205, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 1 (best)

Gene HERC1, Length 2,462 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-205ENST00000559886 TRGV9Q99603 122 aa9.48□□□□□ -0.89
HERC1-205ENST00000559886 C16orf95Q9H693 158 aa9.48□□□□□ -0.89
HERC1-205ENST00000559886 TCRBV4S1A1TA0A5B7 111 aa9.47□□□□□ -0.89
HERC1-205ENST00000559886 TEX38Q6PEX7 206 aa9.47□□□□□ -0.89
HERC1-205ENST00000559886 TMEM182Q6ZP80 229 aaPredicted RBP9.47□□□□□ -0.89
HERC1-205ENST00000559886 KCNIP2Q9NS61 270 aa9.47□□□□□ -0.89
HERC1-205ENST00000559886 TRBV7-1A0A0A6YYK4 115 aa9.47□□□□□ -0.89
HERC1-205ENST00000559886 UMAD1C9J7I0 102 aa9.47□□□□□ -0.89
HERC1-205ENST00000559886 IGHV3-23P01764 117 aa9.47□□□□□ -0.89
HERC1-205ENST00000559886 PRR20EP86478 221 aa9.47□□□□□ -0.89
HERC1-205ENST00000559886 PRR20CP86479 221 aa9.47□□□□□ -0.89
HERC1-205ENST00000559886 PRR20DP86480 221 aa9.47□□□□□ -0.89
HERC1-205ENST00000559886 PRR20BP86481 221 aa9.47□□□□□ -0.89
HERC1-205ENST00000559886 PRR20AP86496 221 aa9.47□□□□□ -0.89
HERC1-205ENST00000559886 ZNF90Q03938 601 aa9.47□□□□□ -0.89
HERC1-205ENST00000559886 FOXE3Q13461 319 aa9.47□□□□□ -0.89
HERC1-205ENST00000559886 MIC13Q5XKP0 118 aa9.47□□□□□ -0.89
HERC1-205ENST00000559886 CYP2G1PQ6ZSU1 146 aa9.47□□□□□ -0.89
HERC1-205ENST00000559886 RNF141Q8WVD5 230 aa9.47□□□□□ -0.89
HERC1-205ENST00000559886 EEF1AKMT3Q96AZ1 226 aa9.47□□□□□ -0.89
HERC1-205ENST00000559886 PXMP4Q9Y6I8 212 aa9.47□□□□□ -0.89
HERC1-205ENST00000559886 TRAV30A0A087WSZ9 112 aa9.46□□□□□ -0.89
HERC1-205ENST00000559886 GNG7O60262 68 aa9.46□□□□□ -0.89
HERC1-205ENST00000559886 NDUFA7O95182 113 aa9.46□□□□□ -0.89
HERC1-205ENST00000559886 IGKV1-17P01599 117 aa9.46□□□□□ -0.89
HERC1-205ENST00000559886 ELANEP08246 267 aa9.46□□□□□ -0.89
HERC1-205ENST00000559886 LINC00869P0C866 280 aa9.46□□□□□ -0.89
HERC1-205ENST00000559886 RAB5CP51148 216 aa9.46□□□□□ -0.89
HERC1-205ENST00000559886 SELENOTP62341 195 aa9.46□□□□□ -0.89
HERC1-205ENST00000559886 Q56UQ5 140 aa9.46□□□□□ -0.89
HERC1-205ENST00000559886 FFAR4Q5NUL3 377 aa9.46□□□□□ -0.89
HERC1-205ENST00000559886 LCNL1Q6ZST4 164 aa9.46□□□□□ -0.89
HERC1-205ENST00000559886 STPG3Q8N7X2 389 aa9.46□□□□□ -0.89
HERC1-205ENST00000559886 RNF152Q8N8N0 203 aa9.46□□□□□ -0.89
HERC1-205ENST00000559886 CCDC140Q96MF4 163 aa9.46□□□□□ -0.89
HERC1-205ENST00000559886 ATP6V0BQ99437 205 aa9.46□□□□□ -0.89
HERC1-205ENST00000559886 TEP1Q99973 2627 aaKnown RBP9.46□□□□□ -0.89
HERC1-205ENST00000559886 NIPBLQ6KC79 2804 aaeCLIP9.46□□□□□ -0.89
HERC1-205ENST00000559886 A0A0G2JLM5 398 aa9.46□□□□□ -0.9
HERC1-205ENST00000559886 TSPAN15O95858 294 aa9.46□□□□□ -0.9
HERC1-205ENST00000559886 B2MP61769 119 aa9.46□□□□□ -0.9
HERC1-205ENST00000559886 AKR1C8PQ5T2L2 129 aa9.46□□□□□ -0.9
HERC1-205ENST00000559886 BPIFCQ8NFQ6 507 aa9.46□□□□□ -0.9
HERC1-205ENST00000559886 SLC39A9Q9NUM3 307 aa9.46□□□□□ -0.9
HERC1-205ENST00000559886 GAR1Q9NY12 217 aaKnown RBP9.46□□□□□ -0.9
HERC1-205ENST00000559886 YIF1AO95070 293 aa9.45□□□□□ -0.9
HERC1-205ENST00000559886 GATA2P23769 480 aaPredicted RBP9.45□□□□□ -0.9
HERC1-205ENST00000559886 ELLP55199 621 aaPredicted RBP9.45□□□□□ -0.9
HERC1-205ENST00000559886 KIAA0141Q14154 515 aaPredicted RBP9.45□□□□□ -0.9
HERC1-205ENST00000559886 TIGITQ495A1 244 aa9.45□□□□□ -0.9
HERC1-205ENST00000559886 COMMD1Q8N668 190 aa9.45□□□□□ -0.9
HERC1-205ENST00000559886 KLHDC1Q8N7A1 406 aa9.45□□□□□ -0.9
HERC1-205ENST00000559886 LINC01006Q8NI28 216 aa9.45□□□□□ -0.9
HERC1-205ENST00000559886 LRRC20Q8TCA0 184 aa9.45□□□□□ -0.9
HERC1-205ENST00000559886 VSIRQ9H7M9 311 aa9.45□□□□□ -0.9
HERC1-205ENST00000559886 OR2T8A6NH00 312 aa9.45□□□□□ -0.9
HERC1-205ENST00000559886 MBP02144 154 aa9.45□□□□□ -0.9
HERC1-205ENST00000559886 CTSGP08311 255 aa9.45□□□□□ -0.9
HERC1-205ENST00000559886 MYOZ3Q8TDC0 251 aa9.45□□□□□ -0.9
HERC1-205ENST00000559886 WIPF2Q8TF74 440 aaPredicted RBP9.45□□□□□ -0.9
HERC1-205ENST00000559886 RPRMQ9NS64 109 aa9.45□□□□□ -0.9
HERC1-205ENST00000559886 C2CD3Q4AC94 2353 aa9.44□□□□□ -0.9
HERC1-205ENST00000559886 CLEC3BP05452 202 aa9.44□□□□□ -0.9
HERC1-205ENST00000559886 NMBP08949 121 aa9.44□□□□□ -0.9
HERC1-205ENST00000559886 GPR183P32249 361 aa9.44□□□□□ -0.9
HERC1-205ENST00000559886 FHITP49789 147 aa9.44□□□□□ -0.9
HERC1-205ENST00000559886 YPEL3P61236 119 aaPredicted RBP9.44□□□□□ -0.9
HERC1-205ENST00000559886 TMEM41BQ5BJD5 291 aa9.44□□□□□ -0.9
HERC1-205ENST00000559886 CLEC19AQ6UXS0 136 aa9.44□□□□□ -0.9
HERC1-205ENST00000559886 ZNF705EA8MWA4 302 aaPredicted RBP9.44□□□□□ -0.9
HERC1-205ENST00000559886 SCGB2A1O75556 95 aa9.44□□□□□ -0.9
HERC1-205ENST00000559886 RPLP1P05386 114 aaKnown RBP9.44□□□□□ -0.9
HERC1-205ENST00000559886 FABP1P07148 127 aa9.44□□□□□ -0.9
HERC1-205ENST00000559886 M6PRP20645 277 aa9.44□□□□□ -0.9
HERC1-205ENST00000559886 ADMP35318 185 aa9.44□□□□□ -0.9
HERC1-205ENST00000559886 RAB2AP61019 212 aa9.44□□□□□ -0.9
HERC1-205ENST00000559886 RAB14P61106 215 aa9.44□□□□□ -0.9
HERC1-205ENST00000559886 ZNF616Q08AN1 781 aa9.44□□□□□ -0.9
HERC1-205ENST00000559886 ACOT6Q3I5F7 207 aaPredicted RBP9.44□□□□□ -0.9
HERC1-205ENST00000559886 ZNF343Q6P1L6 599 aa9.44□□□□□ -0.9
HERC1-205ENST00000559886 DPPA3Q6W0C5 159 aa9.44□□□□□ -0.9
HERC1-205ENST00000559886 PCNPQ8WW12 178 aaKnown RBP9.44□□□□□ -0.9
HERC1-205ENST00000559886 SAT2Q96F10 170 aaPredicted RBP9.44□□□□□ -0.9
HERC1-205ENST00000559886 CHRDL1Q9BU40 450 aa9.44□□□□□ -0.9
HERC1-205ENST00000559886 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP9.43□□□□□ -0.9
HERC1-205ENST00000559886 NUPL2O15504 423 aaKnown RBP9.43□□□□□ -0.9
HERC1-205ENST00000559886 PSG1P11464 419 aa9.43□□□□□ -0.9
HERC1-205ENST00000559886 GCSAMLQ5JQS6 135 aa9.43□□□□□ -0.9
HERC1-205ENST00000559886 CLLU1Q5K131 121 aa9.43□□□□□ -0.9
HERC1-205ENST00000559886 Q6ZRG5 221 aa9.43□□□□□ -0.9
HERC1-205ENST00000559886 RPP25LQ8N5L8 163 aaKnown RBP9.43□□□□□ -0.9
HERC1-205ENST00000559886 ZNF491Q8N8L2 437 aa9.43□□□□□ -0.9
HERC1-205ENST00000559886 OR5AU1Q8NGC0 362 aa9.43□□□□□ -0.9
HERC1-205ENST00000559886 TOMM40O96008 361 aa9.43□□□□□ -0.9
HERC1-205ENST00000559886 RD3LP0DJH9 198 aa9.43□□□□□ -0.9
HERC1-205ENST00000559886 SRSF2Q01130 221 aaKnown RBP9.43□□□□□ -0.9
HERC1-205ENST00000559886 SPSB3Q6PJ21 355 aa9.43□□□□□ -0.9
HERC1-205ENST00000559886 OR10G4Q8NGN3 311 aa9.43□□□□□ -0.9
HERC1-205ENST00000559886 OR10G9Q8NGN4 311 aa9.43□□□□□ -0.9
HERC1-205ENST00000559886 OR10G7Q8NGN6 311 aa9.43□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 774.4 ms