RNA–Protein interactions for RNA: ENST00000559276.5

USP3-212, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 4

Gene USP3, Length 554 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-212ENST00000559276 LINC01559Q495D7 138 aa4.69□□□□□ -1.66
USP3-212ENST00000559276 ZNF585BQ52M93 769 aa4.69□□□□□ -1.66
USP3-212ENST00000559276 LRRC10Q5BKY1 277 aa4.69□□□□□ -1.66
USP3-212ENST00000559276 SPANXN5Q5MJ07 72 aa4.69□□□□□ -1.66
USP3-212ENST00000559276 FFAR4Q5NUL3 377 aa4.69□□□□□ -1.66
USP3-212ENST00000559276 TRAT1Q6PIZ9 186 aa4.69□□□□□ -1.66
USP3-212ENST00000559276 TEX43Q6ZNM6 134 aa4.69□□□□□ -1.66
USP3-212ENST00000559276 LINC01551Q86U37 167 aa4.69□□□□□ -1.66
USP3-212ENST00000559276 CD177Q8N6Q3 437 aa4.69□□□□□ -1.66
USP3-212ENST00000559276 OR4B1Q8NGF8 309 aa4.69□□□□□ -1.66
USP3-212ENST00000559276 H1FXQ92522 213 aaKnown RBP4.69□□□□□ -1.66
USP3-212ENST00000559276 C11orf52Q96A22 123 aa4.69□□□□□ -1.66
USP3-212ENST00000559276 RPUSD4Q96CM3 377 aaKnown RBP4.69□□□□□ -1.66
USP3-212ENST00000559276 SDSLQ96GA7 329 aa4.69□□□□□ -1.66
USP3-212ENST00000559276 MS4A10Q96PG2 267 aa4.69□□□□□ -1.66
USP3-212ENST00000559276 RBM14Q96PK6 669 aaKnown RBP4.69□□□□□ -1.66
USP3-212ENST00000559276 OR4F4Q96R69 305 aa4.69□□□□□ -1.66
USP3-212ENST00000559276 MIEN1Q9BRT3 115 aa4.69□□□□□ -1.66
USP3-212ENST00000559276 RTL8AQ9BWD3 113 aa4.69□□□□□ -1.66
USP3-212ENST00000559276 SNHG12Q9BXW3 62 aa4.69□□□□□ -1.66
USP3-212ENST00000559276 ZNF702PQ9H963 129 aa4.69□□□□□ -1.66
USP3-212ENST00000559276 SERTAD4Q9NUC0 356 aa4.69□□□□□ -1.66
USP3-212ENST00000559276 MTCH1Q9NZJ7 389 aa4.69□□□□□ -1.66
USP3-212ENST00000559276 TRAPPC1Q9Y5R8 145 aa4.69□□□□□ -1.66
USP3-212ENST00000559276 RFNGQ9Y644 331 aa4.69□□□□□ -1.66
USP3-212ENST00000559276 NBEAL2Q6ZNJ1 2754 aa4.69□□□□□ -1.66
USP3-212ENST00000559276 DSCAML1Q8TD84 2053 aa4.68□□□□□ -1.66
USP3-212ENST00000559276 MARCH11A6NNE9 402 aa4.68□□□□□ -1.66
USP3-212ENST00000559276 C9JCJ5 164 aa4.68□□□□□ -1.66
USP3-212ENST00000559276 FNDC10F2Z333 226 aa4.68□□□□□ -1.66
USP3-212ENST00000559276 DLEU1O43261 78 aa4.68□□□□□ -1.66
USP3-212ENST00000559276 SCGB1D1O95968 90 aa4.68□□□□□ -1.66
USP3-212ENST00000559276 MT-CO2P00403 227 aa4.68□□□□□ -1.66
USP3-212ENST00000559276 IGLV2-14P01704 120 aa4.68□□□□□ -1.66
USP3-212ENST00000559276 REG1AP05451 166 aa4.68□□□□□ -1.66
USP3-212ENST00000559276 OR10J4P0C629 311 aa4.68□□□□□ -1.66
USP3-212ENST00000559276 IAPPP10997 89 aa4.68□□□□□ -1.66
USP3-212ENST00000559276 GZMHP20718 246 aa4.68□□□□□ -1.66
USP3-212ENST00000559276 OPRK1P41145 380 aa4.68□□□□□ -1.66
USP3-212ENST00000559276 OR3A1P47881 315 aa4.68□□□□□ -1.66
USP3-212ENST00000559276 ELLP55199 621 aaPredicted RBP4.68□□□□□ -1.66
USP3-212ENST00000559276 DLX6P56179 175 aa4.68□□□□□ -1.66
USP3-212ENST00000559276 Q0VG73 95 aa4.68□□□□□ -1.66
USP3-212ENST00000559276 ZNF146Q15072 292 aa4.68□□□□□ -1.66
USP3-212ENST00000559276 Q6P435 159 aa4.68□□□□□ -1.66
USP3-212ENST00000559276 ACSM6Q6P461 480 aa4.68□□□□□ -1.66
USP3-212ENST00000559276 WDR73Q6P4I2 378 aa4.68□□□□□ -1.66
USP3-212ENST00000559276 Q6ZRM9 215 aa4.68□□□□□ -1.66
USP3-212ENST00000559276 Q6ZS46 218 aa4.68□□□□□ -1.66
USP3-212ENST00000559276 SSX7Q7RTT5 188 aa4.68□□□□□ -1.66
USP3-212ENST00000559276 LHFPL4Q7Z7J7 247 aa4.68□□□□□ -1.66
USP3-212ENST00000559276 LYG1Q8N1E2 194 aa4.68□□□□□ -1.66
USP3-212ENST00000559276 Q8N2B8 174 aa4.68□□□□□ -1.66
USP3-212ENST00000559276 DRAM1Q8N682 238 aa4.68□□□□□ -1.66
USP3-212ENST00000559276 KLHDC1Q8N7A1 406 aa4.68□□□□□ -1.66
USP3-212ENST00000559276 OR52E5Q8NH55 327 aa4.68□□□□□ -1.66
USP3-212ENST00000559276 CMTM2Q8TAZ6 248 aa4.68□□□□□ -1.66
USP3-212ENST00000559276 TMEM37Q8WXS4 190 aa4.68□□□□□ -1.66
USP3-212ENST00000559276 SFRP2Q96HF1 295 aa4.68□□□□□ -1.66
USP3-212ENST00000559276 ZNF488Q96MN9 340 aa4.68□□□□□ -1.66
USP3-212ENST00000559276 HSD17B10Q99714 261 aaKnown RBP4.68□□□□□ -1.66
USP3-212ENST00000559276 NPCDR1Q9BY65 106 aa4.68□□□□□ -1.66
USP3-212ENST00000559276 VSIRQ9H7M9 311 aa4.68□□□□□ -1.66
USP3-212ENST00000559276 WDR83OSQ9Y284 106 aa4.68□□□□□ -1.66
USP3-212ENST00000559276 RBM7Q9Y580 266 aaKnown RBP4.68□□□□□ -1.66
USP3-212ENST00000559276 DNAH9Q9NYC9 4486 aa4.68□□□□□ -1.66
USP3-212ENST00000559276 SAA2-SAA4A0A096LPE2 208 aa4.67□□□□□ -1.66
USP3-212ENST00000559276 A0A1W2PPV4 95 aa4.67□□□□□ -1.66
USP3-212ENST00000559276 TMEM30CPA0ZSE6 113 aa4.67□□□□□ -1.66
USP3-212ENST00000559276 C20orf202A1L168 122 aa4.67□□□□□ -1.66
USP3-212ENST00000559276 ZNF320A2RRD8 509 aa4.67□□□□□ -1.66
USP3-212ENST00000559276 NKX6-3A6NJ46 265 aa4.67□□□□□ -1.66
USP3-212ENST00000559276 PMS2P5A8MQ11 134 aa4.67□□□□□ -1.66
USP3-212ENST00000559276 SLC33A1O00400 549 aaPredicted RBP4.67□□□□□ -1.66
USP3-212ENST00000559276 SH2D1BO14796 132 aa4.67□□□□□ -1.66
USP3-212ENST00000559276 RBFOX2O43251 390 aaKnown RBP eCLIP4.67□□□□□ -1.66
USP3-212ENST00000559276 TNFSF12O43508 249 aa4.67□□□□□ -1.66
USP3-212ENST00000559276 SYNGR1O43759 233 aa4.67□□□□□ -1.66
USP3-212ENST00000559276 YPEL1O60688 119 aa4.67□□□□□ -1.66
USP3-212ENST00000559276 PAGE4O60829 102 aa4.67□□□□□ -1.66
USP3-212ENST00000559276 CXorf1O96002 111 aa4.67□□□□□ -1.66
USP3-212ENST00000559276 HPRT1P00492 218 aa4.67□□□□□ -1.66
USP3-212ENST00000559276 IGKV1D-33P01593 117 aa4.67□□□□□ -1.66
USP3-212ENST00000559276 IGKV1-33P01594 117 aa4.67□□□□□ -1.66
USP3-212ENST00000559276 SNRPCP09234 159 aaKnown RBP4.67□□□□□ -1.66
USP3-212ENST00000559276 CD28P10747 220 aa4.67□□□□□ -1.66
USP3-212ENST00000559276 AREGP15514 252 aa4.67□□□□□ -1.66
USP3-212ENST00000559276 CCL3L1P16619 93 aa4.67□□□□□ -1.66
USP3-212ENST00000559276 GABRA2P47869 451 aa4.67□□□□□ -1.66
USP3-212ENST00000559276 CEBPDP49716 269 aaPredicted RBP4.67□□□□□ -1.66
USP3-212ENST00000559276 ATP5IP56385 69 aaPredicted RBP4.67□□□□□ -1.66
USP3-212ENST00000559276 ERVK11-1P61568 191 aa4.67□□□□□ -1.66
USP3-212ENST00000559276 EIF4EBP1Q13541 118 aaPredicted RBP4.67□□□□□ -1.66
USP3-212ENST00000559276 RTL8BQ17RB0 113 aa4.67□□□□□ -1.66
USP3-212ENST00000559276 OR10J3Q5JRS4 329 aa4.67□□□□□ -1.66
USP3-212ENST00000559276 COL5A1-AS1Q5SY13 56 aa4.67□□□□□ -1.66
USP3-212ENST00000559276 TMEM200BQ69YZ2 307 aa4.67□□□□□ -1.66
USP3-212ENST00000559276 TEX38Q6PEX7 206 aa4.67□□□□□ -1.66
USP3-212ENST00000559276 RASL11AQ6T310 242 aa4.67□□□□□ -1.66
USP3-212ENST00000559276 ACP7Q6ZNF0 438 aa4.67□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms