RNA–Protein interactions for RNA: ENST00000557538.5

HIF1A-212, Transcript of hypoxia inducible factor 1 subunit alpha, humanhuman

TSL 1 (best) BASIC

Gene HIF1A, Length 3,468 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF1A-212ENST00000557538 ACY3Q96HD9 319 aa1.14□□□□□ -2.23
HIF1A-212ENST00000557538 ERMAPQ96PL5 475 aaPredicted RBP1.14□□□□□ -2.23
HIF1A-212ENST00000557538 ANAPC13Q9BS18 74 aa1.14□□□□□ -2.23
HIF1A-212ENST00000557538 UPK3BQ9BT76 320 aa1.14□□□□□ -2.23
HIF1A-212ENST00000557538 SNRNP25Q9BV90 132 aaKnown RBP1.14□□□□□ -2.23
HIF1A-212ENST00000557538 PBOV1Q9GZY1 135 aa1.14□□□□□ -2.23
HIF1A-212ENST00000557538 ENY2Q9NPA8 101 aa1.14□□□□□ -2.23
HIF1A-212ENST00000557538 DNAJC15Q9Y5T4 150 aa1.14□□□□□ -2.23
HIF1A-212ENST00000557538 PTPRDP23468 1912 aa1.14□□□□□ -2.23
HIF1A-212ENST00000557538 NHSL1Q5SYE7 1610 aa1.14□□□□□ -2.23
HIF1A-212ENST00000557538 THSD7AQ9UPZ6 1657 aa1.14□□□□□ -2.23
HIF1A-212ENST00000557538 DOCK3Q8IZD9 2030 aa1.14□□□□□ -2.23
HIF1A-212ENST00000557538 PLXNA1Q9UIW2 1896 aa1.14□□□□□ -2.23
HIF1A-212ENST00000557538 TRBV24-1A0A075B6N3 115 aa1.13□□□□□ -2.23
HIF1A-212ENST00000557538 PNMA8CA0A1B0GUJ8 204 aa1.13□□□□□ -2.23
HIF1A-212ENST00000557538 C7orf77A4D0Y5 90 aa1.13□□□□□ -2.23
HIF1A-212ENST00000557538 EEF1E1-BLOC1S5C9J1V9 151 aa1.13□□□□□ -2.23
HIF1A-212ENST00000557538 EEF1E1O43324 174 aaKnown RBP1.13□□□□□ -2.23
HIF1A-212ENST00000557538 SFT2D2O95562 160 aa1.13□□□□□ -2.23
HIF1A-212ENST00000557538 KRASP01116 189 aa1.13□□□□□ -2.23
HIF1A-212ENST00000557538 ATP5G1P05496 136 aa1.13□□□□□ -2.23
HIF1A-212ENST00000557538 OR5AL1P0C617 328 aa1.13□□□□□ -2.23
HIF1A-212ENST00000557538 OR12D1P0DN82 309 aa1.13□□□□□ -2.23
HIF1A-212ENST00000557538 SLC25A6P12236 298 aa1.13□□□□□ -2.23
HIF1A-212ENST00000557538 FKBP2P26885 142 aaKnown RBP1.13□□□□□ -2.23
HIF1A-212ENST00000557538 CRYBB3P26998 211 aa1.13□□□□□ -2.23
HIF1A-212ENST00000557538 DRD3P35462 400 aa1.13□□□□□ -2.23
HIF1A-212ENST00000557538 OPRK1P41145 380 aa1.13□□□□□ -2.23
HIF1A-212ENST00000557538 CCR2P41597 374 aa1.13□□□□□ -2.23
HIF1A-212ENST00000557538 FOXA3P55318 350 aaPredicted RBP1.13□□□□□ -2.23
HIF1A-212ENST00000557538 UBA52P62987 128 aaKnown RBP1.13□□□□□ -2.23
HIF1A-212ENST00000557538 PMVKQ15126 192 aa1.13□□□□□ -2.23
HIF1A-212ENST00000557538 C12orf74Q32Q52 190 aa1.13□□□□□ -2.23
HIF1A-212ENST00000557538 MRPL2Q5T653 305 aaKnown RBP1.13□□□□□ -2.23
HIF1A-212ENST00000557538 OOSP2Q86WS3 158 aa1.13□□□□□ -2.23
HIF1A-212ENST00000557538 SGPP2Q8IWX5 399 aa1.13□□□□□ -2.23
HIF1A-212ENST00000557538 C10orf111Q8N326 155 aa1.13□□□□□ -2.23
HIF1A-212ENST00000557538 LINC00471Q8N535 108 aa1.13□□□□□ -2.23
HIF1A-212ENST00000557538 ZDHHC22Q8N966 263 aa1.13□□□□□ -2.23
HIF1A-212ENST00000557538 OR51A2Q8NGJ7 313 aa1.13□□□□□ -2.23
HIF1A-212ENST00000557538 OR10D3Q8NH80 312 aa1.13□□□□□ -2.23
HIF1A-212ENST00000557538 OR10G6Q8NH81 332 aa1.13□□□□□ -2.23
HIF1A-212ENST00000557538 MCFD2Q8NI22 146 aa1.13□□□□□ -2.23
HIF1A-212ENST00000557538 JOSD2Q8TAC2 188 aa1.13□□□□□ -2.23
HIF1A-212ENST00000557538 TMEM158Q8WZ71 300 aa1.13□□□□□ -2.23
HIF1A-212ENST00000557538 ARPC1AQ92747 370 aa1.13□□□□□ -2.23
HIF1A-212ENST00000557538 BORCS7Q96B45 105 aa1.13□□□□□ -2.23
HIF1A-212ENST00000557538 RNF185Q96GF1 192 aa1.13□□□□□ -2.23
HIF1A-212ENST00000557538 SLC25A44Q96H78 314 aaPredicted RBP1.13□□□□□ -2.23
HIF1A-212ENST00000557538 FAM206AQ9NX38 181 aa1.13□□□□□ -2.23
HIF1A-212ENST00000557538 XCL2Q9UBD3 114 aa1.13□□□□□ -2.23
HIF1A-212ENST00000557538 KLF13Q9Y2Y9 288 aaPredicted RBP1.13□□□□□ -2.23
HIF1A-212ENST00000557538 PAPPA2Q9BXP8 1791 aa1.13□□□□□ -2.23
HIF1A-212ENST00000557538 OBSL1O75147 1896 aa1.13□□□□□ -2.23
HIF1A-212ENST00000557538 GGT3PA6NGU5 568 aa1.13□□□□□ -2.23
HIF1A-212ENST00000557538 GGTLC3B5MD39 225 aa1.13□□□□□ -2.23
HIF1A-212ENST00000557538 RER1O15258 196 aa1.13□□□□□ -2.23
HIF1A-212ENST00000557538 FSTL3O95633 263 aa1.13□□□□□ -2.23
HIF1A-212ENST00000557538 HRASP01112 189 aa1.13□□□□□ -2.23
HIF1A-212ENST00000557538 APOA2P02652 100 aa1.13□□□□□ -2.23
HIF1A-212ENST00000557538 IL3P08700 152 aa1.13□□□□□ -2.23
HIF1A-212ENST00000557538 CTSEP14091 401 aa1.13□□□□□ -2.23
HIF1A-212ENST00000557538 NFYAP23511 347 aaPredicted RBP1.13□□□□□ -2.23
HIF1A-212ENST00000557538 AGTR1P30556 359 aa1.13□□□□□ -2.23
HIF1A-212ENST00000557538 LPAR6P43657 344 aa1.13□□□□□ -2.23
HIF1A-212ENST00000557538 MARCKSL1P49006 195 aa1.13□□□□□ -2.23
HIF1A-212ENST00000557538 PPP1CBP62140 327 aa1.13□□□□□ -2.23
HIF1A-212ENST00000557538 RPS11P62280 158 aaKnown RBP eCLIP1.13□□□□□ -2.23
HIF1A-212ENST00000557538 HIST1H4AP62805 103 aaKnown RBP1.13□□□□□ -2.23
HIF1A-212ENST00000557538 RPS24P62847 133 aaKnown RBP1.13□□□□□ -2.23
HIF1A-212ENST00000557538 DAZ2Q13117 558 aaKnown RBP1.13□□□□□ -2.23
HIF1A-212ENST00000557538 HMGN3Q15651 99 aa1.13□□□□□ -2.23
HIF1A-212ENST00000557538 Q499Y3 187 aa1.13□□□□□ -2.23
HIF1A-212ENST00000557538 EIF5AL1Q6IS14 154 aaKnown RBP1.13□□□□□ -2.23
HIF1A-212ENST00000557538 LCN12Q6JVE5 192 aa1.13□□□□□ -2.23
HIF1A-212ENST00000557538 C12orf54Q6X4T0 127 aa1.13□□□□□ -2.23
HIF1A-212ENST00000557538 SDIM1Q6ZPB5 146 aa1.13□□□□□ -2.23
HIF1A-212ENST00000557538 RFLNAQ6ZTI6 216 aa1.13□□□□□ -2.23
HIF1A-212ENST00000557538 TMEM150AQ86TG1 271 aa1.13□□□□□ -2.23
HIF1A-212ENST00000557538 KCNRGQ8N5I3 272 aa1.13□□□□□ -2.23
HIF1A-212ENST00000557538 LINC00311Q8N616 119 aa1.13□□□□□ -2.23
HIF1A-212ENST00000557538 TMEM252Q8N6L7 170 aa1.13□□□□□ -2.23
HIF1A-212ENST00000557538 OR8B12Q8NGG6 310 aa1.13□□□□□ -2.23
HIF1A-212ENST00000557538 OR2G3Q8NGZ4 309 aa1.13□□□□□ -2.23
HIF1A-212ENST00000557538 LINC00526Q96FQ7 95 aa1.13□□□□□ -2.23
HIF1A-212ENST00000557538 C18orf15Q96N68 181 aa1.13□□□□□ -2.23
HIF1A-212ENST00000557538 SFXN3Q9BWM7 321 aa1.13□□□□□ -2.23
HIF1A-212ENST00000557538 DPY30Q9C005 99 aa1.13□□□□□ -2.23
HIF1A-212ENST00000557538 REEP1Q9H902 201 aa1.13□□□□□ -2.23
HIF1A-212ENST00000557538 DAZ3Q9NR90 486 aaKnown RBP1.13□□□□□ -2.23
HIF1A-212ENST00000557538 C21orf62Q9NYP8 219 aa1.13□□□□□ -2.23
HIF1A-212ENST00000557538 RBM12B-AS1Q9P1G2 102 aa1.13□□□□□ -2.23
HIF1A-212ENST00000557538 UQCR10Q9UDW1 63 aa1.13□□□□□ -2.23
HIF1A-212ENST00000557538 CYSLTR1Q9Y271 337 aa1.13□□□□□ -2.23
HIF1A-212ENST00000557538 MRC1P22897 1456 aa1.13□□□□□ -2.23
HIF1A-212ENST00000557538 CROCCQ5TZA2 2017 aa1.13□□□□□ -2.23
HIF1A-212ENST00000557538 IGLV3-22A0A075B6J6 115 aa1.13□□□□□ -2.23
HIF1A-212ENST00000557538 IGKV1D-8A0A087WSZ0 117 aa1.13□□□□□ -2.23
HIF1A-212ENST00000557538 TRAV14DV4A0A0A6YYC5 116 aa1.13□□□□□ -2.23
HIF1A-212ENST00000557538 A0A0D9SEW6 157 aa1.13□□□□□ -2.23
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms