RNA–Protein interactions for RNA: ENST00000556992.1

SRP54-212, Transcript of signal recognition particle 54, humanhuman

TSL 2

Gene SRP54, Length 529 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-212ENST00000556992 IGHV2-5P01817 119 aa3.54□□□□□ -1.84
SRP54-212ENST00000556992 SRP19P09132 144 aaKnown RBP3.54□□□□□ -1.84
SRP54-212ENST00000556992 FAM106CPP0CH98 169 aa3.54□□□□□ -1.84
SRP54-212ENST00000556992 RNASE2P10153 161 aaKnown RBP3.54□□□□□ -1.84
SRP54-212ENST00000556992 BCL2P10415 239 aa3.54□□□□□ -1.84
SRP54-212ENST00000556992 BRS3P32247 399 aa3.54□□□□□ -1.84
SRP54-212ENST00000556992 UBE2E1P51965 193 aa3.54□□□□□ -1.84
SRP54-212ENST00000556992 RHOBP62745 196 aa3.54□□□□□ -1.84
SRP54-212ENST00000556992 PAX2Q02962 417 aa3.54□□□□□ -1.84
SRP54-212ENST00000556992 GAMTQ14353 236 aa3.54□□□□□ -1.84
SRP54-212ENST00000556992 HNF4GQ14541 408 aa3.54□□□□□ -1.84
SRP54-212ENST00000556992 ZNF726P1Q15940 193 aa3.54□□□□□ -1.84
SRP54-212ENST00000556992 GUCA2BQ16661 112 aa3.54□□□□□ -1.84
SRP54-212ENST00000556992 HAGHQ16775 308 aa3.54□□□□□ -1.84
SRP54-212ENST00000556992 KRTAP21-3Q3LHN1 58 aa3.54□□□□□ -1.84
SRP54-212ENST00000556992 FAM74A3Q4VXF1 159 aa3.54□□□□□ -1.84
SRP54-212ENST00000556992 PVRIGQ6DKI7 326 aa3.54□□□□□ -1.84
SRP54-212ENST00000556992 PPP1R27Q86WC6 154 aa3.54□□□□□ -1.84
SRP54-212ENST00000556992 NPBQ8NG41 125 aa3.54□□□□□ -1.84
SRP54-212ENST00000556992 OR10W1Q8NGF6 305 aa3.54□□□□□ -1.84
SRP54-212ENST00000556992 OR2T10Q8NGZ9 312 aa3.54□□□□□ -1.84
SRP54-212ENST00000556992 OR1P1Q8NH06 330 aa3.54□□□□□ -1.84
SRP54-212ENST00000556992 SLC35E1Q96K37 410 aa3.54□□□□□ -1.84
SRP54-212ENST00000556992 DOCK7Q96N67 2140 aa3.54□□□□□ -1.84
SRP54-212ENST00000556992 RNF2Q99496 336 aa3.54□□□□□ -1.84
SRP54-212ENST00000556992 CCL19Q99731 98 aa3.54□□□□□ -1.84
SRP54-212ENST00000556992 TXNDC17Q9BRA2 123 aa3.54□□□□□ -1.84
SRP54-212ENST00000556992 PIMREGQ9BSJ6 248 aa3.54□□□□□ -1.84
SRP54-212ENST00000556992 VSIRQ9H7M9 311 aa3.54□□□□□ -1.84
SRP54-212ENST00000556992 TUBA4BQ9H853 241 aa3.54□□□□□ -1.84
SRP54-212ENST00000556992 MANBALQ9NQG1 85 aa3.54□□□□□ -1.84
SRP54-212ENST00000556992 SMCO4Q9NRQ5 59 aa3.54□□□□□ -1.84
SRP54-212ENST00000556992 METTL1Q9UBP6 276 aaKnown RBP3.54□□□□□ -1.84
SRP54-212ENST00000556992 TBL2Q9Y4P3 447 aaKnown RBP3.54□□□□□ -1.84
SRP54-212ENST00000556992 PXMP4Q9Y6I8 212 aa3.54□□□□□ -1.84
SRP54-212ENST00000556992 APCP25054 2843 aa3.54□□□□□ -1.84
SRP54-212ENST00000556992 SHANK1Q9Y566 2161 aa3.53□□□□□ -1.84
SRP54-212ENST00000556992 ABCA2Q9BZC7 2435 aa3.53□□□□□ -1.84
SRP54-212ENST00000556992 IGHV3-72A0A0B4J1Y9 119 aa3.53□□□□□ -1.84
SRP54-212ENST00000556992 IGLV5-39A0A0G2JS06 123 aa3.53□□□□□ -1.84
SRP54-212ENST00000556992 A0A1W2PPI3 338 aa3.53□□□□□ -1.84
SRP54-212ENST00000556992 B4DEV8 164 aa3.53□□□□□ -1.84
SRP54-212ENST00000556992 TMEM250H0YL14 139 aa3.53□□□□□ -1.84
SRP54-212ENST00000556992 H3BQ15 152 aa3.53□□□□□ -1.84
SRP54-212ENST00000556992 M0R036 132 aa3.53□□□□□ -1.84
SRP54-212ENST00000556992 DNASE2O00115 360 aaPredicted RBP3.53□□□□□ -1.84
SRP54-212ENST00000556992 TSPAN4O14817 238 aa3.53□□□□□ -1.84
SRP54-212ENST00000556992 PDE6DO43924 150 aa3.53□□□□□ -1.84
SRP54-212ENST00000556992 NDUFS7O75251 213 aa3.53□□□□□ -1.84
SRP54-212ENST00000556992 CLN5O75503 358 aa3.53□□□□□ -1.84
SRP54-212ENST00000556992 YIF1AO95070 293 aa3.53□□□□□ -1.84
SRP54-212ENST00000556992 VENTXO95231 258 aa3.53□□□□□ -1.84
SRP54-212ENST00000556992 CXorf1O96002 111 aa3.53□□□□□ -1.84
SRP54-212ENST00000556992 IGHV4-39P01824 125 aa3.53□□□□□ -1.84
SRP54-212ENST00000556992 FABP1P07148 127 aa3.53□□□□□ -1.84
SRP54-212ENST00000556992 LINC00869P0C866 280 aa3.53□□□□□ -1.84
SRP54-212ENST00000556992 COX6B1P14854 86 aa3.53□□□□□ -1.84
SRP54-212ENST00000556992 MYOD1P15172 320 aa3.53□□□□□ -1.84
SRP54-212ENST00000556992 PAX1P15863 534 aa3.53□□□□□ -1.84
SRP54-212ENST00000556992 ADCYAP1P18509 176 aa3.53□□□□□ -1.84
SRP54-212ENST00000556992 RPL27AP46776 148 aaKnown RBP3.53□□□□□ -1.84
SRP54-212ENST00000556992 CDC34P49427 236 aaPredicted RBP3.53□□□□□ -1.84
SRP54-212ENST00000556992 ATP5J2P56134 94 aa3.53□□□□□ -1.84
SRP54-212ENST00000556992 SELENOTP62341 195 aa3.53□□□□□ -1.84
SRP54-212ENST00000556992 GNB1P62873 340 aa3.53□□□□□ -1.84
SRP54-212ENST00000556992 LCN2P80188 198 aa3.53□□□□□ -1.84
SRP54-212ENST00000556992 WT1-ASQ06250 92 aa3.53□□□□□ -1.84
SRP54-212ENST00000556992 EBI3Q14213 229 aa3.53□□□□□ -1.84
SRP54-212ENST00000556992 PLGLAQ15195 96 aa3.53□□□□□ -1.84
SRP54-212ENST00000556992 RHEBQ15382 184 aa3.53□□□□□ -1.84
SRP54-212ENST00000556992 TNXAQ16473 311 aa3.53□□□□□ -1.84
SRP54-212ENST00000556992 HCP5Q6MZN7 132 aa3.53□□□□□ -1.84
SRP54-212ENST00000556992 ACSM6Q6P461 480 aa3.53□□□□□ -1.84
SRP54-212ENST00000556992 FAM122CQ6P4D5 195 aa3.53□□□□□ -1.84
SRP54-212ENST00000556992 CLEC2AQ6UVW9 174 aa3.53□□□□□ -1.84
SRP54-212ENST00000556992 ATRAIDQ6UW56 229 aa3.53□□□□□ -1.84
SRP54-212ENST00000556992 ZNF562Q6V9R5 426 aa3.53□□□□□ -1.84
SRP54-212ENST00000556992 VMO1Q7Z5L0 202 aa3.53□□□□□ -1.84
SRP54-212ENST00000556992 ZNF114Q8NC26 417 aa3.53□□□□□ -1.84
SRP54-212ENST00000556992 RXFP4Q8TDU9 374 aa3.53□□□□□ -1.84
SRP54-212ENST00000556992 C10orf105Q8TEF2 133 aa3.53□□□□□ -1.84
SRP54-212ENST00000556992 C22orf15Q8WYQ4 148 aa3.53□□□□□ -1.84
SRP54-212ENST00000556992 TVP23CQ96ET8 276 aa3.53□□□□□ -1.84
SRP54-212ENST00000556992 MGST2Q99735 147 aa3.53□□□□□ -1.84
SRP54-212ENST00000556992 NIPSNAP3BQ9BS92 247 aa3.53□□□□□ -1.84
SRP54-212ENST00000556992 GGTLC1Q9BX51 225 aa3.53□□□□□ -1.84
SRP54-212ENST00000556992 SIRPDQ9H106 197 aa3.53□□□□□ -1.84
SRP54-212ENST00000556992 DNAJC4Q9NNZ3 241 aa3.53□□□□□ -1.84
SRP54-212ENST00000556992 SIRT7Q9NRC8 400 aa3.53□□□□□ -1.84
SRP54-212ENST00000556992 TECRQ9NZ01 308 aaKnown RBP3.53□□□□□ -1.84
SRP54-212ENST00000556992 C1RLQ9NZP8 487 aa3.53□□□□□ -1.84
SRP54-212ENST00000556992 PRELID1Q9Y255 219 aa3.53□□□□□ -1.84
SRP54-212ENST00000556992 HILPDAQ9Y5L2 63 aa3.53□□□□□ -1.84
SRP54-212ENST00000556992 SPG11Q96JI7 2443 aa3.52□□□□□ -1.85
SRP54-212ENST00000556992 GTF3C1Q12789 2109 aa3.52□□□□□ -1.85
SRP54-212ENST00000556992 A0A087WWC5 75 aa3.52□□□□□ -1.85
SRP54-212ENST00000556992 IGLC7A0M8Q6 106 aa3.52□□□□□ -1.85
SRP54-212ENST00000556992 C7orf77A4D0Y5 90 aa3.52□□□□□ -1.85
SRP54-212ENST00000556992 CXorf65A6NEN9 183 aa3.52□□□□□ -1.85
SRP54-212ENST00000556992 ZFP92A6NM28 416 aa3.52□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 147.3 ms