RNA–Protein interactions for RNA: ENST00000555585.5

HNRNPC-220, Transcript of heterogeneous nuclear ribonucleoprotein C (C1/C2), humanhuman

TSL 2

Gene HNRNPC, Length 682 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPC-220ENST00000555585 TIGITQ495A1 244 aa7.54□□□□□ -1.2
HNRNPC-220ENST00000555585 FAM122CQ6P4D5 195 aa7.54□□□□□ -1.2
HNRNPC-220ENST00000555585 Q6ZRG5 221 aa7.54□□□□□ -1.2
HNRNPC-220ENST00000555585 FAM223AQ8IWN6 122 aa7.54□□□□□ -1.2
HNRNPC-220ENST00000555585 STPG3Q8N7X2 389 aa7.54□□□□□ -1.2
HNRNPC-220ENST00000555585 NECAP1Q8NC96 275 aa7.54□□□□□ -1.2
HNRNPC-220ENST00000555585 VN1R17PQ8TDU5 208 aa7.54□□□□□ -1.2
HNRNPC-220ENST00000555585 EEF1AKMT3Q96AZ1 226 aa7.54□□□□□ -1.2
HNRNPC-220ENST00000555585 SAT2Q96F10 170 aaPredicted RBP7.54□□□□□ -1.2
HNRNPC-220ENST00000555585 CXorf58Q96LI9 332 aa7.54□□□□□ -1.2
HNRNPC-220ENST00000555585 TRGV9Q99603 122 aa7.54□□□□□ -1.2
HNRNPC-220ENST00000555585 SLC39A9Q9NUM3 307 aa7.54□□□□□ -1.2
HNRNPC-220ENST00000555585 ZNF580Q9UK33 172 aa7.54□□□□□ -1.2
HNRNPC-220ENST00000555585 OTOGQ6ZRI0 2925 aa7.54□□□□□ -1.2
HNRNPC-220ENST00000555585 BAHCC1Q9P281 2608 aa7.53□□□□□ -1.2
HNRNPC-220ENST00000555585 ZFHX3Q15911 3703 aa7.53□□□□□ -1.2
HNRNPC-220ENST00000555585 TRAV30A0A087WSZ9 112 aa7.53□□□□□ -1.2
HNRNPC-220ENST00000555585 PSMB11A5LHX3 300 aa7.53□□□□□ -1.2
HNRNPC-220ENST00000555585 CLDN34H7C241 214 aa7.53□□□□□ -1.2
HNRNPC-220ENST00000555585 SCGB2A1O75556 95 aa7.53□□□□□ -1.2
HNRNPC-220ENST00000555585 FABP1P07148 127 aa7.53□□□□□ -1.2
HNRNPC-220ENST00000555585 RNASE1P07998 156 aaKnown RBP7.53□□□□□ -1.2
HNRNPC-220ENST00000555585 LINC00869P0C866 280 aa7.53□□□□□ -1.2
HNRNPC-220ENST00000555585 M6PRP20645 277 aa7.53□□□□□ -1.2
HNRNPC-220ENST00000555585 FHITP49789 147 aa7.53□□□□□ -1.2
HNRNPC-220ENST00000555585 HILS1P60008 231 aa7.53□□□□□ -1.2
HNRNPC-220ENST00000555585 SELENOTP62341 195 aa7.53□□□□□ -1.2
HNRNPC-220ENST00000555585 SLC35B1P78383 322 aa7.53□□□□□ -1.2
HNRNPC-220ENST00000555585 CFHR3Q02985 330 aa7.53□□□□□ -1.2
HNRNPC-220ENST00000555585 ZNF90Q03938 601 aa7.53□□□□□ -1.2
HNRNPC-220ENST00000555585 KLK9Q2XQG4 91 aa7.53□□□□□ -1.2
HNRNPC-220ENST00000555585 C15orf32Q32M92 178 aa7.53□□□□□ -1.2
HNRNPC-220ENST00000555585 DPPA3Q6W0C5 159 aa7.53□□□□□ -1.2
HNRNPC-220ENST00000555585 ZNF329Q86UD4 541 aa7.53□□□□□ -1.2
HNRNPC-220ENST00000555585 OR10G4Q8NGN3 311 aa7.53□□□□□ -1.2
HNRNPC-220ENST00000555585 OR10G9Q8NGN4 311 aa7.53□□□□□ -1.2
HNRNPC-220ENST00000555585 OR10G7Q8NGN6 311 aa7.53□□□□□ -1.2
HNRNPC-220ENST00000555585 TXN2Q99757 166 aa7.53□□□□□ -1.2
HNRNPC-220ENST00000555585 RPRMQ9NS64 109 aa7.53□□□□□ -1.2
HNRNPC-220ENST00000555585 KLK9Q9UKQ9 250 aa7.53□□□□□ -1.2
HNRNPC-220ENST00000555585 ACANP16112 2415 aa7.52□□□□□ -1.2
HNRNPC-220ENST00000555585 A0A1B0GV50 99 aa7.52□□□□□ -1.21
HNRNPC-220ENST00000555585 OR2T8A6NH00 312 aa7.52□□□□□ -1.21
HNRNPC-220ENST00000555585 CRLF1O75462 422 aa7.52□□□□□ -1.21
HNRNPC-220ENST00000555585 YIF1AO95070 293 aa7.52□□□□□ -1.21
HNRNPC-220ENST00000555585 BRI3O95415 125 aa7.52□□□□□ -1.21
HNRNPC-220ENST00000555585 IGLV1-40P01703 118 aa7.52□□□□□ -1.21
HNRNPC-220ENST00000555585 H2AFB1P0C5Y9 115 aa7.52□□□□□ -1.21
HNRNPC-220ENST00000555585 IGLC1P0CG04 106 aa7.52□□□□□ -1.21
HNRNPC-220ENST00000555585 NDUFA5Q16718 116 aa7.52□□□□□ -1.21
HNRNPC-220ENST00000555585 GCSAMLQ5JQS6 135 aa7.52□□□□□ -1.21
HNRNPC-220ENST00000555585 PXDC1Q5TGL8 231 aa7.52□□□□□ -1.21
HNRNPC-220ENST00000555585 Q6ZSV7 163 aa7.52□□□□□ -1.21
HNRNPC-220ENST00000555585 Q8N2B8 174 aa7.52□□□□□ -1.21
HNRNPC-220ENST00000555585 ZNF502Q8TBZ5 544 aa7.52□□□□□ -1.21
HNRNPC-220ENST00000555585 ACTR3CQ9C0K3 210 aaPredicted RBP7.52□□□□□ -1.21
HNRNPC-220ENST00000555585 KLK15Q9H2R5 256 aa7.52□□□□□ -1.21
HNRNPC-220ENST00000555585 HRH4Q9H3N8 390 aa7.52□□□□□ -1.21
HNRNPC-220ENST00000555585 DOK5Q9P104 306 aa7.52□□□□□ -1.21
HNRNPC-220ENST00000555585 PFDN2Q9UHV9 154 aa7.52□□□□□ -1.21
HNRNPC-220ENST00000555585 ANK3Q12955 4377 aaKnown RBP7.52□□□□□ -1.21
HNRNPC-220ENST00000555585 NOTCH2Q04721 2471 aa7.51□□□□□ -1.21
HNRNPC-220ENST00000555585 TRBV7-1A0A0A6YYK4 115 aa7.51□□□□□ -1.21
HNRNPC-220ENST00000555585 A0A0G2JLM5 398 aa7.51□□□□□ -1.21
HNRNPC-220ENST00000555585 A0A1W2PPV4 95 aa7.51□□□□□ -1.21
HNRNPC-220ENST00000555585 TMEM89A2RUT3 159 aa7.51□□□□□ -1.21
HNRNPC-220ENST00000555585 TEX46H3BTG2 121 aa7.51□□□□□ -1.21
HNRNPC-220ENST00000555585 TCF21O43680 179 aa7.51□□□□□ -1.21
HNRNPC-220ENST00000555585 COX7A2P2O60397 106 aa7.51□□□□□ -1.21
HNRNPC-220ENST00000555585 EIF3GO75821 320 aaKnown RBP eCLIP7.51□□□□□ -1.21
HNRNPC-220ENST00000555585 IGHG4P01861 327 aa7.51□□□□□ -1.21
HNRNPC-220ENST00000555585 RD3LP0DJH9 198 aa7.51□□□□□ -1.21
HNRNPC-220ENST00000555585 FCGR2BP31994 310 aaPredicted RBP7.51□□□□□ -1.21
HNRNPC-220ENST00000555585 GPR183P32249 361 aa7.51□□□□□ -1.21
HNRNPC-220ENST00000555585 CDC34P49427 236 aaPredicted RBP7.51□□□□□ -1.21
HNRNPC-220ENST00000555585 RAB9AP51151 201 aa7.51□□□□□ -1.21
HNRNPC-220ENST00000555585 RPL15P61313 204 aaKnown RBP7.51□□□□□ -1.21
HNRNPC-220ENST00000555585 TEX38Q6PEX7 206 aa7.51□□□□□ -1.21
HNRNPC-220ENST00000555585 C10orf99Q6UWK7 81 aa7.51□□□□□ -1.21
HNRNPC-220ENST00000555585 LCN15Q6UWW0 184 aa7.51□□□□□ -1.21
HNRNPC-220ENST00000555585 CLEC19AQ6UXS0 136 aa7.51□□□□□ -1.21
HNRNPC-220ENST00000555585 LCNL1Q6ZST4 164 aa7.51□□□□□ -1.21
HNRNPC-220ENST00000555585 SLC7A5P1Q8MH63 180 aa7.51□□□□□ -1.21
HNRNPC-220ENST00000555585 OR1L4Q8NGR5 311 aa7.51□□□□□ -1.21
HNRNPC-220ENST00000555585 SFT2D1Q8WV19 159 aa7.51□□□□□ -1.21
HNRNPC-220ENST00000555585 USMG5Q96IX5 58 aa7.51□□□□□ -1.21
HNRNPC-220ENST00000555585 SLC25A22Q9H936 323 aa7.51□□□□□ -1.21
HNRNPC-220ENST00000555585 GNB4Q9HAV0 340 aa7.51□□□□□ -1.21
HNRNPC-220ENST00000555585 SERTAD4Q9NUC0 356 aa7.51□□□□□ -1.21
HNRNPC-220ENST00000555585 GAR1Q9NY12 217 aaKnown RBP7.51□□□□□ -1.21
HNRNPC-220ENST00000555585 MXRA5Q9NR99 2828 aa7.5□□□□□ -1.21
HNRNPC-220ENST00000555585 CTXND1A0A1B0GTU2 59 aa7.5□□□□□ -1.21
HNRNPC-220ENST00000555585 MAP1LC3B2A6NCE7 125 aa7.5□□□□□ -1.21
HNRNPC-220ENST00000555585 LINC00862A6NCI5 91 aa7.5□□□□□ -1.21
HNRNPC-220ENST00000555585 F8W735 103 aaPredicted RBP7.5□□□□□ -1.21
HNRNPC-220ENST00000555585 HMGB3O15347 200 aaKnown RBP7.5□□□□□ -1.21
HNRNPC-220ENST00000555585 NUPL2O15504 423 aaKnown RBP7.5□□□□□ -1.21
HNRNPC-220ENST00000555585 TOMM40O96008 361 aa7.5□□□□□ -1.21
HNRNPC-220ENST00000555585 IGKV1-17P01599 117 aa7.5□□□□□ -1.21
HNRNPC-220ENST00000555585 IGHV3-11P01762 117 aa7.5□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 77.4 ms