RNA–Protein interactions for RNA: ENST00000555386.5

PSEN1-213, Transcript of presenilin 1, humanhuman

TSL 1 (best)

Gene PSEN1, Length 1,484 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-213ENST00000555386 C15orf61A6NNL5 157 aa7.8□□□□□ -1.16
PSEN1-213ENST00000555386 SEC14L6B5MCN3 397 aa7.8□□□□□ -1.16
PSEN1-213ENST00000555386 NBR2O15453 112 aa7.8□□□□□ -1.16
PSEN1-213ENST00000555386 TGOLN2O43493 480 aa7.8□□□□□ -1.16
PSEN1-213ENST00000555386 HRASP01112 189 aa7.8□□□□□ -1.16
PSEN1-213ENST00000555386 S100A6P06703 90 aa7.8□□□□□ -1.16
PSEN1-213ENST00000555386 PSMB3P49720 205 aa7.8□□□□□ -1.16
PSEN1-213ENST00000555386 ATP5IP56385 69 aaPredicted RBP7.8□□□□□ -1.16
PSEN1-213ENST00000555386 RPL15P61313 204 aaKnown RBP7.8□□□□□ -1.16
PSEN1-213ENST00000555386 MEF2BQ02080 365 aaPredicted RBP7.8□□□□□ -1.16
PSEN1-213ENST00000555386 EBI3Q14213 229 aa7.8□□□□□ -1.16
PSEN1-213ENST00000555386 KRTAP21-3Q3LHN1 58 aa7.8□□□□□ -1.16
PSEN1-213ENST00000555386 FFAR4Q5NUL3 377 aa7.8□□□□□ -1.16
PSEN1-213ENST00000555386 SSX7Q7RTT5 188 aa7.8□□□□□ -1.16
PSEN1-213ENST00000555386 PDPNQ86YL7 162 aa7.8□□□□□ -1.16
PSEN1-213ENST00000555386 Q8N6K4 173 aa7.8□□□□□ -1.16
PSEN1-213ENST00000555386 Q8N9W7 124 aa7.8□□□□□ -1.16
PSEN1-213ENST00000555386 ISOC2Q96AB3 205 aa7.8□□□□□ -1.16
PSEN1-213ENST00000555386 HARBI1Q96MB7 349 aa7.8□□□□□ -1.16
PSEN1-213ENST00000555386 CTDSP1Q9GZU7 261 aa7.8□□□□□ -1.16
PSEN1-213ENST00000555386 TMEM140Q9NV12 185 aa7.8□□□□□ -1.16
PSEN1-213ENST00000555386 FOXA2Q9Y261 457 aaPredicted RBP7.8□□□□□ -1.16
PSEN1-213ENST00000555386 SMCO3A2RU48 225 aa7.79□□□□□ -1.16
PSEN1-213ENST00000555386 LINC01548A6NM66 108 aa7.79□□□□□ -1.16
PSEN1-213ENST00000555386 FNDC10F2Z333 226 aa7.79□□□□□ -1.16
PSEN1-213ENST00000555386 M0QZK8 103 aa7.79□□□□□ -1.16
PSEN1-213ENST00000555386 UBE2CO00762 179 aa7.79□□□□□ -1.16
PSEN1-213ENST00000555386 SLC25A17O43808 307 aa7.79□□□□□ -1.16
PSEN1-213ENST00000555386 OPRK1P41145 380 aa7.79□□□□□ -1.16
PSEN1-213ENST00000555386 CEBPGP53567 150 aa7.79□□□□□ -1.16
PSEN1-213ENST00000555386 FGF8P55075 233 aaPredicted RBP7.79□□□□□ -1.16
PSEN1-213ENST00000555386 GNB1P62873 340 aa7.79□□□□□ -1.16
PSEN1-213ENST00000555386 KLHDC1Q8N7A1 406 aa7.79□□□□□ -1.16
PSEN1-213ENST00000555386 ABHD5Q8WTS1 349 aa7.79□□□□□ -1.16
PSEN1-213ENST00000555386 NOL4LQ96MY1 436 aaPredicted RBP7.79□□□□□ -1.16
PSEN1-213ENST00000555386 SDF2L1Q9HCN8 221 aa7.79□□□□□ -1.16
PSEN1-213ENST00000555386 HEYLQ9NQ87 328 aaPredicted RBP7.79□□□□□ -1.16
PSEN1-213ENST00000555386 TMEM14BQ9NUH8 114 aa7.79□□□□□ -1.16
PSEN1-213ENST00000555386 METTL1Q9UBP6 276 aaKnown RBP7.79□□□□□ -1.16
PSEN1-213ENST00000555386 ZNF257Q9Y2Q1 563 aa7.79□□□□□ -1.16
PSEN1-213ENST00000555386 WNK1Q9H4A3 2382 aa7.78□□□□□ -1.16
PSEN1-213ENST00000555386 PRSS46E5RG02 174 aa7.78□□□□□ -1.16
PSEN1-213ENST00000555386 IFNA10P01566 189 aa7.78□□□□□ -1.16
PSEN1-213ENST00000555386 S100A8P05109 93 aa7.78□□□□□ -1.16
PSEN1-213ENST00000555386 RND2P52198 227 aa7.78□□□□□ -1.16
PSEN1-213ENST00000555386 HSPE1P61604 102 aaKnown RBP7.78□□□□□ -1.16
PSEN1-213ENST00000555386 PSG5Q15238 335 aa7.78□□□□□ -1.16
PSEN1-213ENST00000555386 ELOBQ15370 118 aa7.78□□□□□ -1.16
PSEN1-213ENST00000555386 C5orf64Q2M2E5 130 aa7.78□□□□□ -1.16
PSEN1-213ENST00000555386 CYP2G1PQ6ZSU1 146 aa7.78□□□□□ -1.16
PSEN1-213ENST00000555386 SSX9Q7RTT3 188 aa7.78□□□□□ -1.16
PSEN1-213ENST00000555386 VKORC1L1Q8N0U8 176 aa7.78□□□□□ -1.16
PSEN1-213ENST00000555386 ZFP82Q8N141 532 aa7.78□□□□□ -1.16
PSEN1-213ENST00000555386 C2CD4CQ8TF44 421 aa7.78□□□□□ -1.16
PSEN1-213ENST00000555386 HSPB9Q9BQS6 159 aa7.78□□□□□ -1.16
PSEN1-213ENST00000555386 TXNDC17Q9BRA2 123 aa7.78□□□□□ -1.16
PSEN1-213ENST00000555386 TCEAL7Q9BRU2 100 aa7.78□□□□□ -1.16
PSEN1-213ENST00000555386 C16orf95Q9H693 158 aa7.78□□□□□ -1.16
PSEN1-213ENST00000555386 TPSG1Q9NRR2 321 aa7.78□□□□□ -1.16
PSEN1-213ENST00000555386 NAT8Q9UHE5 227 aa7.78□□□□□ -1.16
PSEN1-213ENST00000555386 PRNDQ9UKY0 176 aa7.78□□□□□ -1.16
PSEN1-213ENST00000555386 SRRM4A7MD48 611 aaKnown RBP7.77□□□□□ -1.17
PSEN1-213ENST00000555386 ZNF727A8MUV8 499 aa7.77□□□□□ -1.17
PSEN1-213ENST00000555386 FCN1O00602 326 aa7.77□□□□□ -1.17
PSEN1-213ENST00000555386 RRHO14718 337 aa7.77□□□□□ -1.17
PSEN1-213ENST00000555386 KBTBD11O94819 623 aa7.77□□□□□ -1.17
PSEN1-213ENST00000555386 IL6RP08887 468 aaPredicted RBP7.77□□□□□ -1.17
PSEN1-213ENST00000555386 CDC34P49427 236 aaPredicted RBP7.77□□□□□ -1.17
PSEN1-213ENST00000555386 AKR1D1P51857 326 aa7.77□□□□□ -1.17
PSEN1-213ENST00000555386 CD81P60033 236 aa7.77□□□□□ -1.17
PSEN1-213ENST00000555386 OR4A47Q6IF82 309 aa7.77□□□□□ -1.17
PSEN1-213ENST00000555386 C10orf99Q6UWK7 81 aa7.77□□□□□ -1.17
PSEN1-213ENST00000555386 RAB24Q969Q5 203 aa7.77□□□□□ -1.17
PSEN1-213ENST00000555386 SLC25A22Q9H936 323 aa7.77□□□□□ -1.17
PSEN1-213ENST00000555386 NPVFQ9HCQ7 196 aa7.77□□□□□ -1.17
PSEN1-213ENST00000555386 ENY2Q9NPA8 101 aa7.77□□□□□ -1.17
PSEN1-213ENST00000555386 SERTAD4Q9NUC0 356 aa7.77□□□□□ -1.17
PSEN1-213ENST00000555386 FKBP11Q9NYL4 201 aa7.77□□□□□ -1.17
PSEN1-213ENST00000555386 TET2Q6N021 2002 aaPredicted RBP7.77□□□□□ -1.17
PSEN1-213ENST00000555386 A0A1B0GUS0 222 aa7.76□□□□□ -1.17
PSEN1-213ENST00000555386 ZNF98A6NK75 572 aa7.76□□□□□ -1.17
PSEN1-213ENST00000555386 CNIH1O95406 144 aa7.76□□□□□ -1.17
PSEN1-213ENST00000555386 CA2P00918 260 aa7.76□□□□□ -1.17
PSEN1-213ENST00000555386 OPN1MWP04001 364 aa7.76□□□□□ -1.17
PSEN1-213ENST00000555386 OPN1MW2P0DN77 364 aa7.76□□□□□ -1.17
PSEN1-213ENST00000555386 OPN1MW3P0DN78 364 aa7.76□□□□□ -1.17
PSEN1-213ENST00000555386 SMCPP49901 116 aaPredicted RBP7.76□□□□□ -1.17
PSEN1-213ENST00000555386 PROK1P58294 105 aa7.76□□□□□ -1.17
PSEN1-213ENST00000555386 KRTAP10-3P60369 221 aa7.76□□□□□ -1.17
PSEN1-213ENST00000555386 SNRPEP62304 92 aaKnown RBP7.76□□□□□ -1.17
PSEN1-213ENST00000555386 TMEM241Q24JQ0 296 aa7.76□□□□□ -1.17
PSEN1-213ENST00000555386 SPINK9Q5DT21 86 aa7.76□□□□□ -1.17
PSEN1-213ENST00000555386 TREML4Q6UXN2 200 aa7.76□□□□□ -1.17
PSEN1-213ENST00000555386 ZNF329Q86UD4 541 aa7.76□□□□□ -1.17
PSEN1-213ENST00000555386 NPBQ8NG41 125 aa7.76□□□□□ -1.17
PSEN1-213ENST00000555386 SMIM7Q9BQ49 75 aa7.76□□□□□ -1.17
PSEN1-213ENST00000555386 TRRAPQ9Y4A5 3859 aa7.76□□□□□ -1.17
PSEN1-213ENST00000555386 CMYA5Q8N3K9 4069 aa7.76□□□□□ -1.17
PSEN1-213ENST00000555386 TRAV3A0A0B4J244 114 aa7.75□□□□□ -1.17
PSEN1-213ENST00000555386 AP4M1O00189 453 aa7.75□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms