RNA–Protein interactions for RNA: ENST00000554079.1

SIX4-202, Transcript of SIX homeobox 4, humanhuman

TSL 1 (best)

Gene SIX4, Length 2,003 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIX4-202ENST00000554079 B4GALT1P15291 398 aa7.76□□□□□ -1.17
SIX4-202ENST00000554079 C5orf47Q569G3 176 aa7.76□□□□□ -1.17
SIX4-202ENST00000554079 SLC25A53Q5H9E4 307 aa7.76□□□□□ -1.17
SIX4-202ENST00000554079 CFAP126Q5VTH2 177 aa7.76□□□□□ -1.17
SIX4-202ENST00000554079 PIP4P1Q86T03 277 aa7.76□□□□□ -1.17
SIX4-202ENST00000554079 LINC00479Q96M42 142 aa7.76□□□□□ -1.17
SIX4-202ENST00000554079 CEP290O15078 2479 aa7.76□□□□□ -1.17
SIX4-202ENST00000554079 UNC13CQ8NB66 2214 aa7.76□□□□□ -1.17
SIX4-202ENST00000554079 A0A1W2PP55 124 aa7.76□□□□□ -1.17
SIX4-202ENST00000554079 C17orf98A8MV24 154 aa7.76□□□□□ -1.17
SIX4-202ENST00000554079 SLC25A5P05141 298 aaKnown RBP7.76□□□□□ -1.17
SIX4-202ENST00000554079 LTBRP36941 435 aa7.76□□□□□ -1.17
SIX4-202ENST00000554079 NMUP48645 174 aa7.76□□□□□ -1.17
SIX4-202ENST00000554079 NDUFV3P56181 108 aaKnown RBP7.76□□□□□ -1.17
SIX4-202ENST00000554079 CST6Q15828 149 aa7.76□□□□□ -1.17
SIX4-202ENST00000554079 C2orf27AQ580R0 203 aa7.76□□□□□ -1.17
SIX4-202ENST00000554079 CEND1Q8N111 149 aa7.76□□□□□ -1.17
SIX4-202ENST00000554079 SMRP1Q8NCR6 262 aa7.76□□□□□ -1.17
SIX4-202ENST00000554079 PIFOQ8TCI5 191 aa7.76□□□□□ -1.17
SIX4-202ENST00000554079 CARD19Q96LW7 228 aa7.76□□□□□ -1.17
SIX4-202ENST00000554079 AP5S1Q9NUS5 200 aa7.76□□□□□ -1.17
SIX4-202ENST00000554079 TCF19Q9Y242 345 aa7.76□□□□□ -1.17
SIX4-202ENST00000554079 RANBP2P49792 3224 aaKnown RBP7.75□□□□□ -1.17
SIX4-202ENST00000554079 A0A1W2PQU0 124 aa7.75□□□□□ -1.17
SIX4-202ENST00000554079 ACTL6BO94805 426 aa7.75□□□□□ -1.17
SIX4-202ENST00000554079 APOHP02749 345 aaPredicted RBP7.75□□□□□ -1.17
SIX4-202ENST00000554079 CSN1S1P47710 185 aa7.75□□□□□ -1.17
SIX4-202ENST00000554079 CACNG7P62955 275 aa7.75□□□□□ -1.17
SIX4-202ENST00000554079 RRN3P1Q2M238 152 aa7.75□□□□□ -1.17
SIX4-202ENST00000554079 TMEM240Q5SV17 173 aa7.75□□□□□ -1.17
SIX4-202ENST00000554079 H2BFWTQ7Z2G1 175 aa7.75□□□□□ -1.17
SIX4-202ENST00000554079 OR8A1Q8NGG7 326 aa7.75□□□□□ -1.17
SIX4-202ENST00000554079 FGFBP3Q8TAT2 258 aa7.75□□□□□ -1.17
SIX4-202ENST00000554079 CSDC2Q9Y534 153 aaKnown RBP7.75□□□□□ -1.17
SIX4-202ENST00000554079 AGRNO00468 2067 aa7.75□□□□□ -1.17
SIX4-202ENST00000554079 TRAV5A0A0B4J249 113 aa7.74□□□□□ -1.17
SIX4-202ENST00000554079 TMEM150CB9EJG8 249 aa7.74□□□□□ -1.17
SIX4-202ENST00000554079 LTAP01374 205 aa7.74□□□□□ -1.17
SIX4-202ENST00000554079 CSN3P07498 182 aa7.74□□□□□ -1.17
SIX4-202ENST00000554079 CA6P23280 308 aa7.74□□□□□ -1.17
SIX4-202ENST00000554079 MEOX1P50221 254 aa7.74□□□□□ -1.17
SIX4-202ENST00000554079 RPS21P63220 83 aaKnown RBP7.74□□□□□ -1.17
SIX4-202ENST00000554079 ANXA2RQ3ZCQ2 193 aa7.74□□□□□ -1.17
SIX4-202ENST00000554079 LILRA6Q6PI73 481 aa7.74□□□□□ -1.17
SIX4-202ENST00000554079 LINC00596Q86U02 117 aa7.74□□□□□ -1.17
SIX4-202ENST00000554079 KIR2DL4Q99706 377 aa7.74□□□□□ -1.17
SIX4-202ENST00000554079 C12orf49Q9H741 205 aa7.74□□□□□ -1.17
SIX4-202ENST00000554079 MRPS17Q9Y2R5 130 aaKnown RBP7.74□□□□□ -1.17
SIX4-202ENST00000554079 XIRP2A4UGR9 3374 aa7.74□□□□□ -1.17
SIX4-202ENST00000554079 K7EMI3 77 aa7.74□□□□□ -1.17
SIX4-202ENST00000554079 ZNF137PP52743 207 aa7.74□□□□□ -1.17
SIX4-202ENST00000554079 C12orf74Q32Q52 190 aa7.74□□□□□ -1.17
SIX4-202ENST00000554079 RPRMLQ8N4K4 120 aa7.74□□□□□ -1.17
SIX4-202ENST00000554079 ZBTB34Q8NCN2 500 aa7.74□□□□□ -1.17
SIX4-202ENST00000554079 UBALD1Q8TB05 177 aa7.74□□□□□ -1.17
SIX4-202ENST00000554079 PPDPFLQ8WWR9 84 aa7.74□□□□□ -1.17
SIX4-202ENST00000554079 PTH2Q96A98 100 aa7.74□□□□□ -1.17
SIX4-202ENST00000554079 PLEKHA3Q9HB20 300 aa7.74□□□□□ -1.17
SIX4-202ENST00000554079 DLL3Q9NYJ7 618 aa7.74□□□□□ -1.17
SIX4-202ENST00000554079 IGKV2D-26A0A0A0MRZ7 120 aa7.73□□□□□ -1.17
SIX4-202ENST00000554079 KIR2DS3K7RE56 304 aa7.73□□□□□ -1.17
SIX4-202ENST00000554079 SRSF1Q07955 248 aaKnown RBP eCLIP7.73□□□□□ -1.17
SIX4-202ENST00000554079 ADIPOQQ15848 244 aa7.73□□□□□ -1.17
SIX4-202ENST00000554079 FAM27BQ5VT28 67 aa7.73□□□□□ -1.17
SIX4-202ENST00000554079 Q6P435 159 aa7.73□□□□□ -1.17
SIX4-202ENST00000554079 OR9G1Q8NH87 305 aa7.73□□□□□ -1.17
SIX4-202ENST00000554079 NRGNQ92686 78 aa7.73□□□□□ -1.17
SIX4-202ENST00000554079 ZNF837Q96EG3 531 aaPredicted RBP7.73□□□□□ -1.17
SIX4-202ENST00000554079 VCX2Q9H322 139 aa7.73□□□□□ -1.17
SIX4-202ENST00000554079 RPP21Q9H633 154 aaKnown RBP7.73□□□□□ -1.17
SIX4-202ENST00000554079 FER1L5A0AVI2 2057 aa7.73□□□□□ -1.17
SIX4-202ENST00000554079 KIR2DS5A0A0G2JLQ3 304 aa7.73□□□□□ -1.17
SIX4-202ENST00000554079 A0A0G2JNG1 304 aa7.73□□□□□ -1.17
SIX4-202ENST00000554079 OTOL1A6NHN0 477 aaPredicted RBP7.73□□□□□ -1.17
SIX4-202ENST00000554079 CHEK1O14757 476 aa7.73□□□□□ -1.17
SIX4-202ENST00000554079 WIPF1O43516 503 aa7.73□□□□□ -1.17
SIX4-202ENST00000554079 CXCL10P02778 98 aa7.73□□□□□ -1.17
SIX4-202ENST00000554079 ACP1P24666 158 aa7.73□□□□□ -1.17
SIX4-202ENST00000554079 CD27P26842 260 aa7.73□□□□□ -1.17
SIX4-202ENST00000554079 MPV17P39210 176 aa7.73□□□□□ -1.17
SIX4-202ENST00000554079 KIR2DS5Q14953 304 aa7.73□□□□□ -1.17
SIX4-202ENST00000554079 CT83Q5H943 113 aa7.73□□□□□ -1.17
SIX4-202ENST00000554079 AJUBAQ96IF1 538 aa7.73□□□□□ -1.17
SIX4-202ENST00000554079 PGLYRP4Q96LB8 373 aa7.73□□□□□ -1.17
SIX4-202ENST00000554079 NABP2Q9BQ15 211 aa7.73□□□□□ -1.17
SIX4-202ENST00000554079 PRSS22Q9GZN4 317 aa7.73□□□□□ -1.17
SIX4-202ENST00000554079 DEC1Q9P2X7 70 aa7.73□□□□□ -1.17
SIX4-202ENST00000554079 MED12Q93074 2177 aa7.73□□□□□ -1.17
SIX4-202ENST00000554079 TRBV25-1A0A075B6N4 114 aa7.72□□□□□ -1.17
SIX4-202ENST00000554079 TMEM8BA6NDV4 472 aa7.72□□□□□ -1.17
SIX4-202ENST00000554079 B9A039 149 aa7.72□□□□□ -1.17
SIX4-202ENST00000554079 OVOL3O00110 214 aa7.72□□□□□ -1.17
SIX4-202ENST00000554079 PEX7O00628 323 aa7.72□□□□□ -1.17
SIX4-202ENST00000554079 GFRA3O60609 400 aa7.72□□□□□ -1.17
SIX4-202ENST00000554079 FCN3O75636 299 aa7.72□□□□□ -1.17
SIX4-202ENST00000554079 FAM106CPP0CH98 169 aa7.72□□□□□ -1.17
SIX4-202ENST00000554079 LOXL1Q08397 574 aaPredicted RBP7.72□□□□□ -1.17
SIX4-202ENST00000554079 FAM106AQ4KMX7 169 aa7.72□□□□□ -1.17
SIX4-202ENST00000554079 C16orf47Q6ZP98 133 aaPredicted RBP7.72□□□□□ -1.17
SIX4-202ENST00000554079 WDR31Q8NA23 367 aa7.72□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms