RNA–Protein interactions for RNA: ENST00000553923.1

SRP54-204, Transcript of signal recognition particle 54, humanhuman

TSL 2

Gene SRP54, Length 573 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-204ENST00000553923 MT-ND6P03923 174 aa1.31□□□□□ -2.2
SRP54-204ENST00000553923 IGKV1-16P04430 117 aa1.31□□□□□ -2.2
SRP54-204ENST00000553923 CCL5P13501 91 aa1.31□□□□□ -2.2
SRP54-204ENST00000553923 FKBP2P26885 142 aaKnown RBP1.31□□□□□ -2.2
SRP54-204ENST00000553923 HINT1P49773 126 aaPredicted RBP1.31□□□□□ -2.2
SRP54-204ENST00000553923 DYNLT3P51808 116 aa1.31□□□□□ -2.2
SRP54-204ENST00000553923 ARPP19P56211 112 aa1.31□□□□□ -2.2
SRP54-204ENST00000553923 LINC00315P59091 139 aa1.31□□□□□ -2.2
SRP54-204ENST00000553923 RPS28P62857 69 aaKnown RBP1.31□□□□□ -2.2
SRP54-204ENST00000553923 SUPT4H1P63272 117 aaKnown RBP1.31□□□□□ -2.2
SRP54-204ENST00000553923 HIST1H1AQ02539 215 aaPredicted RBP1.31□□□□□ -2.2
SRP54-204ENST00000553923 EIF3IQ13347 325 aaKnown RBP1.31□□□□□ -2.2
SRP54-204ENST00000553923 EBI3Q14213 229 aa1.31□□□□□ -2.2
SRP54-204ENST00000553923 DEFB134Q4QY38 66 aa1.31□□□□□ -2.2
SRP54-204ENST00000553923 RPL13AP3Q6NVV1 102 aa1.31□□□□□ -2.2
SRP54-204ENST00000553923 LINC00305Q7Z4B0 112 aa1.31□□□□□ -2.2
SRP54-204ENST00000553923 LHFPL1Q86WI0 220 aa1.31□□□□□ -2.2
SRP54-204ENST00000553923 RPP25LQ8N5L8 163 aaKnown RBP1.31□□□□□ -2.2
SRP54-204ENST00000553923 TEX29Q8N6K0 151 aa1.31□□□□□ -2.2
SRP54-204ENST00000553923 SIGLECL1Q8N7X8 197 aa1.31□□□□□ -2.2
SRP54-204ENST00000553923 Q8NAQ8 132 aa1.31□□□□□ -2.2
SRP54-204ENST00000553923 OR4E2Q8NGC2 313 aa1.31□□□□□ -2.2
SRP54-204ENST00000553923 BRK1Q8WUW1 75 aa1.31□□□□□ -2.2
SRP54-204ENST00000553923 CANT1Q8WVQ1 401 aa1.31□□□□□ -2.2
SRP54-204ENST00000553923 TEX37Q96LM6 180 aa1.31□□□□□ -2.2
SRP54-204ENST00000553923 YPEL2Q96QA6 119 aa1.31□□□□□ -2.2
SRP54-204ENST00000553923 LXNQ9BS40 222 aa1.31□□□□□ -2.2
SRP54-204ENST00000553923 PRADC1Q9BSG0 188 aa1.31□□□□□ -2.2
SRP54-204ENST00000553923 NPCDR1Q9BY65 106 aa1.31□□□□□ -2.2
SRP54-204ENST00000553923 KRTAP4-1Q9BYQ7 146 aa1.31□□□□□ -2.2
SRP54-204ENST00000553923 TCEAL2Q9H3H9 227 aaPredicted RBP1.31□□□□□ -2.2
SRP54-204ENST00000553923 EPDR1Q9UM22 224 aa1.31□□□□□ -2.2
SRP54-204ENST00000553923 HIGD1AQ9Y241 93 aa1.31□□□□□ -2.2
SRP54-204ENST00000553923 R4GN34 69 aa1.31□□□□□ -2.2
SRP54-204ENST00000553923 U3KQ87 197 aa1.31□□□□□ -2.2
SRP54-204ENST00000553923 HIVEP2P31629 2446 aa1.31□□□□□ -2.2
SRP54-204ENST00000553923 PIKFYVEQ9Y2I7 2098 aa1.31□□□□□ -2.2
SRP54-204ENST00000553923 TRGV10A0A0A0MS01 117 aa1.3□□□□□ -2.2
SRP54-204ENST00000553923 TRGV5A0A0B4J1U4 118 aa1.3□□□□□ -2.2
SRP54-204ENST00000553923 TRAV5A0A0B4J249 113 aa1.3□□□□□ -2.2
SRP54-204ENST00000553923 IGKV1-9A0A0C4DH69 117 aa1.3□□□□□ -2.2
SRP54-204ENST00000553923 A0A1B0GU33 70 aa1.3□□□□□ -2.2
SRP54-204ENST00000553923 A0A1B0GW64 132 aa1.3□□□□□ -2.2
SRP54-204ENST00000553923 A0A1B0GX51 115 aa1.3□□□□□ -2.2
SRP54-204ENST00000553923 TMEM212A6NML5 194 aa1.3□□□□□ -2.2
SRP54-204ENST00000553923 H7C2G1 150 aa1.3□□□□□ -2.2
SRP54-204ENST00000553923 J3QR89 54 aa1.3□□□□□ -2.2
SRP54-204ENST00000553923 OR2H2O95918 312 aa1.3□□□□□ -2.2
SRP54-204ENST00000553923 MT-ND4LP03901 98 aa1.3□□□□□ -2.2
SRP54-204ENST00000553923 MSMBP08118 114 aa1.3□□□□□ -2.2
SRP54-204ENST00000553923 PAEPP09466 180 aa1.3□□□□□ -2.2
SRP54-204ENST00000553923 TRGC1P0CF51 173 aa1.3□□□□□ -2.2
SRP54-204ENST00000553923 ZNF728P0DKX0 622 aa1.3□□□□□ -2.2
SRP54-204ENST00000553923 CRYGAP11844 174 aa1.3□□□□□ -2.2
SRP54-204ENST00000553923 NFYAP23511 347 aaPredicted RBP1.3□□□□□ -2.2
SRP54-204ENST00000553923 PSMB8P28062 276 aa1.3□□□□□ -2.2
SRP54-204ENST00000553923 RAB5CP51148 216 aa1.3□□□□□ -2.2
SRP54-204ENST00000553923 MYL5Q02045 173 aa1.3□□□□□ -2.2
SRP54-204ENST00000553923 HES1Q14469 280 aa1.3□□□□□ -2.2
SRP54-204ENST00000553923 NEDD8Q15843 81 aa1.3□□□□□ -2.2
SRP54-204ENST00000553923 VMA21Q3ZAQ7 101 aa1.3□□□□□ -2.2
SRP54-204ENST00000553923 AMMECR1LQ6DCA0 310 aa1.3□□□□□ -2.2
SRP54-204ENST00000553923 SOSTDC1Q6X4U4 206 aa1.3□□□□□ -2.2
SRP54-204ENST00000553923 AAED1Q7RTV5 226 aa1.3□□□□□ -2.2
SRP54-204ENST00000553923 HMGN2P46Q86SG4 172 aa1.3□□□□□ -2.2
SRP54-204ENST00000553923 LRRC28Q86X40 367 aaPredicted RBP1.3□□□□□ -2.2
SRP54-204ENST00000553923 PRR15Q8IV56 129 aa1.3□□□□□ -2.2
SRP54-204ENST00000553923 PDZD9Q8IXQ8 264 aa1.3□□□□□ -2.2
SRP54-204ENST00000553923 C10orf126Q8N4M7 172 aa1.3□□□□□ -2.2
SRP54-204ENST00000553923 SLC30A7Q8NEW0 376 aa1.3□□□□□ -2.2
SRP54-204ENST00000553923 OR4X2Q8NGF9 303 aa1.3□□□□□ -2.2
SRP54-204ENST00000553923 OR51A4Q8NGJ6 313 aa1.3□□□□□ -2.2
SRP54-204ENST00000553923 RNF11Q9Y3C5 154 aa1.3□□□□□ -2.2
SRP54-204ENST00000553923 HSPE1-MOB4S4R3N1 261 aa1.3□□□□□ -2.2
SRP54-204ENST00000553923 ITGB4P16144 1822 aa1.3□□□□□ -2.2
SRP54-204ENST00000553923 PLXNB3Q9ULL4 1909 aa1.3□□□□□ -2.2
SRP54-204ENST00000553923 BCL9O00512 1426 aa1.3□□□□□ -2.2
SRP54-204ENST00000553923 NEO1Q92859 1461 aa1.3□□□□□ -2.2
SRP54-204ENST00000553923 KMT2EQ8IZD2 1858 aa1.29□□□□□ -2.2
SRP54-204ENST00000553923 TET2Q6N021 2002 aaPredicted RBP1.29□□□□□ -2.2
SRP54-204ENST00000553923 IGLV2-18A0A075B6J9 118 aa1.29□□□□□ -2.2
SRP54-204ENST00000553923 TRAV7A0A075B6U4 112 aa1.29□□□□□ -2.2
SRP54-204ENST00000553923 TRAV3A0A0B4J244 114 aa1.29□□□□□ -2.2
SRP54-204ENST00000553923 A0A0D9SEW6 157 aa1.29□□□□□ -2.2
SRP54-204ENST00000553923 A0A1B0GV90 55 aa1.29□□□□□ -2.2
SRP54-204ENST00000553923 A0A1B0GVG6 124 aa1.29□□□□□ -2.2
SRP54-204ENST00000553923 FAM25AB3EWG3 89 aa1.29□□□□□ -2.2
SRP54-204ENST00000553923 FAM25CB3EWG5 89 aa1.29□□□□□ -2.2
SRP54-204ENST00000553923 FAM25GB3EWG6 89 aa1.29□□□□□ -2.2
SRP54-204ENST00000553923 K7ERU9 68 aa1.29□□□□□ -2.2
SRP54-204ENST00000553923 PSCAO43653 123 aa1.29□□□□□ -2.2
SRP54-204ENST00000553923 SULT1C4O75897 302 aa1.29□□□□□ -2.2
SRP54-204ENST00000553923 TCL1BO95988 128 aa1.29□□□□□ -2.2
SRP54-204ENST00000553923 ZNF705BP0CI00 300 aaPredicted RBP1.29□□□□□ -2.2
SRP54-204ENST00000553923 MPC1LP0DKB6 136 aa1.29□□□□□ -2.2
SRP54-204ENST00000553923 GPX2P18283 190 aa1.29□□□□□ -2.2
SRP54-204ENST00000553923 CD24P25063 80 aa1.29□□□□□ -2.2
SRP54-204ENST00000553923 DYNLT1P63172 113 aa1.29□□□□□ -2.2
SRP54-204ENST00000553923 HBBP68871 147 aa1.29□□□□□ -2.2
SRP54-204ENST00000553923 FOXF1Q12946 379 aa1.29□□□□□ -2.2
Retrieved 100 of 20,778 RNA–protein pairs in 54.9 ms